RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 ZCCHC11Q5TAX3 1644 aaKnown RBP11.59□□□□□ -0.55
CHD2-209ENST00000627185 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
CHD2-209ENST00000627185 C7P10643 843 aa11.58□□□□□ -0.56
CHD2-209ENST00000627185 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
CHD2-209ENST00000627185 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
CHD2-209ENST00000627185 BRD4O60885 1362 aaPredicted RBP11.57□□□□□ -0.56
CHD2-209ENST00000627185 SEC24BO95487 1268 aa11.57□□□□□ -0.56
CHD2-209ENST00000627185 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD2-209ENST00000627185 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
CHD2-209ENST00000627185 ERCC6L2Q5T890 1561 aa11.57□□□□□ -0.56
CHD2-209ENST00000627185 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
CHD2-209ENST00000627185 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
CHD2-209ENST00000627185 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
CHD2-209ENST00000627185 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
CHD2-209ENST00000627185 E9PCH4 1651 aa11.56□□□□□ -0.56
CHD2-209ENST00000627185 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
CHD2-209ENST00000627185 A2MP01023 1474 aa11.56□□□□□ -0.56
CHD2-209ENST00000627185 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
CHD2-209ENST00000627185 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
CHD2-209ENST00000627185 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
CHD2-209ENST00000627185 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
CHD2-209ENST00000627185 MRS2Q9HD23 443 aa11.55□□□□□ -0.56
CHD2-209ENST00000627185 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
CHD2-209ENST00000627185 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
CHD2-209ENST00000627185 G3V3G9 751 aa11.54□□□□□ -0.56
CHD2-209ENST00000627185 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
CHD2-209ENST00000627185 TRPM2O94759 1503 aa11.54□□□□□ -0.56
CHD2-209ENST00000627185 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
CHD2-209ENST00000627185 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
CHD2-209ENST00000627185 RNF17Q9BXT8 1623 aaKnown RBP11.53□□□□□ -0.56
CHD2-209ENST00000627185 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
CHD2-209ENST00000627185 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
CHD2-209ENST00000627185 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
CHD2-209ENST00000627185 INO80Q9ULG1 1556 aaPredicted RBP11.52□□□□□ -0.57
CHD2-209ENST00000627185 PARD3Q8TEW0 1356 aa11.52□□□□□ -0.57
CHD2-209ENST00000627185 TRAPPC8Q9Y2L5 1435 aa11.52□□□□□ -0.57
CHD2-209ENST00000627185 LMTK2Q8IWU2 1503 aa11.51□□□□□ -0.57
CHD2-209ENST00000627185 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
CHD2-209ENST00000627185 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
CHD2-209ENST00000627185 ST20-MTHFSA0A0A6YYL1 179 aa11.5□□□□□ -0.57
CHD2-209ENST00000627185 CCDC184Q52MB2 194 aa11.5□□□□□ -0.57
CHD2-209ENST00000627185 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
CHD2-209ENST00000627185 TESK2Q96S53 571 aa11.5□□□□□ -0.57
CHD2-209ENST00000627185 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
CHD2-209ENST00000627185 KIF3CO14782 793 aa11.49□□□□□ -0.57
CHD2-209ENST00000627185 PER1O15534 1290 aaPredicted RBP11.49□□□□□ -0.57
CHD2-209ENST00000627185 SPAG9O60271 1321 aaKnown RBP11.49□□□□□ -0.57
CHD2-209ENST00000627185 NPC1L1Q9UHC9 1359 aa11.49□□□□□ -0.57
CHD2-209ENST00000627185 TET3O43151 1660 aa11.49□□□□□ -0.57
CHD2-209ENST00000627185 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
CHD2-209ENST00000627185 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
CHD2-209ENST00000627185 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
CHD2-209ENST00000627185 FOXK1P85037 733 aa11.47□□□□□ -0.57
CHD2-209ENST00000627185 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
CHD2-209ENST00000627185 DSG2Q14126 1118 aa11.47□□□□□ -0.57
CHD2-209ENST00000627185 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
CHD2-209ENST00000627185 FANCAO15360 1455 aa11.46□□□□□ -0.57
CHD2-209ENST00000627185 MYOM2P54296 1465 aa11.46□□□□□ -0.57
CHD2-209ENST00000627185 KANK1Q14678 1352 aa11.46□□□□□ -0.57
CHD2-209ENST00000627185 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
CHD2-209ENST00000627185 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
CHD2-209ENST00000627185 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
CHD2-209ENST00000627185 SBNO2Q9Y2G9 1366 aa11.44□□□□□ -0.58
CHD2-209ENST00000627185 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
CHD2-209ENST00000627185 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
CHD2-209ENST00000627185 MADDQ8WXG6 1647 aa11.44□□□□□ -0.58
CHD2-209ENST00000627185 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
CHD2-209ENST00000627185 MLH3Q9UHC1 1453 aa11.44□□□□□ -0.58
CHD2-209ENST00000627185 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
CHD2-209ENST00000627185 TMF1P82094 1093 aa11.43□□□□□ -0.58
CHD2-209ENST00000627185 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
CHD2-209ENST00000627185 TMC1Q8TDI8 760 aa11.43□□□□□ -0.58
CHD2-209ENST00000627185 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
CHD2-209ENST00000627185 CEP152O94986 1710 aa11.43□□□□□ -0.58
CHD2-209ENST00000627185 SPHKAPQ2M3C7 1700 aa11.43□□□□□ -0.58
CHD2-209ENST00000627185 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
CHD2-209ENST00000627185 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
CHD2-209ENST00000627185 IQGAP1P46940 1657 aa11.42□□□□□ -0.58
CHD2-209ENST00000627185 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
CHD2-209ENST00000627185 ADGRL1O94910 1474 aa11.41□□□□□ -0.58
CHD2-209ENST00000627185 ZNF326Q5BKZ1 582 aaKnown RBP11.41□□□□□ -0.58
CHD2-209ENST00000627185 ASXL2Q76L83 1435 aa11.41□□□□□ -0.58
CHD2-209ENST00000627185 NBPF1Q3BBV0 1214 aa11.4□□□□□ -0.58
CHD2-209ENST00000627185 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
CHD2-209ENST00000627185 EIF3AQ14152 1382 aaKnown RBP11.4□□□□□ -0.59
CHD2-209ENST00000627185 EFCAB6Q5THR3 1501 aa11.4□□□□□ -0.59
CHD2-209ENST00000627185 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
CHD2-209ENST00000627185 SYNMO15061 1565 aa11.39□□□□□ -0.59
CHD2-209ENST00000627185 BLMP54132 1417 aaPredicted RBP11.39□□□□□ -0.59
CHD2-209ENST00000627185 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
CHD2-209ENST00000627185 NEO1Q92859 1461 aa11.38□□□□□ -0.59
CHD2-209ENST00000627185 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
CHD2-209ENST00000627185 SEMA3EO15041 775 aa11.38□□□□□ -0.59
CHD2-209ENST00000627185 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
CHD2-209ENST00000627185 AFAP1Q8N556 730 aa11.38□□□□□ -0.59
CHD2-209ENST00000627185 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
CHD2-209ENST00000627185 DISP3Q9P2K9 1392 aa11.38□□□□□ -0.59
CHD2-209ENST00000627185 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
CHD2-209ENST00000627185 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
CHD2-209ENST00000627185 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms