RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.4
LINC00963-216ENST00000623185 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
LINC00963-216ENST00000623185 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
LINC00963-216ENST00000623185 TESK2Q96S53 571 aa17.51■□□□□ 0.39
LINC00963-216ENST00000623185 MSH6P52701 1360 aa17.51■□□□□ 0.39
LINC00963-216ENST00000623185 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
LINC00963-216ENST00000623185 WASLO00401 505 aaPredicted RBP17.5■□□□□ 0.39
LINC00963-216ENST00000623185 ATF3P18847 181 aa17.5■□□□□ 0.39
LINC00963-216ENST00000623185 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
LINC00963-216ENST00000623185 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
LINC00963-216ENST00000623185 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
LINC00963-216ENST00000623185 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
LINC00963-216ENST00000623185 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
LINC00963-216ENST00000623185 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
LINC00963-216ENST00000623185 TOM1O60784 492 aa17.47■□□□□ 0.39
LINC00963-216ENST00000623185 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
LINC00963-216ENST00000623185 DCCP43146 1447 aa17.47■□□□□ 0.39
LINC00963-216ENST00000623185 SLAIN2Q9P270 581 aa17.46■□□□□ 0.39
LINC00963-216ENST00000623185 TMF1P82094 1093 aa17.45■□□□□ 0.38
LINC00963-216ENST00000623185 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
LINC00963-216ENST00000623185 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
LINC00963-216ENST00000623185 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
LINC00963-216ENST00000623185 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
LINC00963-216ENST00000623185 NUDT16Q96DE0 195 aaKnown RBP17.41■□□□□ 0.38
LINC00963-216ENST00000623185 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
LINC00963-216ENST00000623185 UBAP1LF5GYI3 381 aa17.4■□□□□ 0.38
LINC00963-216ENST00000623185 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
LINC00963-216ENST00000623185 XIRP1Q702N8 1843 aaKnown RBP17.39■□□□□ 0.37
LINC00963-216ENST00000623185 ADGRB2O60241 1585 aa17.37■□□□□ 0.37
LINC00963-216ENST00000623185 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
LINC00963-216ENST00000623185 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
LINC00963-216ENST00000623185 MST1RQ04912 1400 aa17.37■□□□□ 0.37
LINC00963-216ENST00000623185 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
LINC00963-216ENST00000623185 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
LINC00963-216ENST00000623185 PLEKHG3A1L390 1219 aa17.36■□□□□ 0.37
LINC00963-216ENST00000623185 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
LINC00963-216ENST00000623185 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
LINC00963-216ENST00000623185 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
LINC00963-216ENST00000623185 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
LINC00963-216ENST00000623185 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
LINC00963-216ENST00000623185 QRICH2Q9H0J4 1663 aa17.35■□□□□ 0.37
LINC00963-216ENST00000623185 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
LINC00963-216ENST00000623185 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
LINC00963-216ENST00000623185 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
LINC00963-216ENST00000623185 BRINP3Q76B58 766 aa17.33■□□□□ 0.36
LINC00963-216ENST00000623185 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.36
LINC00963-216ENST00000623185 TULP4Q9NRJ4 1543 aa17.32■□□□□ 0.36
LINC00963-216ENST00000623185 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-216ENST00000623185 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
LINC00963-216ENST00000623185 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
LINC00963-216ENST00000623185 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
LINC00963-216ENST00000623185 FOXO3O43524 673 aa17.29■□□□□ 0.36
LINC00963-216ENST00000623185 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
LINC00963-216ENST00000623185 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
LINC00963-216ENST00000623185 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
LINC00963-216ENST00000623185 KIF7Q2M1P5 1343 aa17.28■□□□□ 0.36
LINC00963-216ENST00000623185 FMN2Q9NZ56 1722 aa17.28■□□□□ 0.36
LINC00963-216ENST00000623185 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
LINC00963-216ENST00000623185 ATP7BP35670 1465 aa17.28■□□□□ 0.36
LINC00963-216ENST00000623185 ACEP12821 1306 aa17.27■□□□□ 0.36
LINC00963-216ENST00000623185 PSME1Q06323 249 aa17.27■□□□□ 0.36
LINC00963-216ENST00000623185 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
LINC00963-216ENST00000623185 PPIP5K1Q6PFW1 1433 aa17.27■□□□□ 0.35
LINC00963-216ENST00000623185 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
LINC00963-216ENST00000623185 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
LINC00963-216ENST00000623185 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
LINC00963-216ENST00000623185 POLR3AO14802 1390 aaPredicted RBP17.26■□□□□ 0.35
LINC00963-216ENST00000623185 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
LINC00963-216ENST00000623185 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
LINC00963-216ENST00000623185 HDGFL2Q7Z4V5 671 aaPredicted RBP17.25■□□□□ 0.35
LINC00963-216ENST00000623185 POLR3GLQ9BT43 218 aa17.25■□□□□ 0.35
LINC00963-216ENST00000623185 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
LINC00963-216ENST00000623185 USP32Q8NFA0 1604 aa17.24■□□□□ 0.35
LINC00963-216ENST00000623185 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
LINC00963-216ENST00000623185 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
LINC00963-216ENST00000623185 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
LINC00963-216ENST00000623185 LRRC59Q96AG4 307 aaKnown RBP17.22■□□□□ 0.35
LINC00963-216ENST00000623185 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
LINC00963-216ENST00000623185 PANK3Q9H999 370 aa17.2■□□□□ 0.34
LINC00963-216ENST00000623185 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
LINC00963-216ENST00000623185 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
LINC00963-216ENST00000623185 CARD14Q9BXL6 1004 aa17.18■□□□□ 0.34
LINC00963-216ENST00000623185 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
LINC00963-216ENST00000623185 SBNO1A3KN83 1393 aa17.17■□□□□ 0.34
LINC00963-216ENST00000623185 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
LINC00963-216ENST00000623185 CD163L1Q9NR16 1453 aa17.17■□□□□ 0.34
LINC00963-216ENST00000623185 ROBO1Q9Y6N7 1651 aa17.16■□□□□ 0.34
LINC00963-216ENST00000623185 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
LINC00963-216ENST00000623185 HSPA1LP34931 641 aa17.16■□□□□ 0.34
LINC00963-216ENST00000623185 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
LINC00963-216ENST00000623185 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
LINC00963-216ENST00000623185 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
LINC00963-216ENST00000623185 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
LINC00963-216ENST00000623185 USP6P35125 1406 aa17.15■□□□□ 0.34
LINC00963-216ENST00000623185 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
LINC00963-216ENST00000623185 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
LINC00963-216ENST00000623185 TOPAZ1Q8N9V7 1692 aa17.15■□□□□ 0.34
LINC00963-216ENST00000623185 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
LINC00963-216ENST00000623185 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
LINC00963-216ENST00000623185 AHDC1Q5TGY3 1603 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms