RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 FAM160A2Q8N612 972 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-207ENST00000624700 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
CDKL5-207ENST00000624700 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
CDKL5-207ENST00000624700 FOXC1Q12948 553 aa9.02□□□□□ -0.97
CDKL5-207ENST00000624700 AMHR2Q16671 573 aa9.02□□□□□ -0.97
CDKL5-207ENST00000624700 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
CDKL5-207ENST00000624700 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
CDKL5-207ENST00000624700 PKD2L1Q9P0L9 805 aa9.02□□□□□ -0.97
CDKL5-207ENST00000624700 ZNF775Q96BV0 537 aaPredicted RBP9□□□□□ -0.97
CDKL5-207ENST00000624700 CLCN1P35523 988 aa8.98□□□□□ -0.97
CDKL5-207ENST00000624700 Q3C1V9 767 aa8.98□□□□□ -0.97
CDKL5-207ENST00000624700 MSS51Q4VC12 460 aa8.98□□□□□ -0.97
CDKL5-207ENST00000624700 PRDM9Q9NQV7 894 aa8.98□□□□□ -0.97
CDKL5-207ENST00000624700 RNF19BQ6ZMZ0 732 aa8.97□□□□□ -0.97
CDKL5-207ENST00000624700 POTECB2RU33 542 aa8.96□□□□□ -0.98
CDKL5-207ENST00000624700 CD46P15529 392 aa8.96□□□□□ -0.98
CDKL5-207ENST00000624700 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
CDKL5-207ENST00000624700 ST8SIA5O15466 376 aa8.95□□□□□ -0.98
CDKL5-207ENST00000624700 ZBTB24O43167 697 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-207ENST00000624700 TTLL12Q14166 644 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-207ENST00000624700 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
CDKL5-207ENST00000624700 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
CDKL5-207ENST00000624700 TOR4AQ9NXH8 423 aa8.95□□□□□ -0.98
CDKL5-207ENST00000624700 KDM4AO75164 1064 aa8.94□□□□□ -0.98
CDKL5-207ENST00000624700 CRIPAKQ8N1N5 446 aa8.93□□□□□ -0.98
CDKL5-207ENST00000624700 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
CDKL5-207ENST00000624700 GPCPD1Q9NPB8 672 aa8.93□□□□□ -0.98
CDKL5-207ENST00000624700 MMP16P51512 607 aa8.92□□□□□ -0.98
CDKL5-207ENST00000624700 MDM2Q00987 491 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-207ENST00000624700 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
CDKL5-207ENST00000624700 AVPP01185 164 aa8.91□□□□□ -0.98
CDKL5-207ENST00000624700 USP46P62068 366 aa8.91□□□□□ -0.98
CDKL5-207ENST00000624700 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
CDKL5-207ENST00000624700 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
CDKL5-207ENST00000624700 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-207ENST00000624700 WNT7AO00755 349 aa8.89□□□□□ -0.99
CDKL5-207ENST00000624700 TRIM32Q13049 653 aa8.89□□□□□ -0.99
CDKL5-207ENST00000624700 AXIN1O15169 862 aa8.88□□□□□ -0.99
CDKL5-207ENST00000624700 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
CDKL5-207ENST00000624700 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
CDKL5-207ENST00000624700 GIGYF2Q6Y7W6 1299 aaKnown RBP8.88□□□□□ -0.99
CDKL5-207ENST00000624700 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-207ENST00000624700 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-207ENST00000624700 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
CDKL5-207ENST00000624700 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
CDKL5-207ENST00000624700 HOXA2O43364 376 aa8.86□□□□□ -0.99
CDKL5-207ENST00000624700 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
CDKL5-207ENST00000624700 HLA-CQ95604 372 aa8.86□□□□□ -0.99
CDKL5-207ENST00000624700 DACH1Q9UI36 760 aa8.86□□□□□ -0.99
CDKL5-207ENST00000624700 RSPH6AQ9H0K4 717 aa8.85□□□□□ -0.99
CDKL5-207ENST00000624700 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
CDKL5-207ENST00000624700 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
CDKL5-207ENST00000624700 SMPD1P17405 629 aa8.83□□□□□ -1
CDKL5-207ENST00000624700 TREML4Q6UXN2 200 aa8.83□□□□□ -1
CDKL5-207ENST00000624700 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
CDKL5-207ENST00000624700 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
CDKL5-207ENST00000624700 FAM117AQ9C073 453 aa8.83□□□□□ -1
CDKL5-207ENST00000624700 ERICH6Q7L0X2 663 aa8.82□□□□□ -1
CDKL5-207ENST00000624700 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
CDKL5-207ENST00000624700 REPIN1Q9BWE0 567 aaKnown RBP8.82□□□□□ -1
CDKL5-207ENST00000624700 GMPR2Q9P2T1 348 aaKnown RBP8.82□□□□□ -1
CDKL5-207ENST00000624700 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
CDKL5-207ENST00000624700 MS4A1P11836 297 aa8.8□□□□□ -1
CDKL5-207ENST00000624700 JUNDP17535 347 aa8.8□□□□□ -1
CDKL5-207ENST00000624700 WNT7BP56706 349 aa8.8□□□□□ -1
CDKL5-207ENST00000624700 GUCA2AQ02747 115 aa8.8□□□□□ -1
CDKL5-207ENST00000624700 BEGAINQ9BUH8 593 aa8.8□□□□□ -1
CDKL5-207ENST00000624700 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
CDKL5-207ENST00000624700 J3QL48 77 aa8.79□□□□□ -1
CDKL5-207ENST00000624700 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
CDKL5-207ENST00000624700 SYMPKQ92797 1274 aaKnown RBP8.79□□□□□ -1
CDKL5-207ENST00000624700 SKOR1P84550 965 aa8.78□□□□□ -1
CDKL5-207ENST00000624700 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
CDKL5-207ENST00000624700 RETREG3Q86VR2 466 aa8.78□□□□□ -1
CDKL5-207ENST00000624700 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
CDKL5-207ENST00000624700 FDX1P10109 184 aa8.76□□□□□ -1.01
CDKL5-207ENST00000624700 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
CDKL5-207ENST00000624700 SKIV2LQ15477 1246 aaKnown RBP8.75□□□□□ -1.01
CDKL5-207ENST00000624700 HPS1Q92902 700 aa8.75□□□□□ -1.01
CDKL5-207ENST00000624700 PCMTD1Q96MG8 357 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-207ENST00000624700 NUDT12Q9BQG2 462 aa8.75□□□□□ -1.01
CDKL5-207ENST00000624700 C6orf229H3BNL8 230 aa8.74□□□□□ -1.01
CDKL5-207ENST00000624700 SH3D19Q5HYK7 790 aa8.74□□□□□ -1.01
CDKL5-207ENST00000624700 PCDHGC3Q9UN70 934 aa8.74□□□□□ -1.01
CDKL5-207ENST00000624700 WFS1O76024 890 aa8.73□□□□□ -1.01
CDKL5-207ENST00000624700 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
CDKL5-207ENST00000624700 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
CDKL5-207ENST00000624700 ALDH1A1P00352 501 aa8.72□□□□□ -1.01
CDKL5-207ENST00000624700 GJA5P36382 358 aa8.72□□□□□ -1.01
CDKL5-207ENST00000624700 SPIRE2Q8WWL2 714 aa8.72□□□□□ -1.01
CDKL5-207ENST00000624700 TRIM47Q96LD4 638 aa8.72□□□□□ -1.01
CDKL5-207ENST00000624700 SNRPBP14678 240 aaKnown RBP8.71□□□□□ -1.02
CDKL5-207ENST00000624700 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
CDKL5-207ENST00000624700 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
CDKL5-207ENST00000624700 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
CDKL5-207ENST00000624700 SIAH2O43255 324 aa8.69□□□□□ -1.02
CDKL5-207ENST00000624700 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
CDKL5-207ENST00000624700 TUSC1Q2TAM9 212 aa8.69□□□□□ -1.02
CDKL5-207ENST00000624700 KIFC2Q96AC6 838 aa8.69□□□□□ -1.02
CDKL5-207ENST00000624700 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms