RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-210	ENST00000625282	TSC1	Q92574	1164 aa		11.24	□□□□□ -0.61
SPTAN1-210	ENST00000625282	RWDD1	Q9H446	243 aa	Predicted RBP	11.24	□□□□□ -0.61
SPTAN1-210	ENST00000625282	PANK3	Q9H999	370 aa		11.24	□□□□□ -0.61
SPTAN1-210	ENST00000625282	MAGI3	Q5TCQ9	1506 aa		11.23	□□□□□ -0.61
SPTAN1-210	ENST00000625282	TAF7L	Q5H9L4	462 aa		11.23	□□□□□ -0.61
SPTAN1-210	ENST00000625282	UTP14C	Q5TAP6	766 aa	Known RBP	11.23	□□□□□ -0.61
SPTAN1-210	ENST00000625282	ERCC6L2	Q5T890	1561 aa		11.23	□□□□□ -0.61
SPTAN1-210	ENST00000625282	ROCK1	Q13464	1354 aa		11.23	□□□□□ -0.61
SPTAN1-210	ENST00000625282	BCL2L13	Q9BXK5	485 aa		11.23	□□□□□ -0.61
SPTAN1-210	ENST00000625282	RPRD2	Q5VT52	1461 aa	Known RBP	11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	C14orf37	Q86TY3	774 aa		11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	PPP1R9B	Q96SB3	815 aa		11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	WDR7	Q9Y4E6	1490 aa		11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	APAF1	O14727	1248 aa		11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	FAM177B	A6PVY3	158 aa		11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	RNF214	Q8ND24	703 aa		11.22	□□□□□ -0.61
SPTAN1-210	ENST00000625282	MCTP1	Q6DN14	999 aa		11.21	□□□□□ -0.61
SPTAN1-210	ENST00000625282	GTPBP4	Q9BZE4	634 aa	Known RBP	11.21	□□□□□ -0.61
SPTAN1-210	ENST00000625282	KNSTRN	Q9Y448	316 aa		11.21	□□□□□ -0.61
SPTAN1-210	ENST00000625282	LETM1	O95202	739 aa	Predicted RBP	11.21	□□□□□ -0.62
SPTAN1-210	ENST00000625282	KIF20A	O95235	890 aa		11.21	□□□□□ -0.62
SPTAN1-210	ENST00000625282	ZSCAN20	P17040	1043 aa	Predicted RBP	11.21	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PLCH2	O75038	1416 aa		11.21	□□□□□ -0.62
SPTAN1-210	ENST00000625282	NOL7	Q9UMY1	257 aa	Known RBP	11.2	□□□□□ -0.62
SPTAN1-210	ENST00000625282	KIAA2012	Q0VF49	1180 aa		11.2	□□□□□ -0.62
SPTAN1-210	ENST00000625282	TMF1	P82094	1093 aa		11.2	□□□□□ -0.62
SPTAN1-210	ENST00000625282	IPO4	Q8TEX9	1081 aa	Known RBP	11.2	□□□□□ -0.62
SPTAN1-210	ENST00000625282	SLFN5	Q08AF3	891 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	TPRN	Q4KMQ1	711 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	CCDC39	Q9UFE4	941 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	ZKSCAN5	Q9Y2L8	839 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	SSFA2	P28290	1259 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PLCB2	Q00722	1185 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	EIF3A	Q14152	1382 aa	Known RBP	11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282		E9PSI1	815 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	CDCA8	Q53HL2	280 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	JARID2	Q92833	1246 aa	Predicted RBP	11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	CHMP4A	Q9BY43	222 aa		11.19	□□□□□ -0.62
SPTAN1-210	ENST00000625282	FTSJ3	Q8IY81	847 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-210	ENST00000625282	TRAK1	Q9UPV9	953 aa		11.18	□□□□□ -0.62
SPTAN1-210	ENST00000625282	SYCP2	Q9BX26	1530 aa		11.18	□□□□□ -0.62
SPTAN1-210	ENST00000625282	KIAA1107	Q9UPP5	1409 aa		11.18	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PLEKHH1	Q9ULM0	1364 aa		11.18	□□□□□ -0.62
SPTAN1-210	ENST00000625282	ZBTB22	O15209	634 aa		11.17	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PDE3A	Q14432	1141 aa		11.17	□□□□□ -0.62
SPTAN1-210	ENST00000625282	ZNF500	O60304	480 aa	Predicted RBP	11.17	□□□□□ -0.62
SPTAN1-210	ENST00000625282	TRAPPC8	Q9Y2L5	1435 aa		11.17	□□□□□ -0.62
SPTAN1-210	ENST00000625282	HDGF	P51858	240 aa	Known RBP	11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	SRPK2	P78362	688 aa	Known RBP	11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	CHAF1A	Q13111	956 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PCDHB15	Q9Y5E8	787 aa		11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PDCL2	Q8N4E4	241 aa		11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-210	ENST00000625282	ABCA8	O94911	1581 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	TEX14	Q8IWB6	1497 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	PARD3	Q8TEW0	1356 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	KLHL40	Q2TBA0	621 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	HS1BP3	Q53T59	392 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	KCNJ4	P48050	445 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	RBSN	Q9H1K0	784 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	KIF3A	Q9Y496	699 aa		11.15	□□□□□ -0.62
SPTAN1-210	ENST00000625282	RAB3GAP1	Q15042	981 aa		11.15	□□□□□ -0.63
SPTAN1-210	ENST00000625282	HMGN5	P82970	282 aa	Known RBP	11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	TMEM51	Q9NW97	253 aa		11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	DENND4B	O75064	1496 aa	Predicted RBP	11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	TAF3	Q5VWG9	929 aa		11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	PRPF40A	O75400	957 aa	Known RBP	11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	PRIM1	P49642	420 aa	Known RBP	11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	ZSCAN23	Q3MJ62	389 aa		11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	ZNF830	Q96NB3	372 aa	Predicted RBP	11.14	□□□□□ -0.63
SPTAN1-210	ENST00000625282	TCOF1	Q13428	1488 aa	Known RBP	11.13	□□□□□ -0.63
SPTAN1-210	ENST00000625282	BAG4	O95429	457 aa	Known RBP	11.13	□□□□□ -0.63
SPTAN1-210	ENST00000625282	RBM27	Q9P2N5	1060 aa	Known RBP	11.13	□□□□□ -0.63
SPTAN1-210	ENST00000625282	AEBP1	Q8IUX7	1158 aa		11.13	□□□□□ -0.63
SPTAN1-210	ENST00000625282	VGF	O15240	615 aa	Predicted RBP	11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	ITSN2	Q9NZM3	1697 aa		11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	MCM5	P33992	734 aa		11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	SYCE3	A1L190	88 aa		11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	ATP2B3	Q16720	1220 aa		11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	MYRIP	Q8NFW9	859 aa		11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	RRP7A	Q9Y3A4	280 aa	Known RBP	11.12	□□□□□ -0.63
SPTAN1-210	ENST00000625282	PPP2R1A	P30153	589 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	NBPF1	Q3BBV0	1214 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	TNN	Q9UQP3	1299 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	BCORL1	Q5H9F3	1711 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	TMEM132E	Q6IEE7	984 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	SMC5	Q8IY18	1101 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	EID1	Q9Y6B2	187 aa		11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282		K7ELQ4	463 aa	Predicted RBP	11.11	□□□□□ -0.63
SPTAN1-210	ENST00000625282	PER1	O15534	1290 aa	Predicted RBP	11.1	□□□□□ -0.63
SPTAN1-210	ENST00000625282	U2AF2	P26368	475 aa	Known RBP eCLIP	11.1	□□□□□ -0.63	1e-7	■■■□□ 16.8
SPTAN1-210	ENST00000625282	CFAP70	Q5T0N1	1121 aa		11.1	□□□□□ -0.63
SPTAN1-210	ENST00000625282	NUTM2F	A1L443	756 aa		11.1	□□□□□ -0.63
SPTAN1-210	ENST00000625282	ZNF692	Q9BU19	519 aa	Predicted RBP	11.1	□□□□□ -0.63
SPTAN1-210	ENST00000625282	ZMYM4	Q5VZL5	1548 aa		11.1	□□□□□ -0.63
SPTAN1-210	ENST00000625282	TRERF1	Q96PN7	1200 aa		11.1	□□□□□ -0.63
SPTAN1-210	ENST00000625282	NKTR	P30414	1462 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms