RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TOM1O60784 492 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 NAP1L1P55209 391 aaKnown RBP7.59□□□□□ -1.19
CDKL5-205ENST00000623535 ROCK2O75116 1388 aaKnown RBP7.59□□□□□ -1.19
CDKL5-205ENST00000623535 B4DLN1 442 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 MRPL12P52815 198 aaKnown RBP7.59□□□□□ -1.19
CDKL5-205ENST00000623535 CALRP27797 417 aaKnown RBP7.59□□□□□ -1.2
CDKL5-205ENST00000623535 BIRC2Q13490 618 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 LRRC45Q96CN5 670 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 GOLGA6L19H0YKK7 550 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 IFIT2P09913 472 aaKnown RBP7.58□□□□□ -1.2
CDKL5-205ENST00000623535 CCDC150Q8NCX0 1101 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 GOLGA3Q08378 1498 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 RGS3P49796 1198 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 CCDC117Q8IWD4 279 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-205ENST00000623535 SLF2Q8IX21 1173 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 DCTN1Q14203 1278 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 AIDAQ96BJ3 306 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 RBM42Q9BTD8 480 aaKnown RBP7.58□□□□□ -1.2
CDKL5-205ENST00000623535 EHMT1Q9H9B1 1298 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 RGS22Q8NE09 1264 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 NGLY1Q96IV0 654 aa7.58□□□□□ -1.2
CDKL5-205ENST00000623535 MIA2Q96PC5 1412 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 ANKLE2Q86XL3 938 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 BCL11BQ9C0K0 894 aaPredicted RBP7.57□□□□□ -1.2
CDKL5-205ENST00000623535 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 TOM1L2Q6ZVM7 507 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 RIC3Q7Z5B4 369 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 CEP164Q9UPV0 1460 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 RAB3GAP2Q9H2M9 1393 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 HMGN5P82970 282 aaKnown RBP7.57□□□□□ -1.2
CDKL5-205ENST00000623535 RUFY1Q96T51 708 aa7.57□□□□□ -1.2
CDKL5-205ENST00000623535 MCTP1Q6DN14 999 aa7.56□□□□□ -1.2
CDKL5-205ENST00000623535 ATF7IPQ6VMQ6 1270 aa7.56□□□□□ -1.2
CDKL5-205ENST00000623535 LUC7LQ9NQ29 371 aaKnown RBP7.56□□□□□ -1.2
CDKL5-205ENST00000623535 CHMP4BP1P59074 171 aa7.56□□□□□ -1.2
CDKL5-205ENST00000623535 TXLNBQ8N3L3 684 aa7.56□□□□□ -1.2
CDKL5-205ENST00000623535 TATP17735 454 aaPredicted RBP7.56□□□□□ -1.2
CDKL5-205ENST00000623535 BECN2A8MW95 431 aa7.56□□□□□ -1.2
CDKL5-205ENST00000623535 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDKL5-205ENST00000623535 CGNL1Q0VF96 1302 aa7.56□□□□□ -1.2
CDKL5-205ENST00000623535 PMFBP1Q8TBY8 1022 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 FAM161AQ3B820 660 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 SLU7O95391 586 aaKnown RBP7.55□□□□□ -1.2
CDKL5-205ENST00000623535 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
CDKL5-205ENST00000623535 FERMT1Q9BQL6 677 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 ZNF76P36508 570 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 ERC2O15083 957 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 SOGA3Q5TF21 947 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 CCDC18Q5T9S5 1454 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 COMMD10Q9Y6G5 202 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 PIP4K2AP48426 406 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-205ENST00000623535 WASHC4Q2M389 1173 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 MPHOSPH8Q99549 860 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 NACAP1Q9BZK3 213 aa7.55□□□□□ -1.2
CDKL5-205ENST00000623535 EPB41L2O43491 1005 aaKnown RBP7.54□□□□□ -1.2
CDKL5-205ENST00000623535 EIF2S2P20042 333 aaKnown RBP7.54□□□□□ -1.2
CDKL5-205ENST00000623535 PRC1O43663 620 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 TAF12Q16514 161 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 DNAJC2Q99543 621 aaKnown RBP7.54□□□□□ -1.2
CDKL5-205ENST00000623535 PRDM11Q9NQV5 511 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 ERLIN2O94905 339 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 MRPS9P82933 396 aaKnown RBP7.54□□□□□ -1.2
CDKL5-205ENST00000623535 PIBF1Q8WXW3 757 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
CDKL5-205ENST00000623535 SPG7Q9UQ90 795 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 ANAPC15P60006 121 aa7.54□□□□□ -1.2
CDKL5-205ENST00000623535 PLEKHO1Q53GL0 409 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 HMGB1P1B2RPK0 211 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 PRKCSHP14314 528 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 BMP2KQ9NSY1 1161 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 CNNM1Q9NRU3 951 aa7.53□□□□□ -1.2
CDKL5-205ENST00000623535 GBP2P32456 591 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 CETN2P41208 172 aa7.53□□□□□ -1.2
CDKL5-205ENST00000623535 NCBP1Q09161 790 aaKnown RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 PPP1R12BO60237 982 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-205ENST00000623535 NEFHP12036 1026 aa7.53□□□□□ -1.2
CDKL5-205ENST00000623535 PATL2C9JE40 543 aaKnown RBP7.52□□□□□ -1.2
CDKL5-205ENST00000623535 BRDTQ58F21 947 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-205ENST00000623535 LRPPRCP42704 1394 aaKnown RBP7.52□□□□□ -1.21
CDKL5-205ENST00000623535 KIF22Q14807 665 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 GIGYF2Q6Y7W6 1299 aaKnown RBP7.52□□□□□ -1.21
CDKL5-205ENST00000623535 FMN1Q68DA7 1419 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 VIMP08670 466 aaKnown RBP7.52□□□□□ -1.21
CDKL5-205ENST00000623535 PDILTQ8N807 584 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 DEF6Q9H4E7 631 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-205ENST00000623535 HDAC9Q9UKV0 1011 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 CAGE1Q8TC20 777 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 CUL5Q93034 780 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 PLIN1O60240 522 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
CDKL5-205ENST00000623535 PRPF31Q8WWY3 499 aaKnown RBP7.51□□□□□ -1.21
CDKL5-205ENST00000623535 NAP1L5Q96NT1 182 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-205ENST00000623535 ZSCAN25Q6NSZ9 544 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 STAMBPO95630 424 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 PRKAG2Q9UGJ0 569 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 IGHMBP2P38935 993 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms