RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CENPJQ9HC77 1338 aaPredicted RBP19.31■□□□□ 0.68
NEK3-210ENST00000620675 CERKQ8TCT0 537 aa19.31■□□□□ 0.68
NEK3-210ENST00000620675 ADGRL3Q9HAR2 1447 aa19.3■□□□□ 0.68
NEK3-210ENST00000620675 RGPD8O14715 1765 aaPredicted RBP19.3■□□□□ 0.68
NEK3-210ENST00000620675 ZEB1P37275 1124 aaPredicted RBP19.29■□□□□ 0.68
NEK3-210ENST00000620675 HSPA5P11021 654 aaKnown RBP19.27■□□□□ 0.68
NEK3-210ENST00000620675 EIF3AQ14152 1382 aaKnown RBP19.26■□□□□ 0.67
NEK3-210ENST00000620675 ADGRB2O60241 1585 aa19.26■□□□□ 0.67
NEK3-210ENST00000620675 TULP4Q9NRJ4 1543 aa19.26■□□□□ 0.67
NEK3-210ENST00000620675 NUTM2FA1L443 756 aa19.26■□□□□ 0.67
NEK3-210ENST00000620675 TESK2Q96S53 571 aa19.26■□□□□ 0.67
NEK3-210ENST00000620675 C19orf44Q9H6X5 657 aa19.26■□□□□ 0.67
NEK3-210ENST00000620675 NCOA3Q9Y6Q9 1424 aa19.25■□□□□ 0.67
NEK3-210ENST00000620675 FMN2Q9NZ56 1722 aa19.25■□□□□ 0.67
NEK3-210ENST00000620675 MSH6P52701 1360 aa19.25■□□□□ 0.67
NEK3-210ENST00000620675 CDC42BPGQ6DT37 1551 aa19.25■□□□□ 0.67
NEK3-210ENST00000620675 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
NEK3-210ENST00000620675 USP32Q8NFA0 1604 aa19.23■□□□□ 0.67
NEK3-210ENST00000620675 IQSEC2Q5JU85 1478 aa19.2■□□□□ 0.66
NEK3-210ENST00000620675 WASLO00401 505 aaPredicted RBP19.2■□□□□ 0.66
NEK3-210ENST00000620675 CDK19Q9BWU1 502 aa19.2■□□□□ 0.66
NEK3-210ENST00000620675 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
NEK3-210ENST00000620675 MST1RQ04912 1400 aa19.19■□□□□ 0.66
NEK3-210ENST00000620675 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
NEK3-210ENST00000620675 ATF3P18847 181 aa19.19■□□□□ 0.66
NEK3-210ENST00000620675 DCCP43146 1447 aa19.19■□□□□ 0.66
NEK3-210ENST00000620675 PRR36Q9H6K5 1346 aa19.19■□□□□ 0.66
NEK3-210ENST00000620675 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
NEK3-210ENST00000620675 C11orf95C9JLR9 678 aaPredicted RBP19.17■□□□□ 0.66
NEK3-210ENST00000620675 UBAP1LF5GYI3 381 aa19.17■□□□□ 0.66
NEK3-210ENST00000620675 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
NEK3-210ENST00000620675 C1orf167Q5SNV9 1468 aa19.16■□□□□ 0.66
NEK3-210ENST00000620675 ATP7BP35670 1465 aa19.15■□□□□ 0.66
NEK3-210ENST00000620675 SLAIN2Q9P270 581 aa19.15■□□□□ 0.66
NEK3-210ENST00000620675 ORAI2Q96SN7 254 aa19.15■□□□□ 0.66
NEK3-210ENST00000620675 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
NEK3-210ENST00000620675 SRPK2P78362 688 aaKnown RBP19.14■□□□□ 0.65
NEK3-210ENST00000620675 EVC2Q86UK5 1308 aa19.14■□□□□ 0.65
NEK3-210ENST00000620675 TOPAZ1Q8N9V7 1692 aa19.14■□□□□ 0.65
NEK3-210ENST00000620675 ROBO1Q9Y6N7 1651 aa19.14■□□□□ 0.65
NEK3-210ENST00000620675 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
NEK3-210ENST00000620675 ITSN1Q15811 1721 aa19.11■□□□□ 0.65
NEK3-210ENST00000620675 TOM1O60784 492 aa19.11■□□□□ 0.65
NEK3-210ENST00000620675 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
NEK3-210ENST00000620675 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
NEK3-210ENST00000620675 TMF1P82094 1093 aa19.1■□□□□ 0.65
NEK3-210ENST00000620675 ESCO1Q5FWF5 840 aa19.1■□□□□ 0.65
NEK3-210ENST00000620675 BRINP3Q76B58 766 aa19.1■□□□□ 0.65
NEK3-210ENST00000620675 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
NEK3-210ENST00000620675 MYOM1P52179 1685 aa19.09■□□□□ 0.65
NEK3-210ENST00000620675 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
NEK3-210ENST00000620675 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
NEK3-210ENST00000620675 PPIP5K1Q6PFW1 1433 aa19.06■□□□□ 0.64
NEK3-210ENST00000620675 CABP1Q9NZU7 370 aa19.05■□□□□ 0.64
NEK3-210ENST00000620675 CCDC61Q9Y6R9 512 aa19.05■□□□□ 0.64
NEK3-210ENST00000620675 KIF7Q2M1P5 1343 aa19.04■□□□□ 0.64
NEK3-210ENST00000620675 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
NEK3-210ENST00000620675 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
NEK3-210ENST00000620675 KIF1AQ12756 1690 aa19.04■□□□□ 0.64
NEK3-210ENST00000620675 FOXO3O43524 673 aa19.04■□□□□ 0.64
NEK3-210ENST00000620675 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
NEK3-210ENST00000620675 PHF8Q9UPP1 1060 aa19.04■□□□□ 0.64
NEK3-210ENST00000620675 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
NEK3-210ENST00000620675 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
NEK3-210ENST00000620675 AKAP12Q02952 1782 aa19.02■□□□□ 0.64
NEK3-210ENST00000620675 ATAD2Q6PL18 1390 aa19.02■□□□□ 0.64
NEK3-210ENST00000620675 CD163L1Q9NR16 1453 aa19.01■□□□□ 0.63
NEK3-210ENST00000620675 ACEP12821 1306 aa19■□□□□ 0.63
NEK3-210ENST00000620675 PHLPP1O60346 1717 aa19■□□□□ 0.63
NEK3-210ENST00000620675 CCDC7Q96M83 1385 aa19■□□□□ 0.63
NEK3-210ENST00000620675 PLEKHG3A1L390 1219 aa18.99■□□□□ 0.63
NEK3-210ENST00000620675 SLC24A1O60721 1099 aa18.99■□□□□ 0.63
NEK3-210ENST00000620675 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
NEK3-210ENST00000620675 AHDC1Q5TGY3 1603 aaPredicted RBP18.98■□□□□ 0.63
NEK3-210ENST00000620675 MON2Q7Z3U7 1717 aa18.98■□□□□ 0.63
NEK3-210ENST00000620675 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
NEK3-210ENST00000620675 PXDNQ92626 1479 aa18.97■□□□□ 0.63
NEK3-210ENST00000620675 TRPM3Q9HCF6 1732 aaPredicted RBP18.97■□□□□ 0.63
NEK3-210ENST00000620675 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
NEK3-210ENST00000620675 FBXO41Q8TF61 875 aa18.97■□□□□ 0.63
NEK3-210ENST00000620675 POLR3AO14802 1390 aaPredicted RBP18.97■□□□□ 0.63
NEK3-210ENST00000620675 COL16A1Q07092 1604 aaPredicted RBP18.97■□□□□ 0.63
NEK3-210ENST00000620675 A0A1W2PP64 1363 aa18.96■□□□□ 0.63
NEK3-210ENST00000620675 CPSF1Q10570 1443 aaKnown RBP18.95■□□□□ 0.62
NEK3-210ENST00000620675 HSPA1LP34931 641 aa18.95■□□□□ 0.62
NEK3-210ENST00000620675 KRT28Q7Z3Y7 464 aa18.94■□□□□ 0.62
NEK3-210ENST00000620675 NRKQ7Z2Y5 1582 aa18.94■□□□□ 0.62
NEK3-210ENST00000620675 NPHP3Q7Z494 1330 aa18.93■□□□□ 0.62
NEK3-210ENST00000620675 PSME1Q06323 249 aa18.93■□□□□ 0.62
NEK3-210ENST00000620675 SOS2Q07890 1332 aaPredicted RBP18.93■□□□□ 0.62
NEK3-210ENST00000620675 USP6P35125 1406 aa18.92■□□□□ 0.62
NEK3-210ENST00000620675 KTN1Q86UP2 1357 aaKnown RBP18.91■□□□□ 0.62
NEK3-210ENST00000620675 ALS2Q96Q42 1657 aa18.91■□□□□ 0.62
NEK3-210ENST00000620675 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
NEK3-210ENST00000620675 ANKRD36BQ8N2N9 1353 aa18.9■□□□□ 0.62
NEK3-210ENST00000620675 NINLQ9Y2I6 1382 aa18.9■□□□□ 0.62
NEK3-210ENST00000620675 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
NEK3-210ENST00000620675 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.62
NEK3-210ENST00000620675 PANK3Q9H999 370 aa18.89■□□□□ 0.61
NEK3-210ENST00000620675 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms