RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 EVC2Q86UK5 1308 aa38.07■■■■□ 3.68
BRF1-221ENST00000619151 YTHDC1Q96MU7 727 aaKnown RBP38.07■■■■□ 3.68
BRF1-221ENST00000619151 SIRT1Q96EB6 747 aa38.06■■■■□ 3.68
BRF1-221ENST00000619151 PANK3Q9H999 370 aa38.06■■■■□ 3.68
BRF1-221ENST00000619151 POGKQ9P215 609 aa38.06■■■■□ 3.68
BRF1-221ENST00000619151 KNDC1Q76NI1 1749 aa38.05■■■■□ 3.68
BRF1-221ENST00000619151 XRN1Q8IZH2 1706 aaKnown RBP38.05■■■■□ 3.68
BRF1-221ENST00000619151 NWD1Q149M9 1564 aa38.04■■■■□ 3.68
BRF1-221ENST00000619151 CENPBP07199 599 aaPredicted RBP38.04■■■■□ 3.68
BRF1-221ENST00000619151 PRAM1Q96QH2 718 aa38.02■■■■□ 3.68
BRF1-221ENST00000619151 PER1O15534 1290 aaPredicted RBP38■■■■□ 3.67
BRF1-221ENST00000619151 TULP4Q9NRJ4 1543 aa38■■■■□ 3.67
BRF1-221ENST00000619151 PTCH1Q13635 1447 aa37.99■■■■□ 3.67
BRF1-221ENST00000619151 CPS1P31327 1500 aa37.99■■■■□ 3.67
BRF1-221ENST00000619151 RALBP1Q15311 655 aa37.98■■■■□ 3.67
BRF1-221ENST00000619151 FAM135BQ49AJ0 1406 aa37.98■■■■□ 3.67
BRF1-221ENST00000619151 ZNF335Q9H4Z2 1342 aaPredicted RBP37.97■■■■□ 3.67
BRF1-221ENST00000619151 ROBO2Q9HCK4 1378 aa37.96■■■■□ 3.67
BRF1-221ENST00000619151 NKTRP30414 1462 aaKnown RBP37.96■■■■□ 3.67
BRF1-221ENST00000619151 STRCP1A6NGW2 1772 aa37.94■■■■□ 3.66
BRF1-221ENST00000619151 SAFB2Q14151 953 aaKnown RBP eCLIP37.94■■■■□ 3.66
BRF1-221ENST00000619151 KNSTRNQ9Y448 316 aa37.92■■■■□ 3.66
BRF1-221ENST00000619151 WAPLQ7Z5K2 1190 aa37.89■■■■□ 3.66
BRF1-221ENST00000619151 NINLQ9Y2I6 1382 aa37.89■■■■□ 3.66
BRF1-221ENST00000619151 MINK1Q8N4C8 1332 aaPredicted RBP37.88■■■■□ 3.66
BRF1-221ENST00000619151 ATAD2Q6PL18 1390 aa37.86■■■■□ 3.65
BRF1-221ENST00000619151 PARD3Q8TEW0 1356 aa37.86■■■■□ 3.65
BRF1-221ENST00000619151 PLEKHH1Q9ULM0 1364 aa37.86■■■■□ 3.65
BRF1-221ENST00000619151 CNGB1Q14028 1251 aaPredicted RBP37.85■■■■□ 3.65
BRF1-221ENST00000619151 PROSER2Q86WR7 435 aaPredicted RBP37.85■■■■□ 3.65
BRF1-221ENST00000619151 MYBBP1AQ9BQG0 1328 aaKnown RBP37.84■■■■□ 3.65
BRF1-221ENST00000619151 MRS2Q9HD23 443 aa37.84■■■■□ 3.65
BRF1-221ENST00000619151 NPC1L1Q9UHC9 1359 aa37.83■■■■□ 3.65
BRF1-221ENST00000619151 SRPK2P78362 688 aaKnown RBP37.82■■■■□ 3.65
BRF1-221ENST00000619151 TMC1Q8TDI8 760 aa37.82■■■■□ 3.65
BRF1-221ENST00000619151 LTBP4Q8N2S1 1624 aa37.82■■■■□ 3.64
BRF1-221ENST00000619151 NCOA3Q9Y6Q9 1424 aa37.81■■■■□ 3.64
BRF1-221ENST00000619151 CABP2Q9NPB3 220 aa37.8■■■■□ 3.64
BRF1-221ENST00000619151 LRRC7Q96NW7 1537 aa37.79■■■■□ 3.64
BRF1-221ENST00000619151 CC2D1BQ5T0F9 858 aaKnown RBP37.77■■■■□ 3.64
BRF1-221ENST00000619151 TMEM94Q12767 1356 aa37.76■■■■□ 3.64
BRF1-221ENST00000619151 AMER1Q5JTC6 1135 aaPredicted RBP37.75■■■■□ 3.63
BRF1-221ENST00000619151 CDK19Q9BWU1 502 aa37.75■■■■□ 3.63
BRF1-221ENST00000619151 BRD4O60885 1362 aaPredicted RBP37.75■■■■□ 3.63
BRF1-221ENST00000619151 SLC12A5Q9H2X9 1139 aa37.74■■■■□ 3.63
BRF1-221ENST00000619151 ANKRD36BQ8N2N9 1353 aa37.74■■■■□ 3.63
BRF1-221ENST00000619151 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.73■■■■□ 3.63
BRF1-221ENST00000619151 RBM33Q96EV2 1170 aaKnown RBP37.72■■■■□ 3.63
BRF1-221ENST00000619151 CCDC184Q52MB2 194 aa37.71■■■■□ 3.63
BRF1-221ENST00000619151 NLRP13Q86W25 1043 aa37.71■■■■□ 3.63
BRF1-221ENST00000619151 ADGRL3Q9HAR2 1447 aa37.69■■■■□ 3.62
BRF1-221ENST00000619151 USP32Q8NFA0 1604 aa37.69■■■■□ 3.62
BRF1-221ENST00000619151 ADGRB2O60241 1585 aa37.69■■■■□ 3.62
BRF1-221ENST00000619151 NSD3Q9BZ95 1437 aa37.68■■■■□ 3.62
BRF1-221ENST00000619151 WASLO00401 505 aaPredicted RBP37.67■■■■□ 3.62
BRF1-221ENST00000619151 CARD14Q9BXL6 1004 aa37.67■■■■□ 3.62
BRF1-221ENST00000619151 XIRP1Q702N8 1843 aaKnown RBP37.66■■■■□ 3.62
BRF1-221ENST00000619151 C19orf44Q9H6X5 657 aa37.66■■■■□ 3.62
BRF1-221ENST00000619151 C14orf37Q86TY3 774 aa37.63■■■■□ 3.61
BRF1-221ENST00000619151 TERF2IPQ9NYB0 399 aa37.63■■■■□ 3.61
BRF1-221ENST00000619151 NALCNQ8IZF0 1738 aa37.63■■■■□ 3.61
BRF1-221ENST00000619151 CGNL1Q0VF96 1302 aa37.59■■■■□ 3.61
BRF1-221ENST00000619151 DCCP43146 1447 aa37.58■■■■□ 3.61
BRF1-221ENST00000619151 ATP7BP35670 1465 aa37.57■■■■□ 3.61
BRF1-221ENST00000619151 HDGFL2Q7Z4V5 671 aaPredicted RBP37.57■■■■□ 3.61
BRF1-221ENST00000619151 FAM9BQ8IZU0 186 aa37.57■■■■□ 3.61
BRF1-221ENST00000619151 CDC42BPGQ6DT37 1551 aa37.57■■■■□ 3.6
BRF1-221ENST00000619151 A0A1W2PP64 1363 aa37.57■■■■□ 3.6
BRF1-221ENST00000619151 NSD2O96028 1365 aa37.57■■■■□ 3.6
BRF1-221ENST00000619151 MSH6P52701 1360 aa37.57■■■■□ 3.6
BRF1-221ENST00000619151 CD163L1Q9NR16 1453 aa37.51■■■■□ 3.59
BRF1-221ENST00000619151 CADPS2Q86UW7 1296 aa37.51■■■■□ 3.59
BRF1-221ENST00000619151 CABP1Q9NZU7 370 aa37.51■■■■□ 3.59
BRF1-221ENST00000619151 PPP2R1AP30153 589 aa37.5■■■■□ 3.59
BRF1-221ENST00000619151 PNISRQ8TF01 805 aaKnown RBP37.5■■■■□ 3.59
BRF1-221ENST00000619151 ATF3P18847 181 aa37.49■■■■□ 3.59
BRF1-221ENST00000619151 NUDT16Q96DE0 195 aaKnown RBP37.49■■■■□ 3.59
BRF1-221ENST00000619151 IQSEC2Q5JU85 1478 aa37.49■■■■□ 3.59
BRF1-221ENST00000619151 PPIP5K1Q6PFW1 1433 aa37.49■■■■□ 3.59
BRF1-221ENST00000619151 CCDC61Q9Y6R9 512 aa37.47■■■■□ 3.59
BRF1-221ENST00000619151 HNRNPUQ00839 825 aaKnown RBP eCLIP37.46■■■■□ 3.59
BRF1-221ENST00000619151 CERKQ8TCT0 537 aa37.46■■■■□ 3.59
BRF1-221ENST00000619151 FMN2Q9NZ56 1722 aa37.45■■■■□ 3.59
BRF1-221ENST00000619151 MORC1Q86VD1 984 aa37.44■■■■□ 3.58
BRF1-221ENST00000619151 ANKARQ7Z5J8 1434 aa37.43■■■■□ 3.58
BRF1-221ENST00000619151 PRR36Q9H6K5 1346 aa37.41■■■■□ 3.58
BRF1-221ENST00000619151 MST1RQ04912 1400 aa37.4■■■■□ 3.58
BRF1-221ENST00000619151 TOPAZ1Q8N9V7 1692 aa37.39■■■■□ 3.58
BRF1-221ENST00000619151 CPSF1Q10570 1443 aaKnown RBP37.39■■■■□ 3.58
BRF1-221ENST00000619151 NUTM2FA1L443 756 aa37.37■■■■□ 3.57
BRF1-221ENST00000619151 ITSN1Q15811 1721 aa37.36■■■■□ 3.57
BRF1-221ENST00000619151 C1orf167Q5SNV9 1468 aa37.36■■■■□ 3.57
BRF1-221ENST00000619151 ANKRD26Q9UPS8 1709 aa37.36■■■■□ 3.57
BRF1-221ENST00000619151 SLAIN2Q9P270 581 aa37.35■■■■□ 3.57
BRF1-221ENST00000619151 INSRP06213 1382 aa37.34■■■■□ 3.57
BRF1-221ENST00000619151 EDC4Q6P2E9 1401 aaKnown RBP37.34■■■■□ 3.57
BRF1-221ENST00000619151 KIF20BQ96Q89 1820 aa37.34■■■■□ 3.57
BRF1-221ENST00000619151 ZNF692Q9BU19 519 aaPredicted RBP37.33■■■■□ 3.57
BRF1-221ENST00000619151 AKAP12Q02952 1782 aa37.32■■■■□ 3.57
BRF1-221ENST00000619151 MON2Q7Z3U7 1717 aa37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms