RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 RIPK4P57078 832 aa11.22□□□□□ -0.61
ITSN2-213ENST00000622089 CCDC191Q8NCU4 936 aa11.21□□□□□ -0.61
ITSN2-213ENST00000622089 CCDC43Q96MW1 224 aaKnown RBP11.21□□□□□ -0.61
ITSN2-213ENST00000622089 ELL2O00472 640 aaPredicted RBP11.21□□□□□ -0.61
ITSN2-213ENST00000622089 NAP1L1P55209 391 aaKnown RBP11.21□□□□□ -0.62
ITSN2-213ENST00000622089 CNTLNQ9NXG0 1405 aa11.2□□□□□ -0.62
ITSN2-213ENST00000622089 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
ITSN2-213ENST00000622089 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
ITSN2-213ENST00000622089 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
ITSN2-213ENST00000622089 RALYLQ86SE5 291 aaKnown RBP11.2□□□□□ -0.62
ITSN2-213ENST00000622089 VPS37DQ86XT2 251 aa11.2□□□□□ -0.62
ITSN2-213ENST00000622089 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
ITSN2-213ENST00000622089 HIP1O00291 1037 aa11.2□□□□□ -0.62
ITSN2-213ENST00000622089 DHX16O60231 1041 aaKnown RBP11.2□□□□□ -0.62
ITSN2-213ENST00000622089 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 ODF2Q5BJF6 829 aa11.19□□□□□ -0.62
ITSN2-213ENST00000622089 CAGE1Q8TC20 777 aa11.19□□□□□ -0.62
ITSN2-213ENST00000622089 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 CNTROBQ8N137 903 aa11.19□□□□□ -0.62
ITSN2-213ENST00000622089 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 EPS15P42566 896 aa11.19□□□□□ -0.62
ITSN2-213ENST00000622089 EVA1CP58658 441 aa11.19□□□□□ -0.62
ITSN2-213ENST00000622089 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 TSPY26PQ9H489 355 aa11.19□□□□□ -0.62
ITSN2-213ENST00000622089 BRD4O60885 1362 aaPredicted RBP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
ITSN2-213ENST00000622089 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
ITSN2-213ENST00000622089 FILIP1LQ4L180 1135 aa11.17□□□□□ -0.62
ITSN2-213ENST00000622089 PDCP20941 246 aa11.17□□□□□ -0.62
ITSN2-213ENST00000622089 ZNF396Q96N95 335 aaPredicted RBP11.17□□□□□ -0.62
ITSN2-213ENST00000622089 R3HCC1Q9Y3T6 440 aaKnown RBP11.17□□□□□ -0.62
ITSN2-213ENST00000622089 CCDC7Q96M83 1385 aa11.17□□□□□ -0.62
ITSN2-213ENST00000622089 TXLNBQ8N3L3 684 aa11.17□□□□□ -0.62
ITSN2-213ENST00000622089 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
ITSN2-213ENST00000622089 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
ITSN2-213ENST00000622089 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
ITSN2-213ENST00000622089 OFD1O75665 1012 aa11.16□□□□□ -0.62
ITSN2-213ENST00000622089 H0YHG0 523 aa11.16□□□□□ -0.62
ITSN2-213ENST00000622089 RABEP1Q15276 862 aa11.16□□□□□ -0.62
ITSN2-213ENST00000622089 PDILTQ8N807 584 aa11.16□□□□□ -0.62
ITSN2-213ENST00000622089 SCAPERQ9BY12 1400 aa11.16□□□□□ -0.62
ITSN2-213ENST00000622089 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
ITSN2-213ENST00000622089 LEKR1Q6ZMV7 388 aa11.15□□□□□ -0.62
ITSN2-213ENST00000622089 RAD21O60216 631 aa11.15□□□□□ -0.62
ITSN2-213ENST00000622089 MAGEC2Q9UBF1 373 aaPredicted RBP11.15□□□□□ -0.62
ITSN2-213ENST00000622089 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.63
ITSN2-213ENST00000622089 SDF4Q9BRK5 362 aa11.15□□□□□ -0.63
ITSN2-213ENST00000622089 CWC22Q9HCG8 908 aaKnown RBP11.15□□□□□ -0.63
ITSN2-213ENST00000622089 TRAK2O60296 914 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 KINO60870 393 aaKnown RBP11.14□□□□□ -0.63
ITSN2-213ENST00000622089 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
ITSN2-213ENST00000622089 ERC1Q8IUD2 1116 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.14□□□□□ -0.63
ITSN2-213ENST00000622089 DACH1Q9UI36 760 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 ERLIN2O94905 339 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 GNAI3P08754 354 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
ITSN2-213ENST00000622089 AEBP1Q8IUX7 1158 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
ITSN2-213ENST00000622089 TXLNAP40222 546 aa11.13□□□□□ -0.63
ITSN2-213ENST00000622089 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
ITSN2-213ENST00000622089 LNPKQ9C0E8 428 aa11.13□□□□□ -0.63
ITSN2-213ENST00000622089 CADPSQ9ULU8 1353 aa11.13□□□□□ -0.63
ITSN2-213ENST00000622089 ZRSR2Q15696 482 aaKnown RBP11.13□□□□□ -0.63
ITSN2-213ENST00000622089 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 SMC2O95347 1197 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 LUC7LQ9NQ29 371 aaKnown RBP11.12□□□□□ -0.63
ITSN2-213ENST00000622089 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 SLC3A2P08195 630 aaKnown RBP11.12□□□□□ -0.63
ITSN2-213ENST00000622089 RBM33Q96EV2 1170 aaKnown RBP11.12□□□□□ -0.63
ITSN2-213ENST00000622089 TBC1D2BQ9UPU7 963 aa11.12□□□□□ -0.63
ITSN2-213ENST00000622089 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
ITSN2-213ENST00000622089 ANKRD1Q15327 319 aa11.11□□□□□ -0.63
ITSN2-213ENST00000622089 FSD1Q9BTV5 496 aa11.11□□□□□ -0.63
ITSN2-213ENST00000622089 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
ITSN2-213ENST00000622089 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
ITSN2-213ENST00000622089 CBFA2T2O43439 604 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 ANKRD18AQ8IVF6 992 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
ITSN2-213ENST00000622089 WIZO95785 1651 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 GOLGA6L10A6NI86 522 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 FOSBP53539 338 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 ERLIN1O75477 346 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 CLASRPQ8N2M8 674 aaKnown RBP11.1□□□□□ -0.63
ITSN2-213ENST00000622089 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 PDIA4P13667 645 aaKnown RBP11.1□□□□□ -0.63
ITSN2-213ENST00000622089 CDK5RAP3Q96JB5 506 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
ITSN2-213ENST00000622089 RRBP1Q9P2E9 1410 aaKnown RBP11.09□□□□□ -0.63
ITSN2-213ENST00000622089 FYCO1Q9BQS8 1478 aa11.09□□□□□ -0.63
ITSN2-213ENST00000622089 GOLGA6L7A0A1B0GV03 622 aa11.09□□□□□ -0.63
ITSN2-213ENST00000622089 PSME1Q06323 249 aa11.09□□□□□ -0.63
ITSN2-213ENST00000622089 EIF3JO75822 258 aaKnown RBP11.09□□□□□ -0.63
ITSN2-213ENST00000622089 CT47B1P0C2W7 299 aaPredicted RBP11.09□□□□□ -0.63
ITSN2-213ENST00000622089 CCDC192P0DO97 292 aa11.09□□□□□ -0.63
ITSN2-213ENST00000622089 PTPRGP23470 1445 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms