RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 ROCK2O75116 1388 aaKnown RBP27.71■■■□□ 2.03
CROCCP4-202ENST00000633627 ARHGEF28Q8N1W1 1705 aaKnown RBP27.7■■■□□ 2.02
CROCCP4-202ENST00000633627 CADPS2Q86UW7 1296 aa27.68■■■□□ 2.02
CROCCP4-202ENST00000633627 POGKQ9P215 609 aa27.67■■■□□ 2.02
CROCCP4-202ENST00000633627 ATF3P18847 181 aa27.66■■■□□ 2.02
CROCCP4-202ENST00000633627 SAFB2Q14151 953 aaKnown RBP eCLIP27.64■■■□□ 2.02
CROCCP4-202ENST00000633627 SLAIN2Q9P270 581 aa27.64■■■□□ 2.02
CROCCP4-202ENST00000633627 CDC42BPGQ6DT37 1551 aa27.62■■■□□ 2.01
CROCCP4-202ENST00000633627 CARD11Q9BXL7 1154 aa27.62■■■□□ 2.01
CROCCP4-202ENST00000633627 MST1RQ04912 1400 aa27.6■■■□□ 2.01
CROCCP4-202ENST00000633627 PIP4K2BP78356 416 aa27.6■■■□□ 2.01
CROCCP4-202ENST00000633627 ILDR1Q86SU0 546 aaPredicted RBP27.59■■■□□ 2.01
CROCCP4-202ENST00000633627 ADGRB2O60241 1585 aa27.58■■■□□ 2.01
CROCCP4-202ENST00000633627 MINK1Q8N4C8 1332 aaPredicted RBP27.57■■■□□ 2
CROCCP4-202ENST00000633627 CENPJQ9HC77 1338 aaPredicted RBP27.57■■■□□ 2
CROCCP4-202ENST00000633627 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
CROCCP4-202ENST00000633627 C1orf167Q5SNV9 1468 aa27.54■■■□□ 2
CROCCP4-202ENST00000633627 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
CROCCP4-202ENST00000633627 EIF3AQ14152 1382 aaKnown RBP27.53■■■□□ 2
CROCCP4-202ENST00000633627 HIRIP3Q9BW71 556 aaPredicted RBP27.53■■■□□ 2
CROCCP4-202ENST00000633627 ROBO1Q9Y6N7 1651 aa27.52■■■□□ 2
CROCCP4-202ENST00000633627 QRICH2Q9H0J4 1663 aa27.5■■□□□ 1.99
CROCCP4-202ENST00000633627 WASLO00401 505 aaPredicted RBP27.5■■□□□ 1.99
CROCCP4-202ENST00000633627 BRINP3Q76B58 766 aa27.49■■□□□ 1.99
CROCCP4-202ENST00000633627 NUTM2FA1L443 756 aa27.46■■□□□ 1.99
CROCCP4-202ENST00000633627 ORAI2Q96SN7 254 aa27.45■■□□□ 1.98
CROCCP4-202ENST00000633627 SBNO2Q9Y2G9 1366 aa27.45■■□□□ 1.98
CROCCP4-202ENST00000633627 ANKARQ7Z5J8 1434 aa27.44■■□□□ 1.98
CROCCP4-202ENST00000633627 USP32Q8NFA0 1604 aa27.43■■□□□ 1.98
CROCCP4-202ENST00000633627 CDK19Q9BWU1 502 aa27.43■■□□□ 1.98
CROCCP4-202ENST00000633627 USP47Q96K76 1375 aa27.43■■□□□ 1.98
CROCCP4-202ENST00000633627 PRR36Q9H6K5 1346 aa27.42■■□□□ 1.98
CROCCP4-202ENST00000633627 TULP4Q9NRJ4 1543 aa27.42■■□□□ 1.98
CROCCP4-202ENST00000633627 HSPA1LP34931 641 aa27.42■■□□□ 1.98
CROCCP4-202ENST00000633627 RGPD8O14715 1765 aaPredicted RBP27.42■■□□□ 1.98
CROCCP4-202ENST00000633627 ST20-MTHFSA0A0A6YYL1 179 aa27.41■■□□□ 1.98
CROCCP4-202ENST00000633627 ESCO1Q5FWF5 840 aa27.4■■□□□ 1.98
CROCCP4-202ENST00000633627 TESK2Q96S53 571 aa27.39■■□□□ 1.98
CROCCP4-202ENST00000633627 AHDC1Q5TGY3 1603 aaPredicted RBP27.38■■□□□ 1.97
CROCCP4-202ENST00000633627 ATP7BP35670 1465 aa27.37■■□□□ 1.97
CROCCP4-202ENST00000633627 EVC2Q86UK5 1308 aa27.37■■□□□ 1.97
CROCCP4-202ENST00000633627 NUDT16Q96DE0 195 aaKnown RBP27.36■■□□□ 1.97
CROCCP4-202ENST00000633627 NHSL1Q5SYE7 1610 aa27.36■■□□□ 1.97
CROCCP4-202ENST00000633627 DDX17Q92841 729 aaKnown RBP27.34■■□□□ 1.97
CROCCP4-202ENST00000633627 CABP2Q9NPB3 220 aa27.34■■□□□ 1.97
CROCCP4-202ENST00000633627 PHF8Q9UPP1 1060 aa27.34■■□□□ 1.97
CROCCP4-202ENST00000633627 SRPK2P78362 688 aaKnown RBP27.33■■□□□ 1.97
CROCCP4-202ENST00000633627 PHLPP1O60346 1717 aa27.33■■□□□ 1.96
CROCCP4-202ENST00000633627 KIF1AQ12756 1690 aa27.32■■□□□ 1.96
CROCCP4-202ENST00000633627 COL16A1Q07092 1604 aaPredicted RBP27.31■■□□□ 1.96
CROCCP4-202ENST00000633627 CCDC61Q9Y6R9 512 aa27.31■■□□□ 1.96
CROCCP4-202ENST00000633627 FOXO3O43524 673 aa27.3■■□□□ 1.96
CROCCP4-202ENST00000633627 TOPAZ1Q8N9V7 1692 aa27.3■■□□□ 1.96
CROCCP4-202ENST00000633627 SLC24A1O60721 1099 aa27.29■■□□□ 1.96
CROCCP4-202ENST00000633627 EIF4G2P78344 907 aaKnown RBP eCLIP27.29■■□□□ 1.96
CROCCP4-202ENST00000633627 SOS2Q07890 1332 aaPredicted RBP27.29■■□□□ 1.96
CROCCP4-202ENST00000633627 NPHP3Q7Z494 1330 aa27.29■■□□□ 1.96
CROCCP4-202ENST00000633627 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
CROCCP4-202ENST00000633627 PMFBP1Q8TBY8 1022 aa27.28■■□□□ 1.96
CROCCP4-202ENST00000633627 PLEKHG3A1L390 1219 aa27.26■■□□□ 1.95
CROCCP4-202ENST00000633627 HSPA5P11021 654 aaKnown RBP27.26■■□□□ 1.95
CROCCP4-202ENST00000633627 PUS7Q96PZ0 661 aaKnown RBP27.25■■□□□ 1.95
CROCCP4-202ENST00000633627 PXDNQ92626 1479 aa27.25■■□□□ 1.95
CROCCP4-202ENST00000633627 ATAD2Q6PL18 1390 aa27.22■■□□□ 1.95
CROCCP4-202ENST00000633627 PPIP5K1Q6PFW1 1433 aa27.22■■□□□ 1.95
CROCCP4-202ENST00000633627 DISP3Q9P2K9 1392 aa27.22■■□□□ 1.95
CROCCP4-202ENST00000633627 TMF1P82094 1093 aa27.21■■□□□ 1.95
CROCCP4-202ENST00000633627 XPCQ01831 940 aaPredicted RBP27.21■■□□□ 1.95
CROCCP4-202ENST00000633627 LRRC59Q96AG4 307 aaKnown RBP27.21■■□□□ 1.95
CROCCP4-202ENST00000633627 POLR3AO14802 1390 aaPredicted RBP27.21■■□□□ 1.95
CROCCP4-202ENST00000633627 KRT28Q7Z3Y7 464 aa27.2■■□□□ 1.94
CROCCP4-202ENST00000633627 CABP1Q9NZU7 370 aa27.2■■□□□ 1.94
CROCCP4-202ENST00000633627 NGDNQ8NEJ9 315 aaKnown RBP27.19■■□□□ 1.94
CROCCP4-202ENST00000633627 ACEP12821 1306 aa27.18■■□□□ 1.94
CROCCP4-202ENST00000633627 PSME1Q06323 249 aa27.18■■□□□ 1.94
CROCCP4-202ENST00000633627 JCADQ9P266 1359 aa27.18■■□□□ 1.94
CROCCP4-202ENST00000633627 SBNO1A3KN83 1393 aa27.14■■□□□ 1.94
CROCCP4-202ENST00000633627 SPATA31A3Q5VYP0 1347 aa27.14■■□□□ 1.93
CROCCP4-202ENST00000633627 SHPRHQ149N8 1683 aa27.13■■□□□ 1.93
CROCCP4-202ENST00000633627 TRPM3Q9HCF6 1732 aaPredicted RBP27.13■■□□□ 1.93
CROCCP4-202ENST00000633627 PNPLA6Q8IY17 1366 aa27.12■■□□□ 1.93
CROCCP4-202ENST00000633627 ZEB1P37275 1124 aaPredicted RBP27.12■■□□□ 1.93
CROCCP4-202ENST00000633627 CDCA8Q53HL2 280 aa27.12■■□□□ 1.93
CROCCP4-202ENST00000633627 SLC12A5Q9H2X9 1139 aa27.1■■□□□ 1.93
CROCCP4-202ENST00000633627 CPSF1Q10570 1443 aaKnown RBP27.09■■□□□ 1.93
CROCCP4-202ENST00000633627 TNS3Q68CZ2 1445 aa27.09■■□□□ 1.93
CROCCP4-202ENST00000633627 TMC1Q8TDI8 760 aa27.08■■□□□ 1.93
CROCCP4-202ENST00000633627 NINLQ9Y2I6 1382 aa27.08■■□□□ 1.93
CROCCP4-202ENST00000633627 CD163L1Q9NR16 1453 aa27.07■■□□□ 1.92
CROCCP4-202ENST00000633627 ZNF692Q9BU19 519 aaPredicted RBP27.07■■□□□ 1.92
CROCCP4-202ENST00000633627 AKAP12Q02952 1782 aa27.07■■□□□ 1.92
CROCCP4-202ENST00000633627 USP6P35125 1406 aa27.07■■□□□ 1.92
CROCCP4-202ENST00000633627 SPATA31A6Q5VVP1 1343 aa27.06■■□□□ 1.92
CROCCP4-202ENST00000633627 BRD4O60885 1362 aaPredicted RBP27.06■■□□□ 1.92
CROCCP4-202ENST00000633627 SSH2Q76I76 1423 aa27.06■■□□□ 1.92
CROCCP4-202ENST00000633627 COL22A1Q8NFW1 1626 aaPredicted RBP27.05■■□□□ 1.92
CROCCP4-202ENST00000633627 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
CROCCP4-202ENST00000633627 C11orf95C9JLR9 678 aaPredicted RBP27.05■■□□□ 1.92
CROCCP4-202ENST00000633627 ARHGEF10O15013 1369 aa27.03■■□□□ 1.92
CROCCP4-202ENST00000633627 PAK3O75914 559 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms