RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
CHRNA4-210ENST00000627869 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
CHRNA4-210ENST00000627869 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
CHRNA4-210ENST00000627869 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
CHRNA4-210ENST00000627869 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
CHRNA4-210ENST00000627869 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
CHRNA4-210ENST00000627869 LAMC1P11047 1609 aa17.28■□□□□ 0.36
CHRNA4-210ENST00000627869 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.36
CHRNA4-210ENST00000627869 ATRNO75882 1429 aa17.25■□□□□ 0.35
CHRNA4-210ENST00000627869 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
CHRNA4-210ENST00000627869 USP21Q9UK80 565 aa17.24■□□□□ 0.35
CHRNA4-210ENST00000627869 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
CHRNA4-210ENST00000627869 PPLO60437 1756 aa17.23■□□□□ 0.35
CHRNA4-210ENST00000627869 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
CHRNA4-210ENST00000627869 STK26Q9P289 416 aa17.23■□□□□ 0.35
CHRNA4-210ENST00000627869 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
CHRNA4-210ENST00000627869 TRPC5Q9UL62 973 aaPredicted RBP17.21■□□□□ 0.35
CHRNA4-210ENST00000627869 PIK3C2GO75747 1445 aa17.21■□□□□ 0.34
CHRNA4-210ENST00000627869 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
CHRNA4-210ENST00000627869 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
CHRNA4-210ENST00000627869 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
CHRNA4-210ENST00000627869 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
CHRNA4-210ENST00000627869 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
CHRNA4-210ENST00000627869 ABCC11Q96J66 1382 aa17.18■□□□□ 0.34
CHRNA4-210ENST00000627869 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
CHRNA4-210ENST00000627869 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
CHRNA4-210ENST00000627869 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
CHRNA4-210ENST00000627869 TECPR2O15040 1411 aa17.17■□□□□ 0.34
CHRNA4-210ENST00000627869 MYOM2P54296 1465 aa17.17■□□□□ 0.34
CHRNA4-210ENST00000627869 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
CHRNA4-210ENST00000627869 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
CHRNA4-210ENST00000627869 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
CHRNA4-210ENST00000627869 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
CHRNA4-210ENST00000627869 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
CHRNA4-210ENST00000627869 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
CHRNA4-210ENST00000627869 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
CHRNA4-210ENST00000627869 GLI3P10071 1580 aa17.12■□□□□ 0.33
CHRNA4-210ENST00000627869 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
CHRNA4-210ENST00000627869 PLEKHH1Q9ULM0 1364 aa17.12■□□□□ 0.33
CHRNA4-210ENST00000627869 LRP5O75197 1615 aa17.11■□□□□ 0.33
CHRNA4-210ENST00000627869 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
CHRNA4-210ENST00000627869 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
CHRNA4-210ENST00000627869 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
CHRNA4-210ENST00000627869 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
CHRNA4-210ENST00000627869 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
CHRNA4-210ENST00000627869 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
CHRNA4-210ENST00000627869 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
CHRNA4-210ENST00000627869 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
CHRNA4-210ENST00000627869 PXDNQ92626 1479 aa17.1■□□□□ 0.33
CHRNA4-210ENST00000627869 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
CHRNA4-210ENST00000627869 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
CHRNA4-210ENST00000627869 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.09■□□□□ 0.33
CHRNA4-210ENST00000627869 PRAM1Q96QH2 718 aa17.08■□□□□ 0.32
CHRNA4-210ENST00000627869 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
CHRNA4-210ENST00000627869 FOXO3O43524 673 aa17.07■□□□□ 0.32
CHRNA4-210ENST00000627869 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHRNA4-210ENST00000627869 POGKQ9P215 609 aa17.06■□□□□ 0.32
CHRNA4-210ENST00000627869 SLIT2O94813 1529 aa17.05■□□□□ 0.32
CHRNA4-210ENST00000627869 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
CHRNA4-210ENST00000627869 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
CHRNA4-210ENST00000627869 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
CHRNA4-210ENST00000627869 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
CHRNA4-210ENST00000627869 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
CHRNA4-210ENST00000627869 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
CHRNA4-210ENST00000627869 ADGRB1O14514 1584 aa17■□□□□ 0.31
CHRNA4-210ENST00000627869 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
CHRNA4-210ENST00000627869 PHF8Q9UPP1 1060 aa16.99■□□□□ 0.31
CHRNA4-210ENST00000627869 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
CHRNA4-210ENST00000627869 USP32Q8NFA0 1604 aa16.97■□□□□ 0.31
CHRNA4-210ENST00000627869 PSME1Q06323 249 aa16.97■□□□□ 0.31
CHRNA4-210ENST00000627869 SEPT12Q8IYM1 358 aa16.97■□□□□ 0.31
CHRNA4-210ENST00000627869 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
CHRNA4-210ENST00000627869 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
CHRNA4-210ENST00000627869 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
CHRNA4-210ENST00000627869 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
CHRNA4-210ENST00000627869 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
CHRNA4-210ENST00000627869 EIF3AQ14152 1382 aaKnown RBP16.94■□□□□ 0.3
CHRNA4-210ENST00000627869 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
CHRNA4-210ENST00000627869 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
CHRNA4-210ENST00000627869 WASLO00401 505 aaPredicted RBP16.93■□□□□ 0.3
CHRNA4-210ENST00000627869 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
CHRNA4-210ENST00000627869 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
CHRNA4-210ENST00000627869 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
CHRNA4-210ENST00000627869 VPS72Q15906 364 aa16.91■□□□□ 0.3
CHRNA4-210ENST00000627869 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
CHRNA4-210ENST00000627869 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
CHRNA4-210ENST00000627869 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
CHRNA4-210ENST00000627869 KRT27Q7Z3Y8 459 aa16.9■□□□□ 0.3
CHRNA4-210ENST00000627869 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
CHRNA4-210ENST00000627869 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
CHRNA4-210ENST00000627869 ADGRB2O60241 1585 aa16.89■□□□□ 0.3
CHRNA4-210ENST00000627869 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
CHRNA4-210ENST00000627869 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
CHRNA4-210ENST00000627869 CABLES1Q8TDN4 633 aa16.89■□□□□ 0.29
CHRNA4-210ENST00000627869 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
CHRNA4-210ENST00000627869 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
CHRNA4-210ENST00000627869 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
CHRNA4-210ENST00000627869 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
CHRNA4-210ENST00000627869 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
CHRNA4-210ENST00000627869 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms