RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ERC2O15083 957 aa15.89■□□□□ 0.13
SYNGAP1-208ENST00000629380 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-208ENST00000629380 IFT57Q9NWB7 429 aa15.89■□□□□ 0.13
SYNGAP1-208ENST00000629380 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
SYNGAP1-208ENST00000629380 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
SYNGAP1-208ENST00000629380 PSME1Q06323 249 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 GSE1Q14687 1217 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 CFTRP13569 1480 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 E9PSI1 815 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 EZRP15311 586 aaKnown RBP15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 ZKSCAN2Q63HK3 967 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 MIA2Q96PC5 1412 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 CCDC39Q9UFE4 941 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 KIF21BO75037 1637 aa15.88■□□□□ 0.13
SYNGAP1-208ENST00000629380 EFCAB5A4FU69 1503 aa15.87■□□□□ 0.13
SYNGAP1-208ENST00000629380 LUC7LQ9NQ29 371 aaKnown RBP15.87■□□□□ 0.13
SYNGAP1-208ENST00000629380 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
SYNGAP1-208ENST00000629380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.13
SYNGAP1-208ENST00000629380 ANKRD45Q5TZF3 282 aa15.87■□□□□ 0.13
SYNGAP1-208ENST00000629380 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
SYNGAP1-208ENST00000629380 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
SYNGAP1-208ENST00000629380 AAMPQ13685 434 aa15.86■□□□□ 0.13
SYNGAP1-208ENST00000629380 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
SYNGAP1-208ENST00000629380 LETM1O95202 739 aaPredicted RBP15.86■□□□□ 0.13
SYNGAP1-208ENST00000629380 SMARCE1Q969G3 411 aa15.86■□□□□ 0.13
SYNGAP1-208ENST00000629380 FYCO1Q9BQS8 1478 aa15.85■□□□□ 0.13
SYNGAP1-208ENST00000629380 ZFYVE27Q5T4F4 411 aa15.85■□□□□ 0.13
SYNGAP1-208ENST00000629380 NUCB2P80303 420 aa15.85■□□□□ 0.13
SYNGAP1-208ENST00000629380 NUTM2DQ5VT03 806 aaPredicted RBP15.85■□□□□ 0.13
SYNGAP1-208ENST00000629380 HECW1Q76N89 1606 aa15.85■□□□□ 0.13
SYNGAP1-208ENST00000629380 RALYLQ86SE5 291 aaKnown RBP15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 SART3Q15020 963 aaKnown RBP15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 HSP90AB4PQ58FF6 505 aa15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 TEFQ10587 303 aa15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 IQCEQ6IPM2 695 aa15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 TXLNAP40222 546 aa15.84■□□□□ 0.13
SYNGAP1-208ENST00000629380 SLC3A2P08195 630 aaKnown RBP15.83■□□□□ 0.13
SYNGAP1-208ENST00000629380 SYCP1Q15431 976 aa15.83■□□□□ 0.12
SYNGAP1-208ENST00000629380 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
SYNGAP1-208ENST00000629380 LEKR1Q6ZMV7 388 aa15.83■□□□□ 0.12
SYNGAP1-208ENST00000629380 INTS3Q68E01 1043 aaKnown RBP15.83■□□□□ 0.12
SYNGAP1-208ENST00000629380 CLUAP1Q96AJ1 413 aa15.83■□□□□ 0.12
SYNGAP1-208ENST00000629380 RBM33Q96EV2 1170 aaKnown RBP15.83■□□□□ 0.12
SYNGAP1-208ENST00000629380 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 RRBP1Q9P2E9 1410 aaKnown RBP15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 PAF1Q8N7H5 531 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 CHMP5Q9NZZ3 219 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 MAGEC2Q9UBF1 373 aaPredicted RBP15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 TRAK1Q9UPV9 953 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 SMC3Q9UQE7 1217 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 MSH5O43196 834 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 FBXW7Q969H0 707 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.82■□□□□ 0.12
SYNGAP1-208ENST00000629380 PSMA5P28066 241 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 RABEP1Q15276 862 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 FAM13BQ9NYF5 915 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 KIAA0754O94854 1291 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 SEPT7Q16181 437 aaKnown RBP15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 IGF1RP08069 1367 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 CDK5RAP3Q96JB5 506 aa15.81■□□□□ 0.12
SYNGAP1-208ENST00000629380 LTV1Q96GA3 475 aaPredicted RBP15.8■□□□□ 0.12
SYNGAP1-208ENST00000629380 GPRASP1Q5JY77 1395 aa15.8■□□□□ 0.12
SYNGAP1-208ENST00000629380 TMEM132AQ24JP5 1023 aa15.8■□□□□ 0.12
SYNGAP1-208ENST00000629380 PDCP20941 246 aa15.8■□□□□ 0.12
SYNGAP1-208ENST00000629380 DESP17661 470 aa15.79■□□□□ 0.12
SYNGAP1-208ENST00000629380 VPS37CA5D8V6 355 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-208ENST00000629380 GBP2P32456 591 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-208ENST00000629380 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-208ENST00000629380 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
SYNGAP1-208ENST00000629380 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
SYNGAP1-208ENST00000629380 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
SYNGAP1-208ENST00000629380 KINO60870 393 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-208ENST00000629380 TRIM21P19474 475 aaKnown RBP15.78■□□□□ 0.12
SYNGAP1-208ENST00000629380 FOXD4L6Q3SYB3 417 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-208ENST00000629380 FOXD4L3Q6VB84 417 aaPredicted RBP15.78■□□□□ 0.12
SYNGAP1-208ENST00000629380 CASKIN1Q8WXD9 1431 aa15.77■□□□□ 0.12
SYNGAP1-208ENST00000629380 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
SYNGAP1-208ENST00000629380 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.12
SYNGAP1-208ENST00000629380 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.12
SYNGAP1-208ENST00000629380 NASPP49321 788 aaPredicted RBP15.77■□□□□ 0.12
SYNGAP1-208ENST00000629380 STIM1Q13586 685 aa15.77■□□□□ 0.12
SYNGAP1-208ENST00000629380 PDILTQ8N807 584 aa15.77■□□□□ 0.11
SYNGAP1-208ENST00000629380 TSPYL1Q9H0U9 437 aa15.77■□□□□ 0.11
SYNGAP1-208ENST00000629380 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 CCAR1Q8IX12 1150 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 FILIP1LQ4L180 1135 aa15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 SMG6Q86US8 1419 aaKnown RBP15.76■□□□□ 0.11
SYNGAP1-208ENST00000629380 API5Q9BZZ5 524 aaKnown RBP15.75■□□□□ 0.11
SYNGAP1-208ENST00000629380 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
SYNGAP1-208ENST00000629380 HIP1O00291 1037 aa15.75■□□□□ 0.11
SYNGAP1-208ENST00000629380 USP47Q96K76 1375 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms