RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 BCAR3O75815 825 aa17.01■□□□□ 0.31
SKP2-209ENST00000620197 IGHDP01880 384 aa17.01■□□□□ 0.31
SKP2-209ENST00000620197 APAF1O14727 1248 aa17.01■□□□□ 0.31
SKP2-209ENST00000620197 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
SKP2-209ENST00000620197 GSE1Q14687 1217 aa17■□□□□ 0.31
SKP2-209ENST00000620197 GLI2P10070 1586 aa17■□□□□ 0.31
SKP2-209ENST00000620197 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
SKP2-209ENST00000620197 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
SKP2-209ENST00000620197 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
SKP2-209ENST00000620197 TULP4Q9NRJ4 1543 aa16.98■□□□□ 0.31
SKP2-209ENST00000620197 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
SKP2-209ENST00000620197 CFAP70Q5T0N1 1121 aa16.97■□□□□ 0.31
SKP2-209ENST00000620197 CFAP74Q9C0B2 1584 aa16.97■□□□□ 0.31
SKP2-209ENST00000620197 AAMPQ13685 434 aa16.97■□□□□ 0.31
SKP2-209ENST00000620197 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
SKP2-209ENST00000620197 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
SKP2-209ENST00000620197 NEXMIFQ5QGS0 1516 aa16.95■□□□□ 0.3
SKP2-209ENST00000620197 NOS1P29475 1434 aa16.95■□□□□ 0.3
SKP2-209ENST00000620197 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
SKP2-209ENST00000620197 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
SKP2-209ENST00000620197 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
SKP2-209ENST00000620197 NPATQ14207 1427 aa16.94■□□□□ 0.3
SKP2-209ENST00000620197 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
SKP2-209ENST00000620197 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
SKP2-209ENST00000620197 ABCC3O15438 1527 aa16.93■□□□□ 0.3
SKP2-209ENST00000620197 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
SKP2-209ENST00000620197 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
SKP2-209ENST00000620197 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
SKP2-209ENST00000620197 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
SKP2-209ENST00000620197 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
SKP2-209ENST00000620197 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
SKP2-209ENST00000620197 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
SKP2-209ENST00000620197 SEC24BO95487 1268 aa16.9■□□□□ 0.3
SKP2-209ENST00000620197 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
SKP2-209ENST00000620197 ANTXR1Q9H6X2 564 aa16.9■□□□□ 0.3
SKP2-209ENST00000620197 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
SKP2-209ENST00000620197 NSD2O96028 1365 aa16.89■□□□□ 0.3
SKP2-209ENST00000620197 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
SKP2-209ENST00000620197 RUNDC1Q96C34 613 aa16.88■□□□□ 0.29
SKP2-209ENST00000620197 MED14O60244 1454 aa16.87■□□□□ 0.29
SKP2-209ENST00000620197 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
SKP2-209ENST00000620197 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
SKP2-209ENST00000620197 KIF3BO15066 747 aa16.87■□□□□ 0.29
SKP2-209ENST00000620197 RGS3P49796 1198 aa16.87■□□□□ 0.29
SKP2-209ENST00000620197 PANK1Q8TE04 598 aa16.86■□□□□ 0.29
SKP2-209ENST00000620197 RLBP1P12271 317 aa16.86■□□□□ 0.29
SKP2-209ENST00000620197 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
SKP2-209ENST00000620197 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
SKP2-209ENST00000620197 ANKRD36BQ8N2N9 1353 aa16.85■□□□□ 0.29
SKP2-209ENST00000620197 KIF20BQ96Q89 1820 aa16.85■□□□□ 0.29
SKP2-209ENST00000620197 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
SKP2-209ENST00000620197 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
SKP2-209ENST00000620197 ZFYVE9O95405 1425 aa16.83■□□□□ 0.29
SKP2-209ENST00000620197 CD109Q6YHK3 1445 aa16.83■□□□□ 0.29
SKP2-209ENST00000620197 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.28
SKP2-209ENST00000620197 COG6Q9Y2V7 657 aa16.83■□□□□ 0.28
SKP2-209ENST00000620197 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
SKP2-209ENST00000620197 CFAP65Q6ZU64 1925 aaKnown RBP16.83■□□□□ 0.28
SKP2-209ENST00000620197 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
SKP2-209ENST00000620197 PMFBP1Q8TBY8 1022 aa16.81■□□□□ 0.28
SKP2-209ENST00000620197 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
SKP2-209ENST00000620197 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
SKP2-209ENST00000620197 TMEM131LA2VDJ0 1609 aa16.8■□□□□ 0.28
SKP2-209ENST00000620197 PTPRMP28827 1452 aa16.8■□□□□ 0.28
SKP2-209ENST00000620197 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
SKP2-209ENST00000620197 TNNQ9UQP3 1299 aa16.8■□□□□ 0.28
SKP2-209ENST00000620197 DIP2CQ9Y2E4 1556 aa16.79■□□□□ 0.28
SKP2-209ENST00000620197 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
SKP2-209ENST00000620197 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
SKP2-209ENST00000620197 CT47B1P0C2W7 299 aaPredicted RBP16.79■□□□□ 0.28
SKP2-209ENST00000620197 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
SKP2-209ENST00000620197 NCOA3Q9Y6Q9 1424 aa16.78■□□□□ 0.28
SKP2-209ENST00000620197 MORC1Q86VD1 984 aa16.78■□□□□ 0.28
SKP2-209ENST00000620197 PREX1Q8TCU6 1659 aa16.77■□□□□ 0.28
SKP2-209ENST00000620197 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.27
SKP2-209ENST00000620197 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
SKP2-209ENST00000620197 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
SKP2-209ENST00000620197 PDZRN3Q9UPQ7 1066 aa16.76■□□□□ 0.27
SKP2-209ENST00000620197 MTHFSP49914 203 aa16.75■□□□□ 0.27
SKP2-209ENST00000620197 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
SKP2-209ENST00000620197 HDAC1Q13547 482 aaPredicted RBP16.74■□□□□ 0.27
SKP2-209ENST00000620197 PPIP5K1Q6PFW1 1433 aa16.73■□□□□ 0.27
SKP2-209ENST00000620197 TBC1D2Q9BYX2 928 aa16.73■□□□□ 0.27
SKP2-209ENST00000620197 IL16Q14005 1332 aa16.72■□□□□ 0.27
SKP2-209ENST00000620197 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
SKP2-209ENST00000620197 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
SKP2-209ENST00000620197 BECN1Q14457 450 aa16.71■□□□□ 0.27
SKP2-209ENST00000620197 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
SKP2-209ENST00000620197 MYH16Q9H6N6 1097 aa16.71■□□□□ 0.27
SKP2-209ENST00000620197 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
SKP2-209ENST00000620197 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
SKP2-209ENST00000620197 DDIT3P35638 169 aa16.71■□□□□ 0.27
SKP2-209ENST00000620197 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.26
SKP2-209ENST00000620197 POGKQ9P215 609 aa16.71■□□□□ 0.26
SKP2-209ENST00000620197 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
SKP2-209ENST00000620197 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
SKP2-209ENST00000620197 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
SKP2-209ENST00000620197 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
SKP2-209ENST00000620197 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
SKP2-209ENST00000620197 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms