RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
LINC01561-202ENST00000623529 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
LINC01561-202ENST00000623529 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.17
LINC01561-202ENST00000623529 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.17
LINC01561-202ENST00000623529 ABCC11Q96J66 1382 aa13.96□□□□□ -0.17
LINC01561-202ENST00000623529 TMF1P82094 1093 aa13.96□□□□□ -0.18
LINC01561-202ENST00000623529 PTPRUQ92729 1446 aa13.96□□□□□ -0.18
LINC01561-202ENST00000623529 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
LINC01561-202ENST00000623529 MIER1Q8N108 512 aa13.94□□□□□ -0.18
LINC01561-202ENST00000623529 POGKQ9P215 609 aa13.94□□□□□ -0.18
LINC01561-202ENST00000623529 AMOTL2Q9Y2J4 779 aa13.94□□□□□ -0.18
LINC01561-202ENST00000623529 PIP4K2BP78356 416 aa13.93□□□□□ -0.18
LINC01561-202ENST00000623529 ARHGEF28Q8N1W1 1705 aaKnown RBP13.93□□□□□ -0.18
LINC01561-202ENST00000623529 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
LINC01561-202ENST00000623529 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
LINC01561-202ENST00000623529 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
LINC01561-202ENST00000623529 SIRT1Q96EB6 747 aa13.91□□□□□ -0.18
LINC01561-202ENST00000623529 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
LINC01561-202ENST00000623529 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
LINC01561-202ENST00000623529 KCNA6P17658 529 aa13.9□□□□□ -0.18
LINC01561-202ENST00000623529 TOM1O60784 492 aa13.9□□□□□ -0.18
LINC01561-202ENST00000623529 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.19
LINC01561-202ENST00000623529 TECPR2O15040 1411 aa13.89□□□□□ -0.19
LINC01561-202ENST00000623529 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
LINC01561-202ENST00000623529 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
LINC01561-202ENST00000623529 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
LINC01561-202ENST00000623529 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
LINC01561-202ENST00000623529 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
LINC01561-202ENST00000623529 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
LINC01561-202ENST00000623529 PANK3Q9H999 370 aa13.87□□□□□ -0.19
LINC01561-202ENST00000623529 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
LINC01561-202ENST00000623529 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
LINC01561-202ENST00000623529 CDCA8Q53HL2 280 aa13.86□□□□□ -0.19
LINC01561-202ENST00000623529 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
LINC01561-202ENST00000623529 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
LINC01561-202ENST00000623529 TULP4Q9NRJ4 1543 aa13.86□□□□□ -0.19
LINC01561-202ENST00000623529 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
LINC01561-202ENST00000623529 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
LINC01561-202ENST00000623529 PIK3R4Q99570 1358 aa13.85□□□□□ -0.19
LINC01561-202ENST00000623529 CPS1P31327 1500 aa13.84□□□□□ -0.19
LINC01561-202ENST00000623529 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.19
LINC01561-202ENST00000623529 WASLO00401 505 aaPredicted RBP13.83□□□□□ -0.2
LINC01561-202ENST00000623529 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
LINC01561-202ENST00000623529 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
LINC01561-202ENST00000623529 KNDC1Q76NI1 1749 aa13.83□□□□□ -0.2
LINC01561-202ENST00000623529 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
LINC01561-202ENST00000623529 PUS7Q96PZ0 661 aaKnown RBP13.82□□□□□ -0.2
LINC01561-202ENST00000623529 CARD14Q9BXL6 1004 aa13.82□□□□□ -0.2
LINC01561-202ENST00000623529 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-202ENST00000623529 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-202ENST00000623529 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
LINC01561-202ENST00000623529 PTCH1Q13635 1447 aa13.8□□□□□ -0.2
LINC01561-202ENST00000623529 NUTM2FA1L443 756 aa13.8□□□□□ -0.2
LINC01561-202ENST00000623529 ANP32CO43423 234 aa13.79□□□□□ -0.2
LINC01561-202ENST00000623529 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
LINC01561-202ENST00000623529 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
LINC01561-202ENST00000623529 MYOM1P52179 1685 aa13.78□□□□□ -0.2
LINC01561-202ENST00000623529 PRKRIP1Q9H875 184 aaPredicted RBP13.78□□□□□ -0.2
LINC01561-202ENST00000623529 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
LINC01561-202ENST00000623529 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
LINC01561-202ENST00000623529 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
LINC01561-202ENST00000623529 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
LINC01561-202ENST00000623529 STRCP1A6NGW2 1772 aa13.75□□□□□ -0.21
LINC01561-202ENST00000623529 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
LINC01561-202ENST00000623529 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
LINC01561-202ENST00000623529 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
LINC01561-202ENST00000623529 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
LINC01561-202ENST00000623529 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
LINC01561-202ENST00000623529 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
LINC01561-202ENST00000623529 NWD1Q149M9 1564 aa13.72□□□□□ -0.21
LINC01561-202ENST00000623529 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
LINC01561-202ENST00000623529 ADGRB2O60241 1585 aa13.71□□□□□ -0.21
LINC01561-202ENST00000623529 A0A1W2PP64 1363 aa13.71□□□□□ -0.21
LINC01561-202ENST00000623529 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
LINC01561-202ENST00000623529 ATP7BP35670 1465 aa13.71□□□□□ -0.22
LINC01561-202ENST00000623529 C14orf37Q86TY3 774 aa13.71□□□□□ -0.22
LINC01561-202ENST00000623529 PPIP5K1Q6PFW1 1433 aa13.71□□□□□ -0.22
LINC01561-202ENST00000623529 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
LINC01561-202ENST00000623529 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
LINC01561-202ENST00000623529 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
LINC01561-202ENST00000623529 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
LINC01561-202ENST00000623529 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
LINC01561-202ENST00000623529 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
LINC01561-202ENST00000623529 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
LINC01561-202ENST00000623529 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
LINC01561-202ENST00000623529 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
LINC01561-202ENST00000623529 NALCNQ8IZF0 1738 aa13.68□□□□□ -0.22
LINC01561-202ENST00000623529 CPSF1Q10570 1443 aaKnown RBP13.68□□□□□ -0.22
LINC01561-202ENST00000623529 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
LINC01561-202ENST00000623529 SUPT16HQ9Y5B9 1047 aaKnown RBP13.68□□□□□ -0.22
LINC01561-202ENST00000623529 ACEP12821 1306 aa13.67□□□□□ -0.22
LINC01561-202ENST00000623529 RGPD8O14715 1765 aaPredicted RBP13.67□□□□□ -0.22
LINC01561-202ENST00000623529 NKTRP30414 1462 aaKnown RBP13.67□□□□□ -0.22
LINC01561-202ENST00000623529 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
LINC01561-202ENST00000623529 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
LINC01561-202ENST00000623529 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
LINC01561-202ENST00000623529 FYB1O15117 783 aa13.66□□□□□ -0.22
LINC01561-202ENST00000623529 RALBP1Q15311 655 aa13.66□□□□□ -0.22
LINC01561-202ENST00000623529 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
LINC01561-202ENST00000623529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms