RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
PCGF3-213ENST00000620529 PER1O15534 1290 aaPredicted RBP22.62■■□□□ 1.21
PCGF3-213ENST00000620529 SRPK2P78362 688 aaKnown RBP22.62■■□□□ 1.21
PCGF3-213ENST00000620529 PLEKHH1Q9ULM0 1364 aa22.61■■□□□ 1.21
PCGF3-213ENST00000620529 KNSTRNQ9Y448 316 aa22.61■■□□□ 1.21
PCGF3-213ENST00000620529 TMC1Q8TDI8 760 aa22.6■■□□□ 1.21
PCGF3-213ENST00000620529 ATAD2Q6PL18 1390 aa22.59■■□□□ 1.21
PCGF3-213ENST00000620529 CABP2Q9NPB3 220 aa22.59■■□□□ 1.21
PCGF3-213ENST00000620529 PTPRUQ92729 1446 aa22.58■■□□□ 1.21
PCGF3-213ENST00000620529 RALBP1Q15311 655 aa22.58■■□□□ 1.21
PCGF3-213ENST00000620529 PIK3R4Q99570 1358 aa22.58■■□□□ 1.21
PCGF3-213ENST00000620529 NINLQ9Y2I6 1382 aa22.57■■□□□ 1.2
PCGF3-213ENST00000620529 AMOTL2Q9Y2J4 779 aa22.57■■□□□ 1.2
PCGF3-213ENST00000620529 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
PCGF3-213ENST00000620529 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
PCGF3-213ENST00000620529 NPHP4O75161 1426 aaPredicted RBP22.55■■□□□ 1.2
PCGF3-213ENST00000620529 XRN1Q8IZH2 1706 aaKnown RBP22.55■■□□□ 1.2
PCGF3-213ENST00000620529 KDM4FA0A1W2PPD8 638 aa22.55■■□□□ 1.2
PCGF3-213ENST00000620529 PTCH1Q13635 1447 aa22.55■■□□□ 1.2
PCGF3-213ENST00000620529 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
PCGF3-213ENST00000620529 SLC12A5Q9H2X9 1139 aa22.54■■□□□ 1.2
PCGF3-213ENST00000620529 CC2D1BQ5T0F9 858 aaKnown RBP22.54■■□□□ 1.2
PCGF3-213ENST00000620529 PARD3Q8TEW0 1356 aa22.53■■□□□ 1.2
PCGF3-213ENST00000620529 CHD2O14647 1828 aaKnown RBP22.53■■□□□ 1.2
PCGF3-213ENST00000620529 MYBBP1AQ9BQG0 1328 aaKnown RBP22.52■■□□□ 1.2
PCGF3-213ENST00000620529 CENPBP07199 599 aaPredicted RBP22.52■■□□□ 1.2
PCGF3-213ENST00000620529 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
PCGF3-213ENST00000620529 ADGRB2O60241 1585 aa22.51■■□□□ 1.19
PCGF3-213ENST00000620529 ANKRD36BQ8N2N9 1353 aa22.51■■□□□ 1.19
PCGF3-213ENST00000620529 WASLO00401 505 aaPredicted RBP22.51■■□□□ 1.19
PCGF3-213ENST00000620529 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
PCGF3-213ENST00000620529 NPC1L1Q9UHC9 1359 aa22.5■■□□□ 1.19
PCGF3-213ENST00000620529 NCKAP5LQ9HCH0 1330 aa22.49■■□□□ 1.19
PCGF3-213ENST00000620529 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
PCGF3-213ENST00000620529 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
PCGF3-213ENST00000620529 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
PCGF3-213ENST00000620529 USP32Q8NFA0 1604 aa22.47■■□□□ 1.19
PCGF3-213ENST00000620529 CCDC184Q52MB2 194 aa22.46■■□□□ 1.19
PCGF3-213ENST00000620529 TERF2IPQ9NYB0 399 aa22.46■■□□□ 1.19
PCGF3-213ENST00000620529 KCNA6P17658 529 aa22.45■■□□□ 1.19
PCGF3-213ENST00000620529 BRD4O60885 1362 aaPredicted RBP22.44■■□□□ 1.18
PCGF3-213ENST00000620529 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
PCGF3-213ENST00000620529 NLRP13Q86W25 1043 aa22.43■■□□□ 1.18
PCGF3-213ENST00000620529 A0A1W2PP64 1363 aa22.43■■□□□ 1.18
PCGF3-213ENST00000620529 CABP1Q9NZU7 370 aa22.42■■□□□ 1.18
PCGF3-213ENST00000620529 ATP7BP35670 1465 aa22.42■■□□□ 1.18
PCGF3-213ENST00000620529 CGNL1Q0VF96 1302 aa22.42■■□□□ 1.18
PCGF3-213ENST00000620529 NUDT16Q96DE0 195 aaKnown RBP22.41■■□□□ 1.18
PCGF3-213ENST00000620529 PPIP5K1Q6PFW1 1433 aa22.4■■□□□ 1.18
PCGF3-213ENST00000620529 CD163L1Q9NR16 1453 aa22.4■■□□□ 1.18
PCGF3-213ENST00000620529 LMTK3Q96Q04 1460 aa22.39■■□□□ 1.17
PCGF3-213ENST00000620529 FAM9BQ8IZU0 186 aa22.39■■□□□ 1.17
PCGF3-213ENST00000620529 CCDC61Q9Y6R9 512 aa22.39■■□□□ 1.17
PCGF3-213ENST00000620529 ITSN1Q15811 1721 aa22.38■■□□□ 1.17
PCGF3-213ENST00000620529 HSPA2P54652 639 aa22.38■■□□□ 1.17
PCGF3-213ENST00000620529 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
PCGF3-213ENST00000620529 NSD2O96028 1365 aa22.37■■□□□ 1.17
PCGF3-213ENST00000620529 TOPAZ1Q8N9V7 1692 aa22.37■■□□□ 1.17
PCGF3-213ENST00000620529 CDC42BPGQ6DT37 1551 aa22.35■■□□□ 1.17
PCGF3-213ENST00000620529 NALCNQ8IZF0 1738 aa22.35■■□□□ 1.17
PCGF3-213ENST00000620529 KIF20BQ96Q89 1820 aa22.34■■□□□ 1.17
PCGF3-213ENST00000620529 AKAP12Q02952 1782 aa22.34■■□□□ 1.17
PCGF3-213ENST00000620529 PPP2R1AP30153 589 aa22.34■■□□□ 1.17
PCGF3-213ENST00000620529 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
PCGF3-213ENST00000620529 PRR36Q9H6K5 1346 aa22.33■■□□□ 1.17
PCGF3-213ENST00000620529 MORC1Q86VD1 984 aa22.33■■□□□ 1.17
PCGF3-213ENST00000620529 MON2Q7Z3U7 1717 aa22.32■■□□□ 1.16
PCGF3-213ENST00000620529 FMN2Q9NZ56 1722 aa22.32■■□□□ 1.16
PCGF3-213ENST00000620529 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
PCGF3-213ENST00000620529 CPSF1Q10570 1443 aaKnown RBP22.31■■□□□ 1.16
PCGF3-213ENST00000620529 RGPD8O14715 1765 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-213ENST00000620529 NKTRP30414 1462 aaKnown RBP22.3■■□□□ 1.16
PCGF3-213ENST00000620529 PNISRQ8TF01 805 aaKnown RBP22.3■■□□□ 1.16
PCGF3-213ENST00000620529 STRCQ7RTU9 1775 aa22.29■■□□□ 1.16
PCGF3-213ENST00000620529 ANKARQ7Z5J8 1434 aa22.29■■□□□ 1.16
PCGF3-213ENST00000620529 EDC4Q6P2E9 1401 aaKnown RBP22.29■■□□□ 1.16
PCGF3-213ENST00000620529 ADGRL3Q9HAR2 1447 aa22.29■■□□□ 1.16
PCGF3-213ENST00000620529 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
PCGF3-213ENST00000620529 ZNF692Q9BU19 519 aaPredicted RBP22.28■■□□□ 1.16
PCGF3-213ENST00000620529 C14orf37Q86TY3 774 aa22.27■■□□□ 1.16
PCGF3-213ENST00000620529 PLEKHG3A1L390 1219 aa22.26■■□□□ 1.15
PCGF3-213ENST00000620529 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
PCGF3-213ENST00000620529 FYB1O15117 783 aa22.24■■□□□ 1.15
PCGF3-213ENST00000620529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.15
PCGF3-213ENST00000620529 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
PCGF3-213ENST00000620529 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
PCGF3-213ENST00000620529 TNNT2P45379 298 aaPredicted RBP22.24■■□□□ 1.15
PCGF3-213ENST00000620529 ACEP12821 1306 aa22.23■■□□□ 1.15
PCGF3-213ENST00000620529 STRCP1A6NGW2 1772 aa22.22■■□□□ 1.15
PCGF3-213ENST00000620529 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
PCGF3-213ENST00000620529 PMFBP1Q8TBY8 1022 aa22.2■■□□□ 1.14
PCGF3-213ENST00000620529 USP6P35125 1406 aa22.19■■□□□ 1.14
PCGF3-213ENST00000620529 WDR43Q15061 677 aaKnown RBP eCLIP22.19■■□□□ 1.14
PCGF3-213ENST00000620529 NGDNQ8NEJ9 315 aaKnown RBP22.19■■□□□ 1.14
PCGF3-213ENST00000620529 POLR3AO14802 1390 aaPredicted RBP22.18■■□□□ 1.14
PCGF3-213ENST00000620529 NCOA3Q9Y6Q9 1424 aa22.16■■□□□ 1.14
PCGF3-213ENST00000620529 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
PCGF3-213ENST00000620529 INSRP06213 1382 aa22.15■■□□□ 1.14
PCGF3-213ENST00000620529 NME9Q86XW9 330 aa22.15■■□□□ 1.14
PCGF3-213ENST00000620529 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms