RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 C14orf93Q9H972 538 aaKnown RBP12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 NOS1P29475 1434 aa12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 WASLO00401 505 aaPredicted RBP12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 ATP10AO60312 1499 aa12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 MSH6P52701 1360 aa12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 ZMYM3Q14202 1370 aa12.82□□□□□ -0.36
SRGAP2-217ENST00000624873 MCCP23508 829 aa12.81□□□□□ -0.36
SRGAP2-217ENST00000624873 KIAA1211Q6ZU35 1233 aa12.81□□□□□ -0.36
SRGAP2-217ENST00000624873 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
SRGAP2-217ENST00000624873 NEO1Q92859 1461 aa12.81□□□□□ -0.36
SRGAP2-217ENST00000624873 NCLP19338 710 aaKnown RBP12.8□□□□□ -0.36
SRGAP2-217ENST00000624873 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
SRGAP2-217ENST00000624873 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
SRGAP2-217ENST00000624873 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
SRGAP2-217ENST00000624873 HSPA2P54652 639 aa12.8□□□□□ -0.36
SRGAP2-217ENST00000624873 ZKSCAN2Q63HK3 967 aa12.79□□□□□ -0.36
SRGAP2-217ENST00000624873 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
SRGAP2-217ENST00000624873 NAP1L2Q9ULW6 460 aaPredicted RBP12.79□□□□□ -0.36
SRGAP2-217ENST00000624873 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
SRGAP2-217ENST00000624873 B4GALNT3Q6L9W6 998 aa12.79□□□□□ -0.36
SRGAP2-217ENST00000624873 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
SRGAP2-217ENST00000624873 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
SRGAP2-217ENST00000624873 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
SRGAP2-217ENST00000624873 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
SRGAP2-217ENST00000624873 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
SRGAP2-217ENST00000624873 HSP90AB1P08238 724 aaKnown RBP12.78□□□□□ -0.36
SRGAP2-217ENST00000624873 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
SRGAP2-217ENST00000624873 NGLY1Q96IV0 654 aa12.77□□□□□ -0.36
SRGAP2-217ENST00000624873 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.36
SRGAP2-217ENST00000624873 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.36
SRGAP2-217ENST00000624873 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.37
SRGAP2-217ENST00000624873 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
SRGAP2-217ENST00000624873 NECTIN2Q92692 538 aa12.77□□□□□ -0.37
SRGAP2-217ENST00000624873 KRT28Q7Z3Y7 464 aa12.77□□□□□ -0.37
SRGAP2-217ENST00000624873 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
SRGAP2-217ENST00000624873 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
SRGAP2-217ENST00000624873 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
SRGAP2-217ENST00000624873 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
SRGAP2-217ENST00000624873 BCL2L13Q9BXK5 485 aa12.76□□□□□ -0.37
SRGAP2-217ENST00000624873 CABP4P57796 275 aa12.75□□□□□ -0.37
SRGAP2-217ENST00000624873 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
SRGAP2-217ENST00000624873 SHANK2Q9UPX8 1470 aa12.75□□□□□ -0.37
SRGAP2-217ENST00000624873 PNISRQ8TF01 805 aaKnown RBP12.75□□□□□ -0.37
SRGAP2-217ENST00000624873 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
SRGAP2-217ENST00000624873 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
SRGAP2-217ENST00000624873 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
SRGAP2-217ENST00000624873 RIC3Q7Z5B4 369 aa12.74□□□□□ -0.37
SRGAP2-217ENST00000624873 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
SRGAP2-217ENST00000624873 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
SRGAP2-217ENST00000624873 ZBED9Q6R2W3 1325 aa12.73□□□□□ -0.37
SRGAP2-217ENST00000624873 C19orf44Q9H6X5 657 aa12.73□□□□□ -0.37
SRGAP2-217ENST00000624873 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
SRGAP2-217ENST00000624873 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
SRGAP2-217ENST00000624873 RPRD2Q5VT52 1461 aaKnown RBP12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 CHD1O14646 1710 aa12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 SAMD9Q5K651 1589 aa12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
SRGAP2-217ENST00000624873 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
SRGAP2-217ENST00000624873 ZRSR1Q15695 479 aaKnown RBP12.71□□□□□ -0.37
SRGAP2-217ENST00000624873 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.37
SRGAP2-217ENST00000624873 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.37
SRGAP2-217ENST00000624873 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
SRGAP2-217ENST00000624873 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
SRGAP2-217ENST00000624873 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
SRGAP2-217ENST00000624873 CCDC30Q5VVM6 783 aa12.71□□□□□ -0.38
SRGAP2-217ENST00000624873 PTPRKQ15262 1439 aa12.7□□□□□ -0.38
SRGAP2-217ENST00000624873 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
SRGAP2-217ENST00000624873 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
SRGAP2-217ENST00000624873 KIF6Q6ZMV9 814 aa12.69□□□□□ -0.38
SRGAP2-217ENST00000624873 FCHSD2O94868 740 aa12.69□□□□□ -0.38
SRGAP2-217ENST00000624873 NME9Q86XW9 330 aa12.69□□□□□ -0.38
SRGAP2-217ENST00000624873 NINLQ9Y2I6 1382 aa12.68□□□□□ -0.38
SRGAP2-217ENST00000624873 ZFYVE16Q7Z3T8 1539 aa12.68□□□□□ -0.38
SRGAP2-217ENST00000624873 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
SRGAP2-217ENST00000624873 CFAP43Q8NDM7 1665 aa12.68□□□□□ -0.38
SRGAP2-217ENST00000624873 VPS37DQ86XT2 251 aa12.68□□□□□ -0.38
SRGAP2-217ENST00000624873 ACEP12821 1306 aa12.67□□□□□ -0.38
SRGAP2-217ENST00000624873 CFAP74Q9C0B2 1584 aa12.67□□□□□ -0.38
SRGAP2-217ENST00000624873 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
SRGAP2-217ENST00000624873 NOL10Q9BSC4 688 aaKnown RBP12.67□□□□□ -0.38
SRGAP2-217ENST00000624873 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
SRGAP2-217ENST00000624873 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
SRGAP2-217ENST00000624873 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
SRGAP2-217ENST00000624873 MAPKBP1O60336 1514 aa12.66□□□□□ -0.38
SRGAP2-217ENST00000624873 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
SRGAP2-217ENST00000624873 ABCA8O94911 1581 aa12.66□□□□□ -0.38
SRGAP2-217ENST00000624873 EXOC5O00471 708 aa12.65□□□□□ -0.38
SRGAP2-217ENST00000624873 HDGFL1Q5TGJ6 251 aa12.65□□□□□ -0.38
SRGAP2-217ENST00000624873 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
SRGAP2-217ENST00000624873 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
SRGAP2-217ENST00000624873 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
SRGAP2-217ENST00000624873 KCNA6P17658 529 aa12.64□□□□□ -0.39
SRGAP2-217ENST00000624873 TTC21AQ8NDW8 1320 aa12.64□□□□□ -0.39
SRGAP2-217ENST00000624873 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
SRGAP2-217ENST00000624873 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms