RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	CABP4	P57796	275 aa		10.55	□□□□□ -0.72
SPTAN1-223	ENST00000630866	CFAP70	Q5T0N1	1121 aa		10.55	□□□□□ -0.72
SPTAN1-223	ENST00000630866	CCDC43	Q96MW1	224 aa	Known RBP	10.55	□□□□□ -0.72
SPTAN1-223	ENST00000630866	NEUROD6	Q96NK8	337 aa		10.55	□□□□□ -0.72
SPTAN1-223	ENST00000630866	RUNDC1	Q96C34	613 aa		10.54	□□□□□ -0.72
SPTAN1-223	ENST00000630866	NCOA2	Q15596	1464 aa		10.54	□□□□□ -0.72
SPTAN1-223	ENST00000630866	TRIM29	Q14134	588 aa		10.54	□□□□□ -0.72
SPTAN1-223	ENST00000630866	FYB1	O15117	783 aa		10.54	□□□□□ -0.72
SPTAN1-223	ENST00000630866	ZNF692	Q9BU19	519 aa	Predicted RBP	10.54	□□□□□ -0.72
SPTAN1-223	ENST00000630866	SPG7	Q9UQ90	795 aa		10.54	□□□□□ -0.72
SPTAN1-223	ENST00000630866	KIF21B	O75037	1637 aa		10.53	□□□□□ -0.72
SPTAN1-223	ENST00000630866	SET	Q01105	290 aa	Predicted RBP	10.53	□□□□□ -0.72
SPTAN1-223	ENST00000630866	HSP90AB4P	Q58FF6	505 aa		10.53	□□□□□ -0.72
SPTAN1-223	ENST00000630866	CDK19	Q9BWU1	502 aa		10.53	□□□□□ -0.72
SPTAN1-223	ENST00000630866	PES1	O00541	588 aa	Known RBP	10.53	□□□□□ -0.72
SPTAN1-223	ENST00000630866	HMGXB3	Q12766	1538 aa		10.52	□□□□□ -0.72
SPTAN1-223	ENST00000630866	TPD52L1	Q16890	204 aa	Predicted RBP	10.52	□□□□□ -0.72
SPTAN1-223	ENST00000630866	NFXL1	Q6ZNB6	911 aa		10.52	□□□□□ -0.72
SPTAN1-223	ENST00000630866	CD109	Q6YHK3	1445 aa		10.52	□□□□□ -0.72
SPTAN1-223	ENST00000630866	IK	Q13123	557 aa	Predicted RBP	10.52	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ZKSCAN1	P17029	563 aa	Predicted RBP	10.52	□□□□□ -0.73
SPTAN1-223	ENST00000630866	POLA1	P09884	1462 aa	Predicted RBP	10.52	□□□□□ -0.73
SPTAN1-223	ENST00000630866	CPLX1	O14810	134 aa		10.51	□□□□□ -0.73
SPTAN1-223	ENST00000630866	XPC	Q01831	940 aa	Predicted RBP	10.51	□□□□□ -0.73
SPTAN1-223	ENST00000630866	DNAJC5B	Q9UF47	199 aa		10.51	□□□□□ -0.73
SPTAN1-223	ENST00000630866	C9orf84	Q5VXU9	1444 aa		10.51	□□□□□ -0.73
SPTAN1-223	ENST00000630866	LRRC9	Q6ZRR7	1453 aa		10.51	□□□□□ -0.73
SPTAN1-223	ENST00000630866	DDX19B	Q9UMR2	479 aa		10.51	□□□□□ -0.73
SPTAN1-223	ENST00000630866	DNMBP	Q6XZF7	1577 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	PPM1F	P49593	454 aa	Predicted RBP	10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	SLK	Q9H2G2	1235 aa	Predicted RBP	10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	WASHC4	Q2M389	1173 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	CCDC30	Q5VVM6	783 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	MCTP1	Q6DN14	999 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ADAMTS2	O95450	1211 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	RNF20	Q5VTR2	975 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	LAMC3	Q9Y6N6	1575 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	HECW1	Q76N89	1606 aa		10.5	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ERC2	O15083	957 aa		10.49	□□□□□ -0.73
SPTAN1-223	ENST00000630866	UBTFL1	P0CB47	393 aa	Predicted RBP	10.49	□□□□□ -0.73
SPTAN1-223	ENST00000630866	NGLY1	Q96IV0	654 aa		10.49	□□□□□ -0.73
SPTAN1-223	ENST00000630866	FOXD4L1	Q9NU39	408 aa		10.49	□□□□□ -0.73
SPTAN1-223	ENST00000630866	MTHFS	P49914	203 aa		10.49	□□□□□ -0.73
SPTAN1-223	ENST00000630866	TPM2	P07951	284 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ARID3A	Q99856	593 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	TBC1D2B	Q9UPU7	963 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	TOM1	O60784	492 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	CNNM1	Q9NRU3	951 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	TRO	Q12816	1431 aa	Predicted RBP	10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ZC3H6	P61129	1189 aa	Known RBP	10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ANO2	Q9NQ90	1003 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	CABP1	Q9NZU7	370 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	CCDC47	Q96A33	483 aa	Known RBP	10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	COG6	Q9Y2V7	657 aa		10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	DZIP1L	Q8IYY4	767 aa	Known RBP	10.48	□□□□□ -0.73
SPTAN1-223	ENST00000630866	GNL3L	Q9NVN8	582 aa	Known RBP	10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	EFCAB5	A4FU69	1503 aa		10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	UBAP1L	F5GYI3	381 aa		10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	RALYL	Q86SE5	291 aa	Known RBP	10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	TSR1	Q2NL82	804 aa	Known RBP	10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.47	□□□□□ -0.73
SPTAN1-223	ENST00000630866	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	MTMR7	Q9Y216	660 aa		10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	HFM1	A2PYH4	1435 aa		10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	SYNJ1	O43426	1573 aa		10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	SLC4A3	P48751	1232 aa		10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	RBM5	P52756	815 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	EPRS	P07814	1512 aa	Known RBP	10.46	□□□□□ -0.73
SPTAN1-223	ENST00000630866	REC8	O95072	547 aa		10.46	□□□□□ -0.74
SPTAN1-223	ENST00000630866	RPGRIP1L	Q68CZ1	1315 aa		10.46	□□□□□ -0.74
SPTAN1-223	ENST00000630866	EHBP1L1	Q8N3D4	1523 aa		10.46	□□□□□ -0.74
SPTAN1-223	ENST00000630866	ERBIN	Q96RT1	1412 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	SLC3A2	P08195	630 aa	Known RBP	10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	PPP6R1	Q9UPN7	881 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	ATP6V1D	Q9Y5K8	247 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	SULT6B1	Q6IMI4	303 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	PNISR	Q8TF01	805 aa	Known RBP	10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	TPM3	P06753	285 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	MAP3K9	P80192	1104 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	KCNH5	Q8NCM2	988 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	WDHD1	O75717	1129 aa	Predicted RBP	10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	PRKAR2B	P31323	418 aa		10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.45	□□□□□ -0.74
SPTAN1-223	ENST00000630866	PHF14	O94880	888 aa		10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	GZF1	Q9H116	711 aa	Predicted RBP	10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	MPHOSPH8	Q99549	860 aa		10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	SAFB	Q15424	915 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	KIAA0586	Q9BVV6	1533 aa		10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	ERICH3	Q5RHP9	1530 aa		10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.44	□□□□□ -0.74
SPTAN1-223	ENST00000630866	BICDL1	Q6ZP65	573 aa		10.43	□□□□□ -0.74
SPTAN1-223	ENST00000630866	MYL6B	P14649	208 aa		10.43	□□□□□ -0.74
SPTAN1-223	ENST00000630866	HDGFL1	Q5TGJ6	251 aa		10.43	□□□□□ -0.74
SPTAN1-223	ENST00000630866	CEBPA	P49715	358 aa	Predicted RBP	10.43	□□□□□ -0.74
SPTAN1-223	ENST00000630866	CLASRP	Q8N2M8	674 aa	Known RBP	10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms