RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 PTPRUQ92729 1446 aa15.71■□□□□ 0.11
ATRX-213ENST00000624032 ABCC11Q96J66 1382 aa15.7■□□□□ 0.1
ATRX-213ENST00000624032 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
ATRX-213ENST00000624032 AMOTL2Q9Y2J4 779 aa15.69■□□□□ 0.1
ATRX-213ENST00000624032 NPHP4O75161 1426 aaPredicted RBP15.68■□□□□ 0.1
ATRX-213ENST00000624032 LMTK3Q96Q04 1460 aa15.67■□□□□ 0.1
ATRX-213ENST00000624032 ROBO2Q9HCK4 1378 aa15.67■□□□□ 0.1
ATRX-213ENST00000624032 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
ATRX-213ENST00000624032 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
ATRX-213ENST00000624032 DLC1Q96QB1 1528 aa15.66■□□□□ 0.1
ATRX-213ENST00000624032 DIP2AQ14689 1571 aa15.65■□□□□ 0.1
ATRX-213ENST00000624032 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
ATRX-213ENST00000624032 TULP4Q9NRJ4 1543 aa15.64■□□□□ 0.1
ATRX-213ENST00000624032 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.09
ATRX-213ENST00000624032 TECPR2O15040 1411 aa15.64■□□□□ 0.09
ATRX-213ENST00000624032 KCNA6P17658 529 aa15.64■□□□□ 0.09
ATRX-213ENST00000624032 KNDC1Q76NI1 1749 aa15.64■□□□□ 0.09
ATRX-213ENST00000624032 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
ATRX-213ENST00000624032 EVC2Q86UK5 1308 aa15.63■□□□□ 0.09
ATRX-213ENST00000624032 CPS1P31327 1500 aa15.63■□□□□ 0.09
ATRX-213ENST00000624032 PANK3Q9H999 370 aa15.62■□□□□ 0.09
ATRX-213ENST00000624032 RBM33Q96EV2 1170 aaKnown RBP15.62■□□□□ 0.09
ATRX-213ENST00000624032 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
ATRX-213ENST00000624032 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
ATRX-213ENST00000624032 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
ATRX-213ENST00000624032 FAM135BQ49AJ0 1406 aa15.61■□□□□ 0.09
ATRX-213ENST00000624032 SIRT1Q96EB6 747 aa15.61■□□□□ 0.09
ATRX-213ENST00000624032 CDK19Q9BWU1 502 aa15.61■□□□□ 0.09
ATRX-213ENST00000624032 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
ATRX-213ENST00000624032 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
ATRX-213ENST00000624032 MYOM1P52179 1685 aa15.6■□□□□ 0.09
ATRX-213ENST00000624032 XRN1Q8IZH2 1706 aaKnown RBP15.6■□□□□ 0.09
ATRX-213ENST00000624032 SLC12A5Q9H2X9 1139 aa15.59■□□□□ 0.09
ATRX-213ENST00000624032 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
ATRX-213ENST00000624032 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.59■□□□□ 0.09
ATRX-213ENST00000624032 PIK3R4Q99570 1358 aa15.59■□□□□ 0.09
ATRX-213ENST00000624032 STRCQ7RTU9 1775 aa15.58■□□□□ 0.08
ATRX-213ENST00000624032 WASLO00401 505 aaPredicted RBP15.57■□□□□ 0.08
ATRX-213ENST00000624032 PTCH1Q13635 1447 aa15.56■□□□□ 0.08
ATRX-213ENST00000624032 NUTM2FA1L443 756 aa15.56■□□□□ 0.08
ATRX-213ENST00000624032 PPP4R2Q9NY27 417 aa15.56■□□□□ 0.08
ATRX-213ENST00000624032 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
ATRX-213ENST00000624032 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
ATRX-213ENST00000624032 PUS7Q96PZ0 661 aaKnown RBP15.52■□□□□ 0.08
ATRX-213ENST00000624032 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.08
ATRX-213ENST00000624032 CABP1Q9NZU7 370 aa15.52■□□□□ 0.08
ATRX-213ENST00000624032 CC2D1BQ5T0F9 858 aaKnown RBP15.52■□□□□ 0.07
ATRX-213ENST00000624032 NUDT16Q96DE0 195 aaKnown RBP15.51■□□□□ 0.07
ATRX-213ENST00000624032 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
ATRX-213ENST00000624032 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
ATRX-213ENST00000624032 STRCP1A6NGW2 1772 aa15.51■□□□□ 0.07
ATRX-213ENST00000624032 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
ATRX-213ENST00000624032 KNSTRNQ9Y448 316 aa15.5■□□□□ 0.07
ATRX-213ENST00000624032 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
ATRX-213ENST00000624032 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
ATRX-213ENST00000624032 C14orf37Q86TY3 774 aa15.49■□□□□ 0.07
ATRX-213ENST00000624032 NALCNQ8IZF0 1738 aa15.47■□□□□ 0.07
ATRX-213ENST00000624032 CCDC184Q52MB2 194 aa15.47■□□□□ 0.07
ATRX-213ENST00000624032 AMER1Q5JTC6 1135 aaPredicted RBP15.47■□□□□ 0.07
ATRX-213ENST00000624032 PPIP5K1Q6PFW1 1433 aa15.47■□□□□ 0.07
ATRX-213ENST00000624032 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
ATRX-213ENST00000624032 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.07
ATRX-213ENST00000624032 A0A1W2PP64 1363 aa15.46■□□□□ 0.07
ATRX-213ENST00000624032 ATP7BP35670 1465 aa15.46■□□□□ 0.07
ATRX-213ENST00000624032 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
ATRX-213ENST00000624032 CD163L1Q9NR16 1453 aa15.46■□□□□ 0.07
ATRX-213ENST00000624032 ANKRD36BQ8N2N9 1353 aa15.46■□□□□ 0.06
ATRX-213ENST00000624032 DEKP35659 375 aaKnown RBP15.45■□□□□ 0.06
ATRX-213ENST00000624032 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
ATRX-213ENST00000624032 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
ATRX-213ENST00000624032 USP32Q8NFA0 1604 aa15.44■□□□□ 0.06
ATRX-213ENST00000624032 TERF2IPQ9NYB0 399 aa15.44■□□□□ 0.06
ATRX-213ENST00000624032 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
ATRX-213ENST00000624032 NINLQ9Y2I6 1382 aa15.43■□□□□ 0.06
ATRX-213ENST00000624032 TMEM94Q12767 1356 aa15.43■□□□□ 0.06
ATRX-213ENST00000624032 PMFBP1Q8TBY8 1022 aa15.43■□□□□ 0.06
ATRX-213ENST00000624032 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
ATRX-213ENST00000624032 HDGFL2Q7Z4V5 671 aaPredicted RBP15.42■□□□□ 0.06
ATRX-213ENST00000624032 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
ATRX-213ENST00000624032 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
ATRX-213ENST00000624032 FMN2Q9NZ56 1722 aa15.41■□□□□ 0.06
ATRX-213ENST00000624032 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
ATRX-213ENST00000624032 RALBP1Q15311 655 aa15.4■□□□□ 0.06
ATRX-213ENST00000624032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATRX-213ENST00000624032 TOPAZ1Q8N9V7 1692 aa15.4■□□□□ 0.06
ATRX-213ENST00000624032 ACEP12821 1306 aa15.4■□□□□ 0.06
ATRX-213ENST00000624032 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
ATRX-213ENST00000624032 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
ATRX-213ENST00000624032 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
ATRX-213ENST00000624032 CPSF1Q10570 1443 aaKnown RBP15.38■□□□□ 0.05
ATRX-213ENST00000624032 PLEKHG3A1L390 1219 aa15.38■□□□□ 0.05
ATRX-213ENST00000624032 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
ATRX-213ENST00000624032 TNNT2P45379 298 aaPredicted RBP15.38■□□□□ 0.05
ATRX-213ENST00000624032 GGNBP2Q9H3C7 697 aa15.38■□□□□ 0.05
ATRX-213ENST00000624032 C19orf44Q9H6X5 657 aa15.38■□□□□ 0.05
ATRX-213ENST00000624032 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
ATRX-213ENST00000624032 CGNL1Q0VF96 1302 aa15.38■□□□□ 0.05
ATRX-213ENST00000624032 MYBBP1AQ9BQG0 1328 aaKnown RBP15.37■□□□□ 0.05
ATRX-213ENST00000624032 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
ATRX-213ENST00000624032 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms