RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NSD2O96028 1365 aa12.55□□□□□ -0.4
IGHV3-54-201ENST00000622166 RICTORQ6R327 1708 aa12.54□□□□□ -0.4
IGHV3-54-201ENST00000622166 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
IGHV3-54-201ENST00000622166 TRAK1Q9UPV9 953 aa12.54□□□□□ -0.4
IGHV3-54-201ENST00000622166 TULP4Q9NRJ4 1543 aa12.53□□□□□ -0.4
IGHV3-54-201ENST00000622166 GGT6Q6P531 493 aa12.53□□□□□ -0.4
IGHV3-54-201ENST00000622166 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
IGHV3-54-201ENST00000622166 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-54-201ENST00000622166 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
IGHV3-54-201ENST00000622166 PDE3AQ14432 1141 aa12.52□□□□□ -0.41
IGHV3-54-201ENST00000622166 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
IGHV3-54-201ENST00000622166 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
IGHV3-54-201ENST00000622166 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
IGHV3-54-201ENST00000622166 SLC12A5Q9H2X9 1139 aa12.51□□□□□ -0.41
IGHV3-54-201ENST00000622166 CGNL1Q0VF96 1302 aa12.51□□□□□ -0.41
IGHV3-54-201ENST00000622166 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
IGHV3-54-201ENST00000622166 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
IGHV3-54-201ENST00000622166 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
IGHV3-54-201ENST00000622166 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
IGHV3-54-201ENST00000622166 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
IGHV3-54-201ENST00000622166 CLTCQ00610 1675 aaKnown RBP12.49□□□□□ -0.41
IGHV3-54-201ENST00000622166 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
IGHV3-54-201ENST00000622166 DEKP35659 375 aaKnown RBP12.49□□□□□ -0.41
IGHV3-54-201ENST00000622166 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
IGHV3-54-201ENST00000622166 NPM2Q86SE8 214 aaKnown RBP12.49□□□□□ -0.41
IGHV3-54-201ENST00000622166 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
IGHV3-54-201ENST00000622166 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 BCAR3O75815 825 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 AAMPQ13685 434 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 CFAP53Q96M91 514 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
IGHV3-54-201ENST00000622166 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
IGHV3-54-201ENST00000622166 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
IGHV3-54-201ENST00000622166 NBR1Q14596 966 aa12.46□□□□□ -0.41
IGHV3-54-201ENST00000622166 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
IGHV3-54-201ENST00000622166 SKAP1Q86WV1 359 aa12.46□□□□□ -0.41
IGHV3-54-201ENST00000622166 MED14O60244 1454 aa12.46□□□□□ -0.42
IGHV3-54-201ENST00000622166 MTHFSP49914 203 aa12.45□□□□□ -0.42
IGHV3-54-201ENST00000622166 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
IGHV3-54-201ENST00000622166 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
IGHV3-54-201ENST00000622166 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
IGHV3-54-201ENST00000622166 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
IGHV3-54-201ENST00000622166 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
IGHV3-54-201ENST00000622166 IDI1Q13907 227 aa12.44□□□□□ -0.42
IGHV3-54-201ENST00000622166 PTPRMP28827 1452 aa12.44□□□□□ -0.42
IGHV3-54-201ENST00000622166 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
IGHV3-54-201ENST00000622166 RARSP54136 660 aaKnown RBP12.43□□□□□ -0.42
IGHV3-54-201ENST00000622166 CLUAP1Q96AJ1 413 aa12.42□□□□□ -0.42
IGHV3-54-201ENST00000622166 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
IGHV3-54-201ENST00000622166 REREQ9P2R6 1566 aa12.42□□□□□ -0.42
IGHV3-54-201ENST00000622166 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
IGHV3-54-201ENST00000622166 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
IGHV3-54-201ENST00000622166 IGHDP01880 384 aa12.41□□□□□ -0.42
IGHV3-54-201ENST00000622166 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
IGHV3-54-201ENST00000622166 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 TNNT2P45379 298 aaPredicted RBP12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 CABP2Q9NPB3 220 aa12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 DLC1Q96QB1 1528 aa12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
IGHV3-54-201ENST00000622166 NLRP1Q9C000 1473 aa12.4□□□□□ -0.43
IGHV3-54-201ENST00000622166 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.43
IGHV3-54-201ENST00000622166 AGLP35573 1532 aa12.39□□□□□ -0.43
IGHV3-54-201ENST00000622166 PANK1Q8TE04 598 aa12.39□□□□□ -0.43
IGHV3-54-201ENST00000622166 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
IGHV3-54-201ENST00000622166 ALKQ9UM73 1620 aa12.39□□□□□ -0.43
IGHV3-54-201ENST00000622166 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
IGHV3-54-201ENST00000622166 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
IGHV3-54-201ENST00000622166 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
IGHV3-54-201ENST00000622166 COG6Q9Y2V7 657 aa12.38□□□□□ -0.43
IGHV3-54-201ENST00000622166 CDC42BPGQ6DT37 1551 aa12.38□□□□□ -0.43
IGHV3-54-201ENST00000622166 IL16Q14005 1332 aa12.37□□□□□ -0.43
IGHV3-54-201ENST00000622166 RGS3P49796 1198 aa12.37□□□□□ -0.43
IGHV3-54-201ENST00000622166 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
IGHV3-54-201ENST00000622166 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
IGHV3-54-201ENST00000622166 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
IGHV3-54-201ENST00000622166 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
IGHV3-54-201ENST00000622166 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
IGHV3-54-201ENST00000622166 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
IGHV3-54-201ENST00000622166 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
IGHV3-54-201ENST00000622166 LAS1LQ9Y4W2 734 aaKnown RBP12.36□□□□□ -0.43
IGHV3-54-201ENST00000622166 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
IGHV3-54-201ENST00000622166 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
IGHV3-54-201ENST00000622166 NEFMP07197 916 aa12.35□□□□□ -0.43
IGHV3-54-201ENST00000622166 SRPK2P78362 688 aaKnown RBP12.35□□□□□ -0.43
IGHV3-54-201ENST00000622166 FYB1O15117 783 aa12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 RLBP1P12271 317 aa12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 TMPOP42166 694 aaKnown RBP12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 PNNQ9H307 717 aaKnown RBP12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 STK26Q9P289 416 aa12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 USP19O94966 1318 aa12.34□□□□□ -0.43
IGHV3-54-201ENST00000622166 ZKSCAN2Q63HK3 967 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms