RNA–Protein interactions for RNA: ENST00000623256.3

LINC01727-202, Transcript of long intergenic non-protein coding RNA 1727, humanhuman

TSL 4 BASIC

Gene LINC01727, Length 1,218 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01727-202ENST00000623256 PTCH1Q13635 1447 aa13.9□□□□□ -0.19
LINC01727-202ENST00000623256 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.19
LINC01727-202ENST00000623256 LAMC1P11047 1609 aa13.89□□□□□ -0.19
LINC01727-202ENST00000623256 PRAG1Q86YV5 1406 aa13.89□□□□□ -0.19
LINC01727-202ENST00000623256 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
LINC01727-202ENST00000623256 ORAI2Q96SN7 254 aa13.86□□□□□ -0.19
LINC01727-202ENST00000623256 SOS2Q07890 1332 aaPredicted RBP13.86□□□□□ -0.19
LINC01727-202ENST00000623256 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
LINC01727-202ENST00000623256 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
LINC01727-202ENST00000623256 ADAMTS2O95450 1211 aa13.84□□□□□ -0.19
LINC01727-202ENST00000623256 RBM6P78332 1123 aaKnown RBP13.84□□□□□ -0.19
LINC01727-202ENST00000623256 KIF1BO60333 1816 aa13.84□□□□□ -0.19
LINC01727-202ENST00000623256 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
LINC01727-202ENST00000623256 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
LINC01727-202ENST00000623256 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
LINC01727-202ENST00000623256 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
LINC01727-202ENST00000623256 PPLO60437 1756 aa13.8□□□□□ -0.2
LINC01727-202ENST00000623256 MYOM2P54296 1465 aa13.8□□□□□ -0.2
LINC01727-202ENST00000623256 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
LINC01727-202ENST00000623256 FNBP4Q8N3X1 1017 aaPredicted RBP13.79□□□□□ -0.2
LINC01727-202ENST00000623256 PXDNQ92626 1479 aa13.79□□□□□ -0.2
LINC01727-202ENST00000623256 CDC42BPGQ6DT37 1551 aa13.79□□□□□ -0.2
LINC01727-202ENST00000623256 USP21Q9UK80 565 aa13.78□□□□□ -0.2
LINC01727-202ENST00000623256 ATRNO75882 1429 aa13.78□□□□□ -0.2
LINC01727-202ENST00000623256 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.21
LINC01727-202ENST00000623256 EP400Q96L91 3159 aa13.76□□□□□ -0.21
LINC01727-202ENST00000623256 BCL9LQ86UU0 1499 aa13.75□□□□□ -0.21
LINC01727-202ENST00000623256 TECPR2O15040 1411 aa13.75□□□□□ -0.21
LINC01727-202ENST00000623256 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
LINC01727-202ENST00000623256 ESCO1Q5FWF5 840 aa13.75□□□□□ -0.21
LINC01727-202ENST00000623256 TRPC5Q9UL62 973 aaPredicted RBP13.75□□□□□ -0.21
LINC01727-202ENST00000623256 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
LINC01727-202ENST00000623256 PLEKHH1Q9ULM0 1364 aa13.74□□□□□ -0.21
LINC01727-202ENST00000623256 NPHP3Q7Z494 1330 aa13.74□□□□□ -0.21
LINC01727-202ENST00000623256 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
LINC01727-202ENST00000623256 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
LINC01727-202ENST00000623256 FOXO3O43524 673 aa13.73□□□□□ -0.21
LINC01727-202ENST00000623256 WAPLQ7Z5K2 1190 aa13.73□□□□□ -0.21
LINC01727-202ENST00000623256 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
LINC01727-202ENST00000623256 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
LINC01727-202ENST00000623256 ZBTB22O15209 634 aa13.71□□□□□ -0.21
LINC01727-202ENST00000623256 STK26Q9P289 416 aa13.71□□□□□ -0.21
LINC01727-202ENST00000623256 CCDC144AA2RUR9 1427 aa13.71□□□□□ -0.22
LINC01727-202ENST00000623256 PIK3C2GO75747 1445 aa13.71□□□□□ -0.22
LINC01727-202ENST00000623256 IFT172Q9UG01 1749 aa13.7□□□□□ -0.22
LINC01727-202ENST00000623256 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
LINC01727-202ENST00000623256 RGL3Q3MIN7 710 aa13.7□□□□□ -0.22
LINC01727-202ENST00000623256 TMEM132EQ6IEE7 984 aa13.7□□□□□ -0.22
LINC01727-202ENST00000623256 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
LINC01727-202ENST00000623256 KNDC1Q76NI1 1749 aa13.69□□□□□ -0.22
LINC01727-202ENST00000623256 MARF1Q9Y4F3 1742 aaKnown RBP13.68□□□□□ -0.22
LINC01727-202ENST00000623256 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
LINC01727-202ENST00000623256 SLIT2O94813 1529 aa13.68□□□□□ -0.22
LINC01727-202ENST00000623256 FMN2Q9NZ56 1722 aa13.67□□□□□ -0.22
LINC01727-202ENST00000623256 SPATA31A3Q5VYP0 1347 aa13.67□□□□□ -0.22
LINC01727-202ENST00000623256 YTHDC2Q9H6S0 1430 aaKnown RBP13.67□□□□□ -0.22
LINC01727-202ENST00000623256 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
LINC01727-202ENST00000623256 GLI3P10071 1580 aa13.66□□□□□ -0.22
LINC01727-202ENST00000623256 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
LINC01727-202ENST00000623256 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
LINC01727-202ENST00000623256 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
LINC01727-202ENST00000623256 NRXN1Q9ULB1 1477 aa13.65□□□□□ -0.22
LINC01727-202ENST00000623256 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
LINC01727-202ENST00000623256 UNC5CLQ8IV45 518 aa13.64□□□□□ -0.23
LINC01727-202ENST00000623256 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
LINC01727-202ENST00000623256 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
LINC01727-202ENST00000623256 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
LINC01727-202ENST00000623256 C14orf93Q9H972 538 aaKnown RBP13.63□□□□□ -0.23
LINC01727-202ENST00000623256 CCDC125Q86Z20 511 aa13.62□□□□□ -0.23
LINC01727-202ENST00000623256 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
LINC01727-202ENST00000623256 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
LINC01727-202ENST00000623256 CFAP70Q5T0N1 1121 aa13.61□□□□□ -0.23
LINC01727-202ENST00000623256 CABLES1Q8TDN4 633 aa13.61□□□□□ -0.23
LINC01727-202ENST00000623256 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
LINC01727-202ENST00000623256 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
LINC01727-202ENST00000623256 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
LINC01727-202ENST00000623256 SBNO1A3KN83 1393 aa13.58□□□□□ -0.23
LINC01727-202ENST00000623256 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
LINC01727-202ENST00000623256 VPS72Q15906 364 aa13.58□□□□□ -0.24
LINC01727-202ENST00000623256 PRAM1Q96QH2 718 aa13.58□□□□□ -0.24
LINC01727-202ENST00000623256 ABCA3Q99758 1704 aa13.58□□□□□ -0.24
LINC01727-202ENST00000623256 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
LINC01727-202ENST00000623256 CAPN15O75808 1086 aa13.57□□□□□ -0.24
LINC01727-202ENST00000623256 SAFB2Q14151 953 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC01727-202ENST00000623256 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
LINC01727-202ENST00000623256 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
LINC01727-202ENST00000623256 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
LINC01727-202ENST00000623256 PLCH1Q4KWH8 1693 aa13.56□□□□□ -0.24
LINC01727-202ENST00000623256 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
LINC01727-202ENST00000623256 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
LINC01727-202ENST00000623256 PSME1Q06323 249 aa13.56□□□□□ -0.24
LINC01727-202ENST00000623256 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
LINC01727-202ENST00000623256 ADGRB1O14514 1584 aa13.56□□□□□ -0.24
LINC01727-202ENST00000623256 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
LINC01727-202ENST00000623256 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
LINC01727-202ENST00000623256 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
LINC01727-202ENST00000623256 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
LINC01727-202ENST00000623256 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
LINC01727-202ENST00000623256 ARHGEF10O15013 1369 aa13.55□□□□□ -0.24
LINC01727-202ENST00000623256 PMFBP1Q8TBY8 1022 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms