RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 SLC26A8Q96RN1 970 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 RASSF4Q9H2L5 321 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 PANK3Q9H999 370 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 BCL2L12Q9HB09 334 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 MED4Q9NPJ6 270 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 TERF2IPQ9NYB0 399 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 DONSONQ9NYP3 566 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 CIZ1Q9ULV3 898 aaPredicted RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 TEX14Q8IWB6 1497 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 FYCO1Q9BQS8 1478 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 EPRSP07814 1512 aaKnown RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 KDM5CP41229 1560 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 REREQ9P2R6 1566 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 BRD4O60885 1362 aaPredicted RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 KANK1Q14678 1352 aa2.36□□□□□ -2.03
TCF4-264ENST00000628391 DHX29Q7Z478 1369 aaKnown RBP2.36□□□□□ -2.03
TCF4-264ENST00000628391 LRRC9Q6ZRR7 1453 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 SCAF11Q99590 1463 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 LOC102724159A0A0B4J2E5 919 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 GOLGA6L6A8MZA4 724 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 GOLGA6L22H0YM25 854 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 DHX16O60231 1041 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 IGSF3O75054 1194 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 REC8O95072 547 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 SLFN14P0C7P3 912 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 HSPA5P11021 654 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 LIG1P18858 919 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 CASQ1P31415 396 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 NOP2P46087 812 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 TDO2P48775 406 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 EIF4G2P78344 907 aaKnown RBP eCLIP2.35□□□□□ -2.03
TCF4-264ENST00000628391 RAD51AP2Q09MP3 1159 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 TRDNQ13061 729 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 OS9Q13438 667 aaPredicted RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 FKBP5Q13451 457 aaPredicted RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 PWP2Q15269 919 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 TERF2Q15554 542 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 CASC1Q6TDU7 716 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 CCDC91Q7Z6B0 441 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 GAS2L3Q86XJ1 694 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 KRT222Q8N1A0 295 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 GOLGA6L1Q8N7Z2 621 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 CHMP4CQ96CF2 233 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 TBC1D32Q96NH3 1257 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 TBC1D2Q9BYX2 928 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.35□□□□□ -2.039e-12■■■■■ 149.1
TCF4-264ENST00000628391 DIAPH3Q9NSV4 1193 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 RSPH14Q9UHP6 348 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 DDX41Q9UJV9 622 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 SH3BP1Q9Y3L3 701 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 KNSTRNQ9Y448 316 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 PCF11O94913 1555 aaKnown RBP2.35□□□□□ -2.03
TCF4-264ENST00000628391 PLEKHH1Q9ULM0 1364 aa2.35□□□□□ -2.03
TCF4-264ENST00000628391 BCORL1Q5H9F3 1711 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 PRXQ9BXM0 1461 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 ARHGAP35Q9NRY4 1499 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 RAD54L2Q9Y4B4 1467 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 FAM135AQ9P2D6 1515 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 KLHL33A6NCF5 533 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 IRF6O14896 467 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 PPP1R12AO14974 1030 aaPredicted RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 CTIFO43310 598 aaKnown RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 NRDCO43847 1150 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 PRR29P0C7W0 189 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 ZNF853P0CG23 659 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 TRHP20396 242 aaPredicted RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 U2AF2P26368 475 aaKnown RBP eCLIP2.34□□□□□ -2.03
TCF4-264ENST00000628391 CYP2C19P33261 490 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 DDIT3P35638 169 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 RPAINQ86UA6 219 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 HSCBQ8IWL3 235 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 TXLNBQ8N3L3 684 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 JMYQ8N9B5 988 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.34□□□□□ -2.03
TCF4-264ENST00000628391 PIBF1Q8WXW3 757 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 ITFG2Q969R8 447 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 ZBTB9Q96C00 473 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 SGSM3Q96HU1 749 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 CFAP44Q96MT7 982 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 FAM210AQ96ND0 272 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 CRBNQ96SW2 442 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 TACO1Q9BSH4 297 aaKnown RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 ZNF692Q9BU19 519 aaPredicted RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 HIRIP3Q9BW71 556 aaPredicted RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 NBPF3Q9H094 633 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 PRDM16Q9HAZ2 1276 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 SPINK5Q9NQ38 1064 aaPredicted RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 MRVI1Q9Y6F6 885 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 MORC2Q9Y6X9 1032 aaPredicted RBP2.34□□□□□ -2.03
TCF4-264ENST00000628391 SYNMO15061 1565 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 CFAP74Q9C0B2 1584 aa2.34□□□□□ -2.03
TCF4-264ENST00000628391 TOP2BQ02880 1626 aa2.34□□□□□ -2.04
TCF4-264ENST00000628391 ANKRD30AQ9BXX3 1397 aa2.34□□□□□ -2.04
TCF4-264ENST00000628391 KIF15Q9NS87 1388 aa2.34□□□□□ -2.04
TCF4-264ENST00000628391 FMN1Q68DA7 1419 aa2.34□□□□□ -2.04
TCF4-264ENST00000628391 SPATA31E1Q6ZUB1 1445 aa2.34□□□□□ -2.04
TCF4-264ENST00000628391 KIF27Q86VH2 1401 aa2.34□□□□□ -2.04
TCF4-264ENST00000628391 MBD5Q9P267 1494 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms