RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 TNRQ92752 1358 aa18.56■□□□□ 0.56
EPB42-210ENST00000622454 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
EPB42-210ENST00000622454 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
EPB42-210ENST00000622454 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
EPB42-210ENST00000622454 RCAN3Q9UKA8 241 aa18.55■□□□□ 0.56
EPB42-210ENST00000622454 RIMS2Q9UQ26 1411 aa18.54■□□□□ 0.56
EPB42-210ENST00000622454 NINLQ9Y2I6 1382 aa18.54■□□□□ 0.56
EPB42-210ENST00000622454 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
EPB42-210ENST00000622454 MORC1Q86VD1 984 aa18.54■□□□□ 0.56
EPB42-210ENST00000622454 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
EPB42-210ENST00000622454 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
EPB42-210ENST00000622454 PRAM1Q96QH2 718 aa18.53■□□□□ 0.56
EPB42-210ENST00000622454 B4GALNT3Q6L9W6 998 aa18.52■□□□□ 0.56
EPB42-210ENST00000622454 POGKQ9P215 609 aa18.52■□□□□ 0.56
EPB42-210ENST00000622454 SETD1AO15047 1707 aaKnown RBP18.52■□□□□ 0.55
EPB42-210ENST00000622454 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
EPB42-210ENST00000622454 NSD2O96028 1365 aa18.51■□□□□ 0.55
EPB42-210ENST00000622454 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
EPB42-210ENST00000622454 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
EPB42-210ENST00000622454 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
EPB42-210ENST00000622454 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
EPB42-210ENST00000622454 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
EPB42-210ENST00000622454 PLEKHH1Q9ULM0 1364 aa18.5■□□□□ 0.55
EPB42-210ENST00000622454 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
EPB42-210ENST00000622454 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
EPB42-210ENST00000622454 ZNF521Q96K83 1311 aa18.48■□□□□ 0.55
EPB42-210ENST00000622454 C3P01024 1663 aa18.48■□□□□ 0.55
EPB42-210ENST00000622454 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
EPB42-210ENST00000622454 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
EPB42-210ENST00000622454 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
EPB42-210ENST00000622454 NRXN3Q9Y4C0 1643 aa18.46■□□□□ 0.55
EPB42-210ENST00000622454 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
EPB42-210ENST00000622454 TNNT2P45379 298 aaPredicted RBP18.46■□□□□ 0.55
EPB42-210ENST00000622454 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
EPB42-210ENST00000622454 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
EPB42-210ENST00000622454 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
EPB42-210ENST00000622454 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
EPB42-210ENST00000622454 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
EPB42-210ENST00000622454 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
EPB42-210ENST00000622454 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
EPB42-210ENST00000622454 NLRP1Q9C000 1473 aa18.43■□□□□ 0.54
EPB42-210ENST00000622454 APAF1O14727 1248 aa18.43■□□□□ 0.54
EPB42-210ENST00000622454 TMEM2Q9UHN6 1383 aa18.43■□□□□ 0.54
EPB42-210ENST00000622454 ANKRD26Q9UPS8 1709 aa18.42■□□□□ 0.54
EPB42-210ENST00000622454 CDK19Q9BWU1 502 aa18.42■□□□□ 0.54
EPB42-210ENST00000622454 MTHFSP49914 203 aa18.42■□□□□ 0.54
EPB42-210ENST00000622454 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
EPB42-210ENST00000622454 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
EPB42-210ENST00000622454 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
EPB42-210ENST00000622454 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
EPB42-210ENST00000622454 KNDC1Q76NI1 1749 aa18.39■□□□□ 0.53
EPB42-210ENST00000622454 SLFN5Q08AF3 891 aa18.39■□□□□ 0.53
EPB42-210ENST00000622454 MED14O60244 1454 aa18.39■□□□□ 0.53
EPB42-210ENST00000622454 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
EPB42-210ENST00000622454 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
EPB42-210ENST00000622454 METP08581 1390 aa18.37■□□□□ 0.53
EPB42-210ENST00000622454 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
EPB42-210ENST00000622454 KIF20BQ96Q89 1820 aa18.37■□□□□ 0.53
EPB42-210ENST00000622454 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
EPB42-210ENST00000622454 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
EPB42-210ENST00000622454 CABP1Q9NZU7 370 aa18.35■□□□□ 0.53
EPB42-210ENST00000622454 FYB1O15117 783 aa18.35■□□□□ 0.53
EPB42-210ENST00000622454 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
EPB42-210ENST00000622454 E9PSI1 815 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 LTKP29376 864 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 ATP7BP35670 1465 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
EPB42-210ENST00000622454 TECPR2O15040 1411 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 SIRT1Q96EB6 747 aa18.34■□□□□ 0.53
EPB42-210ENST00000622454 PLIN1O60240 522 aa18.33■□□□□ 0.53
EPB42-210ENST00000622454 CPS1P31327 1500 aa18.33■□□□□ 0.52
EPB42-210ENST00000622454 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
EPB42-210ENST00000622454 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
EPB42-210ENST00000622454 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
EPB42-210ENST00000622454 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
EPB42-210ENST00000622454 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
EPB42-210ENST00000622454 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
EPB42-210ENST00000622454 WASLO00401 505 aaPredicted RBP18.31■□□□□ 0.52
EPB42-210ENST00000622454 THEMISQ8N1K5 641 aaPredicted RBP18.3■□□□□ 0.52
EPB42-210ENST00000622454 TCP11L2Q8N4U5 519 aa18.3■□□□□ 0.52
EPB42-210ENST00000622454 SLIT1O75093 1534 aa18.3■□□□□ 0.52
EPB42-210ENST00000622454 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
EPB42-210ENST00000622454 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
EPB42-210ENST00000622454 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
EPB42-210ENST00000622454 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
EPB42-210ENST00000622454 MYT1Q01538 1121 aa18.28■□□□□ 0.52
EPB42-210ENST00000622454 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
EPB42-210ENST00000622454 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
EPB42-210ENST00000622454 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
EPB42-210ENST00000622454 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
EPB42-210ENST00000622454 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.52
EPB42-210ENST00000622454 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
EPB42-210ENST00000622454 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.51
EPB42-210ENST00000622454 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
EPB42-210ENST00000622454 CPSF1Q10570 1443 aaKnown RBP18.26■□□□□ 0.51
EPB42-210ENST00000622454 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
EPB42-210ENST00000622454 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
EPB42-210ENST00000622454 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms