RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 BRPF1P55201 1214 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-209ENST00000621104 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
CCDC144B-209ENST00000621104 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
CCDC144B-209ENST00000621104 S1PR4O95977 384 aa8.68□□□□□ -1.02
CCDC144B-209ENST00000621104 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
CCDC144B-209ENST00000621104 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
CCDC144B-209ENST00000621104 USB1Q9BQ65 265 aaKnown RBP8.68□□□□□ -1.02
CCDC144B-209ENST00000621104 FAM117AQ9C073 453 aa8.68□□□□□ -1.02
CCDC144B-209ENST00000621104 PCDHGC3Q9UN70 934 aa8.68□□□□□ -1.02
CCDC144B-209ENST00000621104 SPDYE5A6NIY4 337 aa8.67□□□□□ -1.02
CCDC144B-209ENST00000621104 LCE2BO14633 110 aa8.67□□□□□ -1.02
CCDC144B-209ENST00000621104 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
CCDC144B-209ENST00000621104 NDUFV2P19404 249 aa8.67□□□□□ -1.02
CCDC144B-209ENST00000621104 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
CCDC144B-209ENST00000621104 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
CCDC144B-209ENST00000621104 MMP16P51512 607 aa8.66□□□□□ -1.02
CCDC144B-209ENST00000621104 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
CCDC144B-209ENST00000621104 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
CCDC144B-209ENST00000621104 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
CCDC144B-209ENST00000621104 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
CCDC144B-209ENST00000621104 MTMR2Q13614 643 aa8.65□□□□□ -1.02
CCDC144B-209ENST00000621104 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
CCDC144B-209ENST00000621104 DXOO77932 396 aaKnown RBP8.64□□□□□ -1.03
CCDC144B-209ENST00000621104 GOPCQ9HD26 462 aa8.64□□□□□ -1.03
CCDC144B-209ENST00000621104 C6orf229H3BNL8 230 aa8.63□□□□□ -1.03
CCDC144B-209ENST00000621104 ZBTB3Q9H5J0 574 aa8.63□□□□□ -1.03
CCDC144B-209ENST00000621104 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
CCDC144B-209ENST00000621104 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
CCDC144B-209ENST00000621104 V9GY48 417 aaPredicted RBP8.63□□□□□ -1.03
CCDC144B-209ENST00000621104 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
CCDC144B-209ENST00000621104 DESI1Q6ICB0 168 aa8.62□□□□□ -1.03
CCDC144B-209ENST00000621104 SYMPKQ92797 1274 aaKnown RBP8.62□□□□□ -1.03
CCDC144B-209ENST00000621104 JUNDP17535 347 aa8.61□□□□□ -1.03
CCDC144B-209ENST00000621104 HRCP23327 699 aa8.6□□□□□ -1.03
CCDC144B-209ENST00000621104 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
CCDC144B-209ENST00000621104 PPEF1O14829 653 aaPredicted RBP8.59□□□□□ -1.03
CCDC144B-209ENST00000621104 LILRB3O75022 631 aa8.59□□□□□ -1.03
CCDC144B-209ENST00000621104 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
CCDC144B-209ENST00000621104 FCF1Q9Y324 198 aaKnown RBP8.59□□□□□ -1.03
CCDC144B-209ENST00000621104 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC144B-209ENST00000621104 PRKD2Q9BZL6 878 aa8.58□□□□□ -1.04
CCDC144B-209ENST00000621104 QPCTQ16769 361 aa8.57□□□□□ -1.04
CCDC144B-209ENST00000621104 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
CCDC144B-209ENST00000621104 RPIAP49247 311 aa8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 PTPRNQ16849 979 aa8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
CCDC144B-209ENST00000621104 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
CCDC144B-209ENST00000621104 SLC19A1P41440 591 aa8.55□□□□□ -1.04
CCDC144B-209ENST00000621104 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
CCDC144B-209ENST00000621104 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
CCDC144B-209ENST00000621104 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
CCDC144B-209ENST00000621104 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
CCDC144B-209ENST00000621104 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
CCDC144B-209ENST00000621104 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
CCDC144B-209ENST00000621104 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
CCDC144B-209ENST00000621104 CCNYL3P0C7X3 344 aa8.53□□□□□ -1.04
CCDC144B-209ENST00000621104 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
CCDC144B-209ENST00000621104 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
CCDC144B-209ENST00000621104 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
CCDC144B-209ENST00000621104 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
CCDC144B-209ENST00000621104 LYPD8Q6UX82 237 aa8.52□□□□□ -1.05
CCDC144B-209ENST00000621104 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
CCDC144B-209ENST00000621104 ZBTB24O43167 697 aaPredicted RBP8.51□□□□□ -1.05
CCDC144B-209ENST00000621104 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
CCDC144B-209ENST00000621104 ZNF598Q86UK7 904 aaKnown RBP8.51□□□□□ -1.05
CCDC144B-209ENST00000621104 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
CCDC144B-209ENST00000621104 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
CCDC144B-209ENST00000621104 LOC100996750A0A140TA64 210 aa8.49□□□□□ -1.05
CCDC144B-209ENST00000621104 CD2BP2O95400 341 aaKnown RBP8.49□□□□□ -1.05
CCDC144B-209ENST00000621104 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
CCDC144B-209ENST00000621104 KRTAP4-6Q9BYQ5 205 aa8.49□□□□□ -1.05
CCDC144B-209ENST00000621104 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
CCDC144B-209ENST00000621104 KCNH2Q12809 1159 aa8.48□□□□□ -1.05
CCDC144B-209ENST00000621104 TRIM32Q13049 653 aa8.48□□□□□ -1.05
CCDC144B-209ENST00000621104 ZNF697Q5TEC3 545 aa8.48□□□□□ -1.05
CCDC144B-209ENST00000621104 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
CCDC144B-209ENST00000621104 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
CCDC144B-209ENST00000621104 WNT7BP56706 349 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 PRR20EP86478 221 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 PRR20CP86479 221 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 PRR20DP86480 221 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 PRR20BP86481 221 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 PRR20AP86496 221 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 TSC1Q92574 1164 aa8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 ATP1B4Q9UN42 357 aaPredicted RBP8.46□□□□□ -1.06
CCDC144B-209ENST00000621104 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
CCDC144B-209ENST00000621104 RFC5P40937 340 aa8.45□□□□□ -1.06
CCDC144B-209ENST00000621104 UNC93B1Q9H1C4 597 aa8.45□□□□□ -1.06
CCDC144B-209ENST00000621104 PTCRAQ6ISU1 281 aaPredicted RBP8.44□□□□□ -1.06
CCDC144B-209ENST00000621104 GDF9O60383 454 aa8.43□□□□□ -1.06
CCDC144B-209ENST00000621104 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
CCDC144B-209ENST00000621104 TRIM67Q6ZTA4 783 aa8.43□□□□□ -1.06
CCDC144B-209ENST00000621104 NRG2O14511 850 aaPredicted RBP8.42□□□□□ -1.06
CCDC144B-209ENST00000621104 CTHP32929 405 aa8.42□□□□□ -1.06
CCDC144B-209ENST00000621104 CTDSPL2Q05D32 466 aa8.42□□□□□ -1.06
CCDC144B-209ENST00000621104 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms