RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 IQGAP2Q13576 1575 aa11.44□□□□□ -0.58
SMN2-214ENST00000626847 LTBP4Q8N2S1 1624 aa11.44□□□□□ -0.58
SMN2-214ENST00000626847 PHLDB1Q86UU1 1377 aa11.43□□□□□ -0.58
SMN2-214ENST00000626847 A0A0U1RQG5 324 aaPredicted RBP11.43□□□□□ -0.58
SMN2-214ENST00000626847 IFFO2Q5TF58 517 aa11.43□□□□□ -0.58
SMN2-214ENST00000626847 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
SMN2-214ENST00000626847 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
SMN2-214ENST00000626847 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
SMN2-214ENST00000626847 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
SMN2-214ENST00000626847 PTPRTO14522 1441 aa11.4□□□□□ -0.58
SMN2-214ENST00000626847 FECHP22830 423 aa11.39□□□□□ -0.59
SMN2-214ENST00000626847 FAM117AQ9C073 453 aa11.39□□□□□ -0.59
SMN2-214ENST00000626847 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
SMN2-214ENST00000626847 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
SMN2-214ENST00000626847 AMHR2Q16671 573 aa11.38□□□□□ -0.59
SMN2-214ENST00000626847 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
SMN2-214ENST00000626847 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
SMN2-214ENST00000626847 ARID3AQ99856 593 aa11.38□□□□□ -0.59
SMN2-214ENST00000626847 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.38□□□□□ -0.59
SMN2-214ENST00000626847 POGZQ7Z3K3 1410 aa11.38□□□□□ -0.59
SMN2-214ENST00000626847 PREX1Q8TCU6 1659 aa11.37□□□□□ -0.59
SMN2-214ENST00000626847 LOC105371045A0A1W2PR82 267 aa11.37□□□□□ -0.59
SMN2-214ENST00000626847 PTGDRQ13258 359 aa11.37□□□□□ -0.59
SMN2-214ENST00000626847 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
SMN2-214ENST00000626847 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
SMN2-214ENST00000626847 KIAA0556O60303 1618 aa11.36□□□□□ -0.59
SMN2-214ENST00000626847 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
SMN2-214ENST00000626847 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 SLC34A2O95436 690 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
SMN2-214ENST00000626847 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 FANCAO15360 1455 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 NEO1Q92859 1461 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
SMN2-214ENST00000626847 MAP3K7O43318 606 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 EPAS1Q99814 870 aa11.35□□□□□ -0.59
SMN2-214ENST00000626847 RBM19Q9Y4C8 960 aaKnown RBP11.35□□□□□ -0.59
SMN2-214ENST00000626847 SIGLEC1Q9BZZ2 1709 aa11.34□□□□□ -0.59
SMN2-214ENST00000626847 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
SMN2-214ENST00000626847 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
SMN2-214ENST00000626847 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
SMN2-214ENST00000626847 PHF14O94880 888 aa11.33□□□□□ -0.6
SMN2-214ENST00000626847 MLECQ14165 292 aa11.33□□□□□ -0.6
SMN2-214ENST00000626847 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
SMN2-214ENST00000626847 FER1L4A9Z1Z3 1794 aa11.32□□□□□ -0.6
SMN2-214ENST00000626847 CEBPAP49715 358 aaPredicted RBP11.32□□□□□ -0.6
SMN2-214ENST00000626847 EN1Q05925 392 aaPredicted RBP11.32□□□□□ -0.6
SMN2-214ENST00000626847 ABCA9Q8IUA7 1624 aa11.32□□□□□ -0.6
SMN2-214ENST00000626847 ABCA8O94911 1581 aa11.31□□□□□ -0.6
SMN2-214ENST00000626847 UHRF1BP1Q6BDS2 1440 aa11.31□□□□□ -0.6
SMN2-214ENST00000626847 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
SMN2-214ENST00000626847 IPO4Q8TEX9 1081 aaKnown RBP11.31□□□□□ -0.6
SMN2-214ENST00000626847 NCLP19338 710 aaKnown RBP11.3□□□□□ -0.6
SMN2-214ENST00000626847 HSPA1LP34931 641 aa11.3□□□□□ -0.6
SMN2-214ENST00000626847 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
SMN2-214ENST00000626847 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
SMN2-214ENST00000626847 RRP9O43818 475 aaKnown RBP11.28□□□□□ -0.6
SMN2-214ENST00000626847 NAP1L2Q9ULW6 460 aaPredicted RBP11.28□□□□□ -0.6
SMN2-214ENST00000626847 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
SMN2-214ENST00000626847 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.6
SMN2-214ENST00000626847 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.6
SMN2-214ENST00000626847 FHOD3Q2V2M9 1422 aa11.27□□□□□ -0.61
SMN2-214ENST00000626847 RICTORQ6R327 1708 aa11.27□□□□□ -0.61
SMN2-214ENST00000626847 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
SMN2-214ENST00000626847 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
SMN2-214ENST00000626847 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
SMN2-214ENST00000626847 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
SMN2-214ENST00000626847 ZFYVE16Q7Z3T8 1539 aa11.25□□□□□ -0.61
SMN2-214ENST00000626847 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
SMN2-214ENST00000626847 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
SMN2-214ENST00000626847 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
SMN2-214ENST00000626847 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
SMN2-214ENST00000626847 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
SMN2-214ENST00000626847 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
SMN2-214ENST00000626847 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
SMN2-214ENST00000626847 ZMYM4Q5VZL5 1548 aa11.24□□□□□ -0.61
SMN2-214ENST00000626847 ATP10BO94823 1461 aa11.23□□□□□ -0.61
SMN2-214ENST00000626847 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
SMN2-214ENST00000626847 CLCN1P35523 988 aa11.22□□□□□ -0.61
SMN2-214ENST00000626847 MS4A1P11836 297 aa11.2□□□□□ -0.62
SMN2-214ENST00000626847 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
SMN2-214ENST00000626847 MDM2Q00987 491 aaPredicted RBP11.2□□□□□ -0.62
SMN2-214ENST00000626847 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
SMN2-214ENST00000626847 PCMTD1Q96MG8 357 aaPredicted RBP11.19□□□□□ -0.62
SMN2-214ENST00000626847 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
SMN2-214ENST00000626847 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
SMN2-214ENST00000626847 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
SMN2-214ENST00000626847 REPIN1Q9BWE0 567 aaKnown RBP11.18□□□□□ -0.62
SMN2-214ENST00000626847 RGS17Q9UGC6 210 aaPredicted RBP11.18□□□□□ -0.62
SMN2-214ENST00000626847 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
SMN2-214ENST00000626847 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
SMN2-214ENST00000626847 FTSJ3Q8IY81 847 aaKnown RBP11.18□□□□□ -0.62
SMN2-214ENST00000626847 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
SMN2-214ENST00000626847 GOLGA3Q08378 1498 aa11.17□□□□□ -0.62
SMN2-214ENST00000626847 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
SMN2-214ENST00000626847 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
SMN2-214ENST00000626847 OATP04181 439 aa11.16□□□□□ -0.62
SMN2-214ENST00000626847 FLIIQ13045 1269 aa11.16□□□□□ -0.62
SMN2-214ENST00000626847 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
SMN2-214ENST00000626847 TICAM2Q86XR7 235 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms