RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 TBC1D2Q9BYX2 928 aa23.95■■□□□ 1.42
MECP2-218ENST00000629277 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
MECP2-218ENST00000629277 MAP3K4Q9Y6R4 1608 aa23.94■■□□□ 1.42
MECP2-218ENST00000629277 TMEM132EQ6IEE7 984 aa23.94■■□□□ 1.42
MECP2-218ENST00000629277 TBC1D32Q96NH3 1257 aa23.94■■□□□ 1.42
MECP2-218ENST00000629277 TET3O43151 1660 aa23.94■■□□□ 1.42
MECP2-218ENST00000629277 EIF5BO60841 1220 aaKnown RBP23.93■■□□□ 1.42
MECP2-218ENST00000629277 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
MECP2-218ENST00000629277 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
MECP2-218ENST00000629277 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
MECP2-218ENST00000629277 UPF2Q9HAU5 1272 aaKnown RBP23.91■■□□□ 1.42
MECP2-218ENST00000629277 KIAA1210Q9ULL0 1709 aa23.9■■□□□ 1.42
MECP2-218ENST00000629277 SLC24A1O60721 1099 aa23.9■■□□□ 1.42
MECP2-218ENST00000629277 MYOM2P54296 1465 aa23.9■■□□□ 1.42
MECP2-218ENST00000629277 NOS1P29475 1434 aa23.9■■□□□ 1.42
MECP2-218ENST00000629277 IQSEC2Q5JU85 1478 aa23.9■■□□□ 1.42
MECP2-218ENST00000629277 WDR63Q8IWG1 891 aa23.89■■□□□ 1.41
MECP2-218ENST00000629277 TSR2Q969E8 191 aaKnown RBP23.89■■□□□ 1.41
MECP2-218ENST00000629277 RWDD1Q9H446 243 aaPredicted RBP23.88■■□□□ 1.41
MECP2-218ENST00000629277 VWDEQ8N2E2 1590 aa23.87■■□□□ 1.41
MECP2-218ENST00000629277 ATP7AQ04656 1500 aa23.87■■□□□ 1.41
MECP2-218ENST00000629277 FAM43AQ8N2R8 423 aa23.87■■□□□ 1.41
MECP2-218ENST00000629277 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
MECP2-218ENST00000629277 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
MECP2-218ENST00000629277 MVPQ14764 893 aaKnown RBP23.85■■□□□ 1.41
MECP2-218ENST00000629277 NUTM2DQ5VT03 806 aaPredicted RBP23.85■■□□□ 1.41
MECP2-218ENST00000629277 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
MECP2-218ENST00000629277 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
MECP2-218ENST00000629277 MROH2AA6NES4 1674 aa23.84■■□□□ 1.41
MECP2-218ENST00000629277 MFAP1P55081 439 aaKnown RBP23.83■■□□□ 1.41
MECP2-218ENST00000629277 FTSJ3Q8IY81 847 aaKnown RBP23.83■■□□□ 1.41
MECP2-218ENST00000629277 GZF1Q9H116 711 aaPredicted RBP23.83■■□□□ 1.41
MECP2-218ENST00000629277 FANCAO15360 1455 aa23.83■■□□□ 1.4
MECP2-218ENST00000629277 ZNF518AQ6AHZ1 1483 aa23.82■■□□□ 1.4
MECP2-218ENST00000629277 MROH1Q8NDA8 1641 aa23.82■■□□□ 1.4
MECP2-218ENST00000629277 RRAGDQ9NQL2 400 aaPredicted RBP23.81■■□□□ 1.4
MECP2-218ENST00000629277 DZIP1LQ8IYY4 767 aaKnown RBP23.81■■□□□ 1.4
MECP2-218ENST00000629277 MYH16Q9H6N6 1097 aa23.81■■□□□ 1.4
MECP2-218ENST00000629277 ZKSCAN2Q63HK3 967 aa23.8■■□□□ 1.4
MECP2-218ENST00000629277 CFAP53Q96M91 514 aa23.8■■□□□ 1.4
MECP2-218ENST00000629277 NRXN1Q9ULB1 1477 aa23.8■■□□□ 1.4
MECP2-218ENST00000629277 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
MECP2-218ENST00000629277 AAMPQ13685 434 aa23.79■■□□□ 1.4
MECP2-218ENST00000629277 INO80Q9ULG1 1556 aaPredicted RBP23.79■■□□□ 1.4
MECP2-218ENST00000629277 EXOSC9Q06265 439 aaKnown RBP23.78■■□□□ 1.4
MECP2-218ENST00000629277 SAFB2Q14151 953 aaKnown RBP eCLIP23.78■■□□□ 1.4
MECP2-218ENST00000629277 C22orf23Q9BZE7 217 aa23.78■■□□□ 1.4
MECP2-218ENST00000629277 C14orf93Q9H972 538 aaKnown RBP23.78■■□□□ 1.4
MECP2-218ENST00000629277 SMC4Q9NTJ3 1288 aa23.78■■□□□ 1.4
MECP2-218ENST00000629277 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
MECP2-218ENST00000629277 TRIM27P14373 513 aa23.77■■□□□ 1.4
MECP2-218ENST00000629277 UHRF1BP1LA0JNW5 1464 aa23.77■■□□□ 1.4
MECP2-218ENST00000629277 KIF1BO60333 1816 aa23.77■■□□□ 1.39
MECP2-218ENST00000629277 ADGRL1O94910 1474 aa23.76■■□□□ 1.39
MECP2-218ENST00000629277 ITPRIPQ8IWB1 547 aa23.76■■□□□ 1.39
MECP2-218ENST00000629277 CABP2Q9NPB3 220 aa23.76■■□□□ 1.39
MECP2-218ENST00000629277 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
MECP2-218ENST00000629277 EFCAB6Q5THR3 1501 aa23.76■■□□□ 1.39
MECP2-218ENST00000629277 U2SURPO15042 1029 aaKnown RBP23.75■■□□□ 1.39
MECP2-218ENST00000629277 IFT172Q9UG01 1749 aa23.75■■□□□ 1.39
MECP2-218ENST00000629277 MCM4P33991 863 aa23.75■■□□□ 1.39
MECP2-218ENST00000629277 SSH1Q8WYL5 1049 aa23.75■■□□□ 1.39
MECP2-218ENST00000629277 PANK2Q9BZ23 570 aa23.75■■□□□ 1.39
MECP2-218ENST00000629277 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
MECP2-218ENST00000629277 XRCC6P12956 609 aaKnown RBP eCLIP23.74■■□□□ 1.39
MECP2-218ENST00000629277 GGT6Q6P531 493 aa23.73■■□□□ 1.39
MECP2-218ENST00000629277 L1TD1Q5T7N2 865 aaKnown RBP23.73■■□□□ 1.39
MECP2-218ENST00000629277 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
MECP2-218ENST00000629277 QRICH2Q9H0J4 1663 aa23.71■■□□□ 1.39
MECP2-218ENST00000629277 NOB1Q9ULX3 412 aaKnown RBP23.71■■□□□ 1.39
MECP2-218ENST00000629277 ARAP3Q8WWN8 1544 aa23.71■■□□□ 1.39
MECP2-218ENST00000629277 ADGRB1O14514 1584 aa23.71■■□□□ 1.39
MECP2-218ENST00000629277 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.38
MECP2-218ENST00000629277 TRIM35Q9UPQ4 493 aa23.7■■□□□ 1.38
MECP2-218ENST00000629277 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
MECP2-218ENST00000629277 ADGRB3O60242 1522 aa23.7■■□□□ 1.38
MECP2-218ENST00000629277 GOLGA6L3A6NEY3 463 aa23.69■■□□□ 1.38
MECP2-218ENST00000629277 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
MECP2-218ENST00000629277 TMEM57Q8N5G2 664 aa23.69■■□□□ 1.38
MECP2-218ENST00000629277 TMPOP42166 694 aaKnown RBP23.68■■□□□ 1.38
MECP2-218ENST00000629277 PLEKHF1Q96S99 279 aa23.68■■□□□ 1.38
MECP2-218ENST00000629277 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
MECP2-218ENST00000629277 ATF7IPQ6VMQ6 1270 aa23.68■■□□□ 1.38
MECP2-218ENST00000629277 SETBP1Q9Y6X0 1596 aa23.68■■□□□ 1.38
MECP2-218ENST00000629277 NPATQ14207 1427 aa23.67■■□□□ 1.38
MECP2-218ENST00000629277 HDAC1Q13547 482 aaPredicted RBP23.67■■□□□ 1.38
MECP2-218ENST00000629277 ABCA9Q8IUA7 1624 aa23.67■■□□□ 1.38
MECP2-218ENST00000629277 CHMP5Q9NZZ3 219 aa23.66■■□□□ 1.38
MECP2-218ENST00000629277 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
MECP2-218ENST00000629277 FSD2A1L4K1 749 aa23.66■■□□□ 1.38
MECP2-218ENST00000629277 TRAK2O60296 914 aa23.66■■□□□ 1.38
MECP2-218ENST00000629277 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
MECP2-218ENST00000629277 DDX19BQ9UMR2 479 aa23.65■■□□□ 1.38
MECP2-218ENST00000629277 ZC3H13Q5T200 1668 aaKnown RBP23.65■■□□□ 1.38
MECP2-218ENST00000629277 LNPKQ9C0E8 428 aa23.63■■□□□ 1.37
MECP2-218ENST00000629277 STK26Q9P289 416 aa23.63■■□□□ 1.37
MECP2-218ENST00000629277 TULP4Q9NRJ4 1543 aa23.63■■□□□ 1.37
MECP2-218ENST00000629277 SMC5Q8IY18 1101 aa23.62■■□□□ 1.37
MECP2-218ENST00000629277 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
MECP2-218ENST00000629277 RIPK4P57078 832 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms