RNA–Protein interactions for RNA: ENST00000628890.1

UBE3A-217, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-217ENST00000628890 CYP4X1Q8N118 509 aa10.15□□□□□ -0.78
UBE3A-217ENST00000628890 IRF6O14896 467 aa10.14□□□□□ -0.79
UBE3A-217ENST00000628890 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
UBE3A-217ENST00000628890 DACH1Q9UI36 760 aa10.14□□□□□ -0.79
UBE3A-217ENST00000628890 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
UBE3A-217ENST00000628890 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
UBE3A-217ENST00000628890 WNT7AO00755 349 aa10.12□□□□□ -0.79
UBE3A-217ENST00000628890 KDM4AO75164 1064 aa10.11□□□□□ -0.79
UBE3A-217ENST00000628890 DXOO77932 396 aaKnown RBP10.11□□□□□ -0.79
UBE3A-217ENST00000628890 MINK1Q8N4C8 1332 aaPredicted RBP10.1□□□□□ -0.79
UBE3A-217ENST00000628890 AXIN1O15169 862 aa10.1□□□□□ -0.79
UBE3A-217ENST00000628890 USB1Q9BQ65 265 aaKnown RBP10.1□□□□□ -0.79
UBE3A-217ENST00000628890 USP46P62068 366 aa10.09□□□□□ -0.79
UBE3A-217ENST00000628890 TRIM32Q13049 653 aa10.09□□□□□ -0.79
UBE3A-217ENST00000628890 SNIP1Q8TAD8 396 aaKnown RBP10.09□□□□□ -0.79
UBE3A-217ENST00000628890 SMPD1P17405 629 aa10.08□□□□□ -0.8
UBE3A-217ENST00000628890 GMPR2Q9P2T1 348 aaKnown RBP10.07□□□□□ -0.8
UBE3A-217ENST00000628890 TTC24A2A3L6 582 aaPredicted RBP10.06□□□□□ -0.8
UBE3A-217ENST00000628890 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
UBE3A-217ENST00000628890 MRGPRX2Q96LB1 330 aa10.05□□□□□ -0.8
UBE3A-217ENST00000628890 HOXA2O43364 376 aa10.04□□□□□ -0.8
UBE3A-217ENST00000628890 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
UBE3A-217ENST00000628890 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
UBE3A-217ENST00000628890 HLA-CQ95604 372 aa10.03□□□□□ -0.8
UBE3A-217ENST00000628890 J3QL48 77 aa10.01□□□□□ -0.81
UBE3A-217ENST00000628890 WNT7BP56706 349 aa10.01□□□□□ -0.81
UBE3A-217ENST00000628890 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
UBE3A-217ENST00000628890 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
UBE3A-217ENST00000628890 TULP1O00294 542 aaPredicted RBP10□□□□□ -0.81
UBE3A-217ENST00000628890 SKOR1P84550 965 aa10□□□□□ -0.81
UBE3A-217ENST00000628890 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
UBE3A-217ENST00000628890 CCDC102AQ96A19 550 aa10□□□□□ -0.81
UBE3A-217ENST00000628890 GPCPD1Q9NPB8 672 aa10□□□□□ -0.81
UBE3A-217ENST00000628890 CLCN1P35523 988 aa9.99□□□□□ -0.81
UBE3A-217ENST00000628890 NFX1Q12986 1120 aaKnown RBP9.99□□□□□ -0.81
UBE3A-217ENST00000628890 RC3H1Q5TC82 1133 aaKnown RBP9.99□□□□□ -0.81
UBE3A-217ENST00000628890 ATP13A2Q9NQ11 1180 aa9.99□□□□□ -0.81
UBE3A-217ENST00000628890 WFS1O76024 890 aa9.97□□□□□ -0.81
UBE3A-217ENST00000628890 JUNDP17535 347 aa9.97□□□□□ -0.81
UBE3A-217ENST00000628890 HPS1Q92902 700 aa9.97□□□□□ -0.81
UBE3A-217ENST00000628890 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
UBE3A-217ENST00000628890 CCDC24Q8N4L8 307 aa9.96□□□□□ -0.82
UBE3A-217ENST00000628890 RETREG3Q86VR2 466 aa9.95□□□□□ -0.82
UBE3A-217ENST00000628890 SYMPKQ92797 1274 aaKnown RBP9.95□□□□□ -0.82
UBE3A-217ENST00000628890 TRIM47Q96LD4 638 aa9.95□□□□□ -0.82
UBE3A-217ENST00000628890 SIAH2O43255 324 aa9.94□□□□□ -0.82
UBE3A-217ENST00000628890 WIPF1O43516 503 aa9.94□□□□□ -0.82
UBE3A-217ENST00000628890 SNRPBP14678 240 aaKnown RBP9.94□□□□□ -0.82
UBE3A-217ENST00000628890 PTCRAQ6ISU1 281 aaPredicted RBP9.94□□□□□ -0.82
UBE3A-217ENST00000628890 SENP2Q9HC62 589 aa9.94□□□□□ -0.82
UBE3A-217ENST00000628890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
UBE3A-217ENST00000628890 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
UBE3A-217ENST00000628890 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
UBE3A-217ENST00000628890 LCE2CQ5TA81 110 aa9.9□□□□□ -0.82
UBE3A-217ENST00000628890 KIFC2Q96AC6 838 aa9.9□□□□□ -0.82
UBE3A-217ENST00000628890 NUDT12Q9BQG2 462 aa9.9□□□□□ -0.82
UBE3A-217ENST00000628890 TERTO14746 1132 aaKnown RBP9.89□□□□□ -0.83
UBE3A-217ENST00000628890 FDX1P10109 184 aa9.89□□□□□ -0.83
UBE3A-217ENST00000628890 SSTR3P32745 418 aaPredicted RBP9.88□□□□□ -0.83
UBE3A-217ENST00000628890 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
UBE3A-217ENST00000628890 KRI1Q8N9T8 703 aaKnown RBP9.87□□□□□ -0.83
UBE3A-217ENST00000628890 SPIRE2Q8WWL2 714 aa9.87□□□□□ -0.83
UBE3A-217ENST00000628890 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
UBE3A-217ENST00000628890 CCNYL3P0C7X3 344 aa9.85□□□□□ -0.83
UBE3A-217ENST00000628890 SH3BP2P78314 561 aa9.85□□□□□ -0.83
UBE3A-217ENST00000628890 PTPRNQ16849 979 aa9.85□□□□□ -0.83
UBE3A-217ENST00000628890 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
UBE3A-217ENST00000628890 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
UBE3A-217ENST00000628890 MS4A1P11836 297 aa9.84□□□□□ -0.83
UBE3A-217ENST00000628890 DESI1Q6ICB0 168 aa9.84□□□□□ -0.83
UBE3A-217ENST00000628890 EHBP1Q8NDI1 1231 aa9.84□□□□□ -0.83
UBE3A-217ENST00000628890 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
UBE3A-217ENST00000628890 ZMYND10O75800 440 aa9.83□□□□□ -0.84
UBE3A-217ENST00000628890 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
UBE3A-217ENST00000628890 AMHR2Q16671 573 aa9.83□□□□□ -0.84
UBE3A-217ENST00000628890 MPNDQ8N594 471 aa9.83□□□□□ -0.84
UBE3A-217ENST00000628890 MOXD2PA6NHM9 499 aa9.82□□□□□ -0.84
UBE3A-217ENST00000628890 NDUFV2P19404 249 aa9.82□□□□□ -0.84
UBE3A-217ENST00000628890 GJA5P36382 358 aa9.82□□□□□ -0.84
UBE3A-217ENST00000628890 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
UBE3A-217ENST00000628890 KCNH2Q12809 1159 aa9.81□□□□□ -0.84
UBE3A-217ENST00000628890 TRIM46Q7Z4K8 759 aa9.81□□□□□ -0.84
UBE3A-217ENST00000628890 UNC93B1Q9H1C4 597 aa9.8□□□□□ -0.84
UBE3A-217ENST00000628890 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
UBE3A-217ENST00000628890 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
UBE3A-217ENST00000628890 BAP1Q92560 729 aa9.79□□□□□ -0.84
UBE3A-217ENST00000628890 NPAS3Q8IXF0 933 aa9.78□□□□□ -0.84
UBE3A-217ENST00000628890 WASF2Q9Y6W5 498 aa9.78□□□□□ -0.84
UBE3A-217ENST00000628890 VARSP26640 1264 aaKnown RBP9.77□□□□□ -0.85
UBE3A-217ENST00000628890 MTMR2Q13614 643 aa9.77□□□□□ -0.85
UBE3A-217ENST00000628890 NXF1Q9UBU9 619 aaKnown RBP9.77□□□□□ -0.85
UBE3A-217ENST00000628890 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
UBE3A-217ENST00000628890 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
UBE3A-217ENST00000628890 LYPD8Q6UX82 237 aa9.75□□□□□ -0.85
UBE3A-217ENST00000628890 ZC3H15Q8WU90 426 aaKnown RBP9.75□□□□□ -0.85
UBE3A-217ENST00000628890 BMP1P13497 986 aa9.74□□□□□ -0.85
UBE3A-217ENST00000628890 TTLL12Q14166 644 aaPredicted RBP9.74□□□□□ -0.85
UBE3A-217ENST00000628890 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
UBE3A-217ENST00000628890 BEGAINQ9BUH8 593 aa9.74□□□□□ -0.85
UBE3A-217ENST00000628890 PLEKHG3A1L390 1219 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms