RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 MORN1Q5T089 497 aa13.66□□□□□ -0.22
CBWD1-228ENST00000619157 AAASQ9NRG9 546 aa13.66□□□□□ -0.22
CBWD1-228ENST00000619157 FCF1Q9Y324 198 aaKnown RBP13.66□□□□□ -0.22
CBWD1-228ENST00000619157 TESPA1A2RU30 521 aaPredicted RBP13.64□□□□□ -0.23
CBWD1-228ENST00000619157 GNPATO15228 680 aa13.64□□□□□ -0.23
CBWD1-228ENST00000619157 PRDM9Q9NQV7 894 aa13.64□□□□□ -0.23
CBWD1-228ENST00000619157 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
CBWD1-228ENST00000619157 GPR37O15354 613 aa13.62□□□□□ -0.23
CBWD1-228ENST00000619157 THAP11Q96EK4 314 aa13.62□□□□□ -0.23
CBWD1-228ENST00000619157 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
CBWD1-228ENST00000619157 FAM160A2Q8N612 972 aaPredicted RBP13.61□□□□□ -0.23
CBWD1-228ENST00000619157 SLC27A5Q9Y2P5 690 aa13.61□□□□□ -0.23
CBWD1-228ENST00000619157 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
CBWD1-228ENST00000619157 PHOX2BQ99453 314 aa13.59□□□□□ -0.23
CBWD1-228ENST00000619157 DACH1Q9UI36 760 aa13.59□□□□□ -0.23
CBWD1-228ENST00000619157 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
CBWD1-228ENST00000619157 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
CBWD1-228ENST00000619157 RPIAP49247 311 aa13.58□□□□□ -0.24
CBWD1-228ENST00000619157 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
CBWD1-228ENST00000619157 WDR62O43379 1518 aa13.58□□□□□ -0.24
CBWD1-228ENST00000619157 SMYD5Q6GMV2 418 aa13.56□□□□□ -0.24
CBWD1-228ENST00000619157 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
CBWD1-228ENST00000619157 GCGRP47871 477 aa13.55□□□□□ -0.24
CBWD1-228ENST00000619157 CYP4X1Q8N118 509 aa13.55□□□□□ -0.24
CBWD1-228ENST00000619157 TOR4AQ9NXH8 423 aa13.55□□□□□ -0.24
CBWD1-228ENST00000619157 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
CBWD1-228ENST00000619157 RNF19BQ6ZMZ0 732 aa13.54□□□□□ -0.24
CBWD1-228ENST00000619157 URB2Q14146 1524 aaKnown RBP13.53□□□□□ -0.24
CBWD1-228ENST00000619157 SULF1Q8IWU6 871 aa13.52□□□□□ -0.25
CBWD1-228ENST00000619157 PRDM2Q13029 1718 aa13.51□□□□□ -0.25
CBWD1-228ENST00000619157 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
CBWD1-228ENST00000619157 BRICD5Q6PL45 260 aa13.51□□□□□ -0.25
CBWD1-228ENST00000619157 TREML4Q6UXN2 200 aa13.5□□□□□ -0.25
CBWD1-228ENST00000619157 GMPR2Q9P2T1 348 aaKnown RBP13.5□□□□□ -0.25
CBWD1-228ENST00000619157 AXIN1O15169 862 aa13.49□□□□□ -0.25
CBWD1-228ENST00000619157 CRIPAKQ8N1N5 446 aa13.49□□□□□ -0.25
CBWD1-228ENST00000619157 AVPP01185 164 aa13.48□□□□□ -0.25
CBWD1-228ENST00000619157 ZBTB24O43167 697 aaPredicted RBP13.47□□□□□ -0.25
CBWD1-228ENST00000619157 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.25
CBWD1-228ENST00000619157 MSS51Q4VC12 460 aa13.46□□□□□ -0.25
CBWD1-228ENST00000619157 LCE2AQ5TA79 106 aaPredicted RBP13.46□□□□□ -0.25
CBWD1-228ENST00000619157 GPIHBP1Q8IV16 184 aa13.46□□□□□ -0.25
CBWD1-228ENST00000619157 SALL2Q9Y467 1007 aaPredicted RBP13.46□□□□□ -0.25
CBWD1-228ENST00000619157 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
CBWD1-228ENST00000619157 GRIPAP1Q4V328 841 aa13.41□□□□□ -0.26
CBWD1-228ENST00000619157 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
CBWD1-228ENST00000619157 TRIM32Q13049 653 aa13.4□□□□□ -0.26
CBWD1-228ENST00000619157 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
CBWD1-228ENST00000619157 SMPD1P17405 629 aa13.39□□□□□ -0.27
CBWD1-228ENST00000619157 WNT7AO00755 349 aa13.38□□□□□ -0.27
CBWD1-228ENST00000619157 HLA-CQ95604 372 aa13.38□□□□□ -0.27
CBWD1-228ENST00000619157 WFS1O76024 890 aa13.37□□□□□ -0.27
CBWD1-228ENST00000619157 SMCPP49901 116 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-228ENST00000619157 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
CBWD1-228ENST00000619157 Q3C1V9 767 aa13.37□□□□□ -0.27
CBWD1-228ENST00000619157 MRGPRX2Q96LB1 330 aa13.37□□□□□ -0.27
CBWD1-228ENST00000619157 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
CBWD1-228ENST00000619157 J3QL48 77 aa13.36□□□□□ -0.27
CBWD1-228ENST00000619157 CD46P15529 392 aa13.36□□□□□ -0.27
CBWD1-228ENST00000619157 SNIP1Q8TAD8 396 aaKnown RBP13.36□□□□□ -0.27
CBWD1-228ENST00000619157 MMP16P51512 607 aa13.35□□□□□ -0.27
CBWD1-228ENST00000619157 KDM4AO75164 1064 aa13.33□□□□□ -0.28
CBWD1-228ENST00000619157 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.28
CBWD1-228ENST00000619157 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.28
CBWD1-228ENST00000619157 ATP13A2Q9NQ11 1180 aa13.33□□□□□ -0.28
CBWD1-228ENST00000619157 ZNF608Q9ULD9 1512 aaPredicted RBP13.33□□□□□ -0.28
CBWD1-228ENST00000619157 DXOO77932 396 aaKnown RBP13.31□□□□□ -0.28
CBWD1-228ENST00000619157 SNRPBP14678 240 aaKnown RBP13.31□□□□□ -0.28
CBWD1-228ENST00000619157 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
CBWD1-228ENST00000619157 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
CBWD1-228ENST00000619157 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
CBWD1-228ENST00000619157 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
CBWD1-228ENST00000619157 CUX1P39880 1505 aa13.3□□□□□ -0.28
CBWD1-228ENST00000619157 NFX1Q12986 1120 aaKnown RBP13.3□□□□□ -0.28
CBWD1-228ENST00000619157 HPS1Q92902 700 aa13.3□□□□□ -0.28
CBWD1-228ENST00000619157 GUCA2AQ02747 115 aa13.29□□□□□ -0.28
CBWD1-228ENST00000619157 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
CBWD1-228ENST00000619157 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
CBWD1-228ENST00000619157 SKOR1P84550 965 aa13.26□□□□□ -0.29
CBWD1-228ENST00000619157 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
CBWD1-228ENST00000619157 HOXA2O43364 376 aa13.25□□□□□ -0.29
CBWD1-228ENST00000619157 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
CBWD1-228ENST00000619157 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
CBWD1-228ENST00000619157 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
CBWD1-228ENST00000619157 LCE2CQ5TA81 110 aa13.24□□□□□ -0.29
CBWD1-228ENST00000619157 SYMPKQ92797 1274 aaKnown RBP13.24□□□□□ -0.29
CBWD1-228ENST00000619157 REPIN1Q9BWE0 567 aaKnown RBP13.24□□□□□ -0.29
CBWD1-228ENST00000619157 IRF6O14896 467 aa13.23□□□□□ -0.29
CBWD1-228ENST00000619157 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
CBWD1-228ENST00000619157 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
CBWD1-228ENST00000619157 USP46P62068 366 aa13.22□□□□□ -0.29
CBWD1-228ENST00000619157 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.29
CBWD1-228ENST00000619157 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
CBWD1-228ENST00000619157 SOGA1O94964 1423 aa13.2□□□□□ -0.3
CBWD1-228ENST00000619157 ALDH1A1P00352 501 aa13.19□□□□□ -0.3
CBWD1-228ENST00000619157 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
CBWD1-228ENST00000619157 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
CBWD1-228ENST00000619157 TERTO14746 1132 aaKnown RBP13.18□□□□□ -0.3
CBWD1-228ENST00000619157 JUNDP17535 347 aa13.18□□□□□ -0.3
CBWD1-228ENST00000619157 WNT7BP56706 349 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms