RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
SOX2-OT-244ENST00000627738 C3P01024 1663 aa13.9□□□□□ -0.18
SOX2-OT-244ENST00000627738 A2ML1A8K2U0 1454 aa13.89□□□□□ -0.19
SOX2-OT-244ENST00000627738 ST20-MTHFSA0A0A6YYL1 179 aa13.89□□□□□ -0.19
SOX2-OT-244ENST00000627738 C11orf95C9JLR9 678 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-244ENST00000627738 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-244ENST00000627738 PIK3C2GO75747 1445 aa13.89□□□□□ -0.19
SOX2-OT-244ENST00000627738 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
SOX2-OT-244ENST00000627738 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
SOX2-OT-244ENST00000627738 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-244ENST00000627738 C14orf93Q9H972 538 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-244ENST00000627738 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
SOX2-OT-244ENST00000627738 ADAMTSL3P82987 1691 aa13.86□□□□□ -0.19
SOX2-OT-244ENST00000627738 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-244ENST00000627738 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
SOX2-OT-244ENST00000627738 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-244ENST00000627738 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
SOX2-OT-244ENST00000627738 KIF7Q2M1P5 1343 aa13.85□□□□□ -0.19
SOX2-OT-244ENST00000627738 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
SOX2-OT-244ENST00000627738 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.19
SOX2-OT-244ENST00000627738 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-244ENST00000627738 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
SOX2-OT-244ENST00000627738 KDM5AP29375 1690 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-244ENST00000627738 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
SOX2-OT-244ENST00000627738 TMEM132EQ6IEE7 984 aa13.81□□□□□ -0.2
SOX2-OT-244ENST00000627738 MS4A3Q96HJ5 214 aa13.81□□□□□ -0.2
SOX2-OT-244ENST00000627738 TESK2Q96S53 571 aa13.81□□□□□ -0.2
SOX2-OT-244ENST00000627738 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-244ENST00000627738 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
SOX2-OT-244ENST00000627738 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
SOX2-OT-244ENST00000627738 TMEM2Q9UHN6 1383 aa13.8□□□□□ -0.2
SOX2-OT-244ENST00000627738 HDGFP51858 240 aaKnown RBP13.79□□□□□ -0.2
SOX2-OT-244ENST00000627738 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
SOX2-OT-244ENST00000627738 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
SOX2-OT-244ENST00000627738 MYO3AQ8NEV4 1616 aa13.78□□□□□ -0.2
SOX2-OT-244ENST00000627738 GSE1Q14687 1217 aa13.77□□□□□ -0.21
SOX2-OT-244ENST00000627738 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
SOX2-OT-244ENST00000627738 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
SOX2-OT-244ENST00000627738 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
SOX2-OT-244ENST00000627738 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
SOX2-OT-244ENST00000627738 NUBP1P53384 320 aa13.76□□□□□ -0.21
SOX2-OT-244ENST00000627738 TMF1P82094 1093 aa13.76□□□□□ -0.21
SOX2-OT-244ENST00000627738 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
SOX2-OT-244ENST00000627738 PTPRMP28827 1452 aa13.74□□□□□ -0.21
SOX2-OT-244ENST00000627738 TXNDC2Q86VQ3 553 aa13.74□□□□□ -0.21
SOX2-OT-244ENST00000627738 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-244ENST00000627738 CEP170BQ9Y4F5 1589 aaPredicted RBP13.74□□□□□ -0.21
SOX2-OT-244ENST00000627738 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 NRXN3Q9Y4C0 1643 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 RGL2O15211 777 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 LTKP29376 864 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 BCANQ96GW7 911 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 STK26Q9P289 416 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 SLIT1O75093 1534 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
SOX2-OT-244ENST00000627738 ANP32CO43423 234 aa13.72□□□□□ -0.21
SOX2-OT-244ENST00000627738 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
SOX2-OT-244ENST00000627738 EID1Q9Y6B2 187 aa13.72□□□□□ -0.21
SOX2-OT-244ENST00000627738 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-244ENST00000627738 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-244ENST00000627738 ARHGEF28Q8N1W1 1705 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-244ENST00000627738 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
SOX2-OT-244ENST00000627738 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
SOX2-OT-244ENST00000627738 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.22
SOX2-OT-244ENST00000627738 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
SOX2-OT-244ENST00000627738 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
SOX2-OT-244ENST00000627738 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
SOX2-OT-244ENST00000627738 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
SOX2-OT-244ENST00000627738 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
SOX2-OT-244ENST00000627738 SETD1BQ9UPS6 1966 aaKnown RBP13.69□□□□□ -0.22
SOX2-OT-244ENST00000627738 ADAMTS13Q76LX8 1427 aa13.68□□□□□ -0.22
SOX2-OT-244ENST00000627738 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-244ENST00000627738 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
SOX2-OT-244ENST00000627738 METP08581 1390 aa13.68□□□□□ -0.22
SOX2-OT-244ENST00000627738 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-244ENST00000627738 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
SOX2-OT-244ENST00000627738 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
SOX2-OT-244ENST00000627738 POGKQ9P215 609 aa13.66□□□□□ -0.22
SOX2-OT-244ENST00000627738 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
SOX2-OT-244ENST00000627738 DLC1Q96QB1 1528 aa13.65□□□□□ -0.22
SOX2-OT-244ENST00000627738 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
SOX2-OT-244ENST00000627738 MED14O60244 1454 aa13.65□□□□□ -0.22
SOX2-OT-244ENST00000627738 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
SOX2-OT-244ENST00000627738 SLC26A8Q96RN1 970 aa13.64□□□□□ -0.23
SOX2-OT-244ENST00000627738 ANKLE2Q86XL3 938 aa13.63□□□□□ -0.23
SOX2-OT-244ENST00000627738 PANK3Q9H999 370 aa13.63□□□□□ -0.23
SOX2-OT-244ENST00000627738 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
SOX2-OT-244ENST00000627738 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 PRKRIP1Q9H875 184 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 TBX22Q9Y458 520 aa13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-244ENST00000627738 KNDC1Q76NI1 1749 aa13.61□□□□□ -0.23
SOX2-OT-244ENST00000627738 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
SOX2-OT-244ENST00000627738 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
SOX2-OT-244ENST00000627738 TECPR2O15040 1411 aa13.61□□□□□ -0.23
SOX2-OT-244ENST00000627738 MYOM1P52179 1685 aa13.6□□□□□ -0.23
SOX2-OT-244ENST00000627738 C7P10643 843 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms