RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
PHACTR4-206ENST00000632421 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
PHACTR4-206ENST00000632421 CGNL1Q0VF96 1302 aa16.15■□□□□ 0.18
PHACTR4-206ENST00000632421 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
PHACTR4-206ENST00000632421 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
PHACTR4-206ENST00000632421 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
PHACTR4-206ENST00000632421 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
PHACTR4-206ENST00000632421 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
PHACTR4-206ENST00000632421 SPATA31D1Q6ZQQ2 1576 aa16.14■□□□□ 0.17
PHACTR4-206ENST00000632421 PTPRMP28827 1452 aa16.14■□□□□ 0.17
PHACTR4-206ENST00000632421 YTHDC2Q9H6S0 1430 aaKnown RBP16.13■□□□□ 0.17
PHACTR4-206ENST00000632421 GOLGA2Q08379 1002 aa16.13■□□□□ 0.17
PHACTR4-206ENST00000632421 CABP2Q9NPB3 220 aa16.13■□□□□ 0.17
PHACTR4-206ENST00000632421 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
PHACTR4-206ENST00000632421 EXOC6Q8TAG9 804 aa16.12■□□□□ 0.17
PHACTR4-206ENST00000632421 NINLQ9Y2I6 1382 aa16.12■□□□□ 0.17
PHACTR4-206ENST00000632421 MLECQ14165 292 aa16.12■□□□□ 0.17
PHACTR4-206ENST00000632421 NSD2O96028 1365 aa16.11■□□□□ 0.17
PHACTR4-206ENST00000632421 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
PHACTR4-206ENST00000632421 APAF1O14727 1248 aa16.1■□□□□ 0.17
PHACTR4-206ENST00000632421 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
PHACTR4-206ENST00000632421 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
PHACTR4-206ENST00000632421 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
PHACTR4-206ENST00000632421 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
PHACTR4-206ENST00000632421 POGKQ9P215 609 aa16.1■□□□□ 0.17
PHACTR4-206ENST00000632421 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
PHACTR4-206ENST00000632421 SHPRHQ149N8 1683 aa16.09■□□□□ 0.17
PHACTR4-206ENST00000632421 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.17
PHACTR4-206ENST00000632421 SLFN5Q08AF3 891 aa16.08■□□□□ 0.17
PHACTR4-206ENST00000632421 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
PHACTR4-206ENST00000632421 PLIN1O60240 522 aa16.07■□□□□ 0.16
PHACTR4-206ENST00000632421 RIMS2Q9UQ26 1411 aa16.07■□□□□ 0.16
PHACTR4-206ENST00000632421 ERICH6Q7L0X2 663 aa16.07■□□□□ 0.16
PHACTR4-206ENST00000632421 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
PHACTR4-206ENST00000632421 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
PHACTR4-206ENST00000632421 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
PHACTR4-206ENST00000632421 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
PHACTR4-206ENST00000632421 MTHFSP49914 203 aa16.05■□□□□ 0.16
PHACTR4-206ENST00000632421 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
PHACTR4-206ENST00000632421 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
PHACTR4-206ENST00000632421 FANCIQ9NVI1 1328 aa16.04■□□□□ 0.16
PHACTR4-206ENST00000632421 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
PHACTR4-206ENST00000632421 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
PHACTR4-206ENST00000632421 E9PSI1 815 aa16.03■□□□□ 0.16
PHACTR4-206ENST00000632421 DLC1Q96QB1 1528 aa16.03■□□□□ 0.16
PHACTR4-206ENST00000632421 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
PHACTR4-206ENST00000632421 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.16
PHACTR4-206ENST00000632421 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.16
PHACTR4-206ENST00000632421 RUNDC1Q96C34 613 aa16.02■□□□□ 0.15
PHACTR4-206ENST00000632421 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
PHACTR4-206ENST00000632421 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.01■□□□□ 0.15
PHACTR4-206ENST00000632421 CDK19Q9BWU1 502 aa16.01■□□□□ 0.15
PHACTR4-206ENST00000632421 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
PHACTR4-206ENST00000632421 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
PHACTR4-206ENST00000632421 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
PHACTR4-206ENST00000632421 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
PHACTR4-206ENST00000632421 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
PHACTR4-206ENST00000632421 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
PHACTR4-206ENST00000632421 MED14O60244 1454 aa15.98■□□□□ 0.15
PHACTR4-206ENST00000632421 C20orf194Q5TEA3 1177 aa15.98■□□□□ 0.15
PHACTR4-206ENST00000632421 NRXN3Q9Y4C0 1643 aa15.98■□□□□ 0.15
PHACTR4-206ENST00000632421 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
PHACTR4-206ENST00000632421 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
PHACTR4-206ENST00000632421 TCP11L2Q8N4U5 519 aa15.97■□□□□ 0.15
PHACTR4-206ENST00000632421 TNRQ92752 1358 aa15.97■□□□□ 0.15
PHACTR4-206ENST00000632421 WAPLQ7Z5K2 1190 aa15.97■□□□□ 0.15
PHACTR4-206ENST00000632421 FYB1O15117 783 aa15.96■□□□□ 0.15
PHACTR4-206ENST00000632421 NLRP1Q9C000 1473 aa15.96■□□□□ 0.15
PHACTR4-206ENST00000632421 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
PHACTR4-206ENST00000632421 CABP1Q9NZU7 370 aa15.96■□□□□ 0.15
PHACTR4-206ENST00000632421 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
PHACTR4-206ENST00000632421 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
PHACTR4-206ENST00000632421 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
PHACTR4-206ENST00000632421 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
PHACTR4-206ENST00000632421 KIF20BQ96Q89 1820 aa15.94■□□□□ 0.14
PHACTR4-206ENST00000632421 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
PHACTR4-206ENST00000632421 METP08581 1390 aa15.94■□□□□ 0.14
PHACTR4-206ENST00000632421 ATP7BP35670 1465 aa15.93■□□□□ 0.14
PHACTR4-206ENST00000632421 TCERG1O14776 1098 aaKnown RBP15.93■□□□□ 0.14
PHACTR4-206ENST00000632421 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
PHACTR4-206ENST00000632421 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
PHACTR4-206ENST00000632421 WDR63Q8IWG1 891 aa15.92■□□□□ 0.14
PHACTR4-206ENST00000632421 COL3A1P02461 1466 aaPredicted RBP15.92■□□□□ 0.14
PHACTR4-206ENST00000632421 KNDC1Q76NI1 1749 aa15.92■□□□□ 0.14
PHACTR4-206ENST00000632421 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
PHACTR4-206ENST00000632421 BCAR3O75815 825 aa15.91■□□□□ 0.14
PHACTR4-206ENST00000632421 ADGRB2O60241 1585 aa15.91■□□□□ 0.14
PHACTR4-206ENST00000632421 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-206ENST00000632421 NBR1Q14596 966 aa15.9■□□□□ 0.14
PHACTR4-206ENST00000632421 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
PHACTR4-206ENST00000632421 WASLO00401 505 aaPredicted RBP15.9■□□□□ 0.14
PHACTR4-206ENST00000632421 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
PHACTR4-206ENST00000632421 TECPR2O15040 1411 aa15.89■□□□□ 0.13
PHACTR4-206ENST00000632421 TXNDC2Q86VQ3 553 aa15.89■□□□□ 0.13
PHACTR4-206ENST00000632421 U2SURPO15042 1029 aaKnown RBP15.89■□□□□ 0.13
PHACTR4-206ENST00000632421 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
PHACTR4-206ENST00000632421 CPS1P31327 1500 aa15.88■□□□□ 0.13
PHACTR4-206ENST00000632421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.13
PHACTR4-206ENST00000632421 MS4A1P11836 297 aa15.87■□□□□ 0.13
PHACTR4-206ENST00000632421 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms