RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CENPQQ7L2Z9 268 aaPredicted RBP15.94■□□□□ 0.14
LITAF-221ENST00000622633 INO80Q9ULG1 1556 aaPredicted RBP15.93■□□□□ 0.14
LITAF-221ENST00000622633 BCAR3O75815 825 aa15.92■□□□□ 0.14
LITAF-221ENST00000622633 TPM2P07951 284 aa15.92■□□□□ 0.14
LITAF-221ENST00000622633 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
LITAF-221ENST00000622633 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
LITAF-221ENST00000622633 KDM5AP29375 1690 aaKnown RBP15.92■□□□□ 0.14
LITAF-221ENST00000622633 ABCA9Q8IUA7 1624 aa15.91■□□□□ 0.14
LITAF-221ENST00000622633 MAP3K4Q9Y6R4 1608 aa15.91■□□□□ 0.14
LITAF-221ENST00000622633 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
LITAF-221ENST00000622633 MYOM2P54296 1465 aa15.9■□□□□ 0.14
LITAF-221ENST00000622633 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
LITAF-221ENST00000622633 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
LITAF-221ENST00000622633 KIAA1210Q9ULL0 1709 aa15.9■□□□□ 0.14
LITAF-221ENST00000622633 E9PSI1 815 aa15.89■□□□□ 0.13
LITAF-221ENST00000622633 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
LITAF-221ENST00000622633 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
LITAF-221ENST00000622633 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
LITAF-221ENST00000622633 SMAP1Q8IYB5 467 aaPredicted RBP15.88■□□□□ 0.13
LITAF-221ENST00000622633 POGKQ9P215 609 aa15.88■□□□□ 0.13
LITAF-221ENST00000622633 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
LITAF-221ENST00000622633 NOS1P29475 1434 aa15.88■□□□□ 0.13
LITAF-221ENST00000622633 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
LITAF-221ENST00000622633 ASXL2Q76L83 1435 aa15.87■□□□□ 0.13
LITAF-221ENST00000622633 SLC12A5Q9H2X9 1139 aa15.87■□□□□ 0.13
LITAF-221ENST00000622633 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
LITAF-221ENST00000622633 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
LITAF-221ENST00000622633 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
LITAF-221ENST00000622633 FAM161AQ3B820 660 aa15.85■□□□□ 0.13
LITAF-221ENST00000622633 GGT6Q6P531 493 aa15.85■□□□□ 0.13
LITAF-221ENST00000622633 DHX37Q8IY37 1157 aaKnown RBP15.85■□□□□ 0.13
LITAF-221ENST00000622633 TMEM51Q9NW97 253 aa15.85■□□□□ 0.13
LITAF-221ENST00000622633 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
LITAF-221ENST00000622633 C8orf34Q49A92 452 aa15.84■□□□□ 0.13
LITAF-221ENST00000622633 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
LITAF-221ENST00000622633 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
LITAF-221ENST00000622633 KIF1BO60333 1816 aa15.84■□□□□ 0.13
LITAF-221ENST00000622633 ZNF830Q96NB3 372 aaPredicted RBP15.84■□□□□ 0.13
LITAF-221ENST00000622633 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
LITAF-221ENST00000622633 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.13
LITAF-221ENST00000622633 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.13
LITAF-221ENST00000622633 RRP7AQ9Y3A4 280 aaKnown RBP15.83■□□□□ 0.12
LITAF-221ENST00000622633 POLR3AO14802 1390 aaPredicted RBP15.83■□□□□ 0.12
LITAF-221ENST00000622633 MROH2AA6NES4 1674 aa15.83■□□□□ 0.12
LITAF-221ENST00000622633 SBNO2Q9Y2G9 1366 aa15.83■□□□□ 0.12
LITAF-221ENST00000622633 XRCC6P12956 609 aaKnown RBP eCLIP15.82■□□□□ 0.12
LITAF-221ENST00000622633 BRD2P25440 801 aaKnown RBP15.82■□□□□ 0.12
LITAF-221ENST00000622633 NGEFQ8N5V2 710 aa15.82■□□□□ 0.12
LITAF-221ENST00000622633 KIDINS220Q9ULH0 1771 aa15.82■□□□□ 0.12
LITAF-221ENST00000622633 IGHDP01880 384 aa15.82■□□□□ 0.12
LITAF-221ENST00000622633 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
LITAF-221ENST00000622633 PANK1Q8TE04 598 aa15.8■□□□□ 0.12
LITAF-221ENST00000622633 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
LITAF-221ENST00000622633 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
LITAF-221ENST00000622633 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
LITAF-221ENST00000622633 NPATQ14207 1427 aa15.79■□□□□ 0.12
LITAF-221ENST00000622633 ADGRB3O60242 1522 aa15.79■□□□□ 0.12
LITAF-221ENST00000622633 LMTK2Q8IWU2 1503 aa15.79■□□□□ 0.12
LITAF-221ENST00000622633 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
LITAF-221ENST00000622633 COG6Q9Y2V7 657 aa15.79■□□□□ 0.12
LITAF-221ENST00000622633 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
LITAF-221ENST00000622633 NCLP19338 710 aaKnown RBP15.78■□□□□ 0.12
LITAF-221ENST00000622633 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
LITAF-221ENST00000622633 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
LITAF-221ENST00000622633 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
LITAF-221ENST00000622633 MTHFSP49914 203 aa15.78■□□□□ 0.12
LITAF-221ENST00000622633 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
LITAF-221ENST00000622633 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
LITAF-221ENST00000622633 MYO3AQ8NEV4 1616 aa15.77■□□□□ 0.12
LITAF-221ENST00000622633 UTP14CQ5TAP6 766 aaKnown RBP15.77■□□□□ 0.11
LITAF-221ENST00000622633 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.11
LITAF-221ENST00000622633 PANK2Q9BZ23 570 aa15.77■□□□□ 0.11
LITAF-221ENST00000622633 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.11
LITAF-221ENST00000622633 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
LITAF-221ENST00000622633 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
LITAF-221ENST00000622633 ESPNB1AK53 854 aa15.76■□□□□ 0.11
LITAF-221ENST00000622633 VGLL3A8MV65 326 aa15.75■□□□□ 0.11
LITAF-221ENST00000622633 CLUAP1Q96AJ1 413 aa15.75■□□□□ 0.11
LITAF-221ENST00000622633 RARSP54136 660 aaKnown RBP15.74■□□□□ 0.11
LITAF-221ENST00000622633 RIPK4P57078 832 aa15.74■□□□□ 0.11
LITAF-221ENST00000622633 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
LITAF-221ENST00000622633 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
LITAF-221ENST00000622633 CD109Q6YHK3 1445 aa15.74■□□□□ 0.11
LITAF-221ENST00000622633 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
LITAF-221ENST00000622633 ADGRB1O14514 1584 aa15.74■□□□□ 0.11
LITAF-221ENST00000622633 DMTNQ08495 405 aa15.74■□□□□ 0.11
LITAF-221ENST00000622633 CHRM1P11229 460 aaPredicted RBP15.73■□□□□ 0.11
LITAF-221ENST00000622633 PPP4R3BQ5MIZ7 849 aa15.73■□□□□ 0.11
LITAF-221ENST00000622633 FSD2A1L4K1 749 aa15.73■□□□□ 0.11
LITAF-221ENST00000622633 KIAA1211Q6ZU35 1233 aa15.73■□□□□ 0.11
LITAF-221ENST00000622633 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
LITAF-221ENST00000622633 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
LITAF-221ENST00000622633 SAFB2Q14151 953 aaKnown RBP eCLIP15.72■□□□□ 0.11
LITAF-221ENST00000622633 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
LITAF-221ENST00000622633 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
LITAF-221ENST00000622633 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
LITAF-221ENST00000622633 PRDM10Q9NQV6 1147 aa15.72■□□□□ 0.11
LITAF-221ENST00000622633 POGZQ7Z3K3 1410 aa15.72■□□□□ 0.11
LITAF-221ENST00000622633 TEX2Q8IWB9 1127 aa15.72■□□□□ 0.11
LITAF-221ENST00000622633 WDR63Q8IWG1 891 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms