RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
PCDHGB3-202ENST00000618934 DEKP35659 375 aaKnown RBP25.13■■□□□ 1.61
PCDHGB3-202ENST00000618934 NEUROD2Q15784 382 aa25.13■■□□□ 1.61
PCDHGB3-202ENST00000618934 CFAP74Q9C0B2 1584 aa25.12■■□□□ 1.61
PCDHGB3-202ENST00000618934 RPGRIP1LQ68CZ1 1315 aa25.11■■□□□ 1.61
PCDHGB3-202ENST00000618934 CAMSAP1Q5T5Y3 1602 aa25.11■■□□□ 1.61
PCDHGB3-202ENST00000618934 SAFB2Q14151 953 aaKnown RBP eCLIP25.09■■□□□ 1.61
PCDHGB3-202ENST00000618934 MTHFSP49914 203 aa25.08■■□□□ 1.61
PCDHGB3-202ENST00000618934 GLI2P10070 1586 aa25.08■■□□□ 1.61
PCDHGB3-202ENST00000618934 IDI1Q13907 227 aa25.06■■□□□ 1.6
PCDHGB3-202ENST00000618934 CABP2Q9NPB3 220 aa25.06■■□□□ 1.6
PCDHGB3-202ENST00000618934 TULP4Q9NRJ4 1543 aa25.06■■□□□ 1.6
PCDHGB3-202ENST00000618934 TCP11L2Q8N4U5 519 aa25.05■■□□□ 1.6
PCDHGB3-202ENST00000618934 NEXMIFQ5QGS0 1516 aa25.05■■□□□ 1.6
PCDHGB3-202ENST00000618934 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
PCDHGB3-202ENST00000618934 LAS1LQ9Y4W2 734 aaKnown RBP25.04■■□□□ 1.6
PCDHGB3-202ENST00000618934 RUNDC1Q96C34 613 aa25.04■■□□□ 1.6
PCDHGB3-202ENST00000618934 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 RGS3P49796 1198 aa25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 IGHDP01880 384 aa25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 NGEFQ8N5V2 710 aa25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 PANK1Q8TE04 598 aa25.03■■□□□ 1.6
PCDHGB3-202ENST00000618934 CGNL1Q0VF96 1302 aa25.02■■□□□ 1.6
PCDHGB3-202ENST00000618934 C8orf34Q49A92 452 aa25.02■■□□□ 1.6
PCDHGB3-202ENST00000618934 STK26Q9P289 416 aa25.02■■□□□ 1.6
PCDHGB3-202ENST00000618934 EVC2Q86UK5 1308 aa25.01■■□□□ 1.59
PCDHGB3-202ENST00000618934 IQSEC2Q5JU85 1478 aa25■■□□□ 1.59
PCDHGB3-202ENST00000618934 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
PCDHGB3-202ENST00000618934 NEO1Q92859 1461 aa24.99■■□□□ 1.59
PCDHGB3-202ENST00000618934 COG6Q9Y2V7 657 aa24.99■■□□□ 1.59
PCDHGB3-202ENST00000618934 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
PCDHGB3-202ENST00000618934 USP32Q8NFA0 1604 aa24.98■■□□□ 1.59
PCDHGB3-202ENST00000618934 TNNQ9UQP3 1299 aa24.98■■□□□ 1.59
PCDHGB3-202ENST00000618934 MYO5BQ9ULV0 1848 aa24.97■■□□□ 1.59
PCDHGB3-202ENST00000618934 ANKRD36BQ8N2N9 1353 aa24.97■■□□□ 1.59
PCDHGB3-202ENST00000618934 FAM161AQ3B820 660 aa24.96■■□□□ 1.59
PCDHGB3-202ENST00000618934 FRAT1Q92837 279 aaPredicted RBP24.96■■□□□ 1.59
PCDHGB3-202ENST00000618934 SLC4A3P48751 1232 aa24.96■■□□□ 1.59
PCDHGB3-202ENST00000618934 PDE3AQ14432 1141 aa24.95■■□□□ 1.59
PCDHGB3-202ENST00000618934 RARSP54136 660 aaKnown RBP24.95■■□□□ 1.58
PCDHGB3-202ENST00000618934 RICTORQ6R327 1708 aa24.94■■□□□ 1.58
PCDHGB3-202ENST00000618934 BCL2L13Q9BXK5 485 aa24.94■■□□□ 1.58
PCDHGB3-202ENST00000618934 CANXP27824 592 aaKnown RBP24.93■■□□□ 1.58
PCDHGB3-202ENST00000618934 RTL5Q5HYW3 569 aaPredicted RBP24.93■■□□□ 1.58
PCDHGB3-202ENST00000618934 PUS7Q96PZ0 661 aaKnown RBP24.93■■□□□ 1.58
PCDHGB3-202ENST00000618934 ARHGAP31Q2M1Z3 1444 aa24.92■■□□□ 1.58
PCDHGB3-202ENST00000618934 CFAP53Q96M91 514 aa24.92■■□□□ 1.58
PCDHGB3-202ENST00000618934 U2AF1L5P0DN76 240 aaPredicted RBP24.92■■□□□ 1.58
PCDHGB3-202ENST00000618934 RLBP1P12271 317 aa24.92■■□□□ 1.58
PCDHGB3-202ENST00000618934 U2AF1Q01081 240 aaKnown RBP eCLIP24.92■■□□□ 1.58
PCDHGB3-202ENST00000618934 A0A1W2PP64 1363 aa24.91■■□□□ 1.58
PCDHGB3-202ENST00000618934 FBXO31Q5XUX0 539 aaPredicted RBP24.91■■□□□ 1.58
PCDHGB3-202ENST00000618934 WDR63Q8IWG1 891 aa24.91■■□□□ 1.58
PCDHGB3-202ENST00000618934 CLUAP1Q96AJ1 413 aa24.91■■□□□ 1.58
PCDHGB3-202ENST00000618934 SRPK2P78362 688 aaKnown RBP24.9■■□□□ 1.58
PCDHGB3-202ENST00000618934 GGNBP2Q9H3C7 697 aa24.9■■□□□ 1.58
PCDHGB3-202ENST00000618934 MINK1Q8N4C8 1332 aaPredicted RBP24.89■■□□□ 1.58
PCDHGB3-202ENST00000618934 SLC52A1Q9NWF4 448 aa24.88■■□□□ 1.57
PCDHGB3-202ENST00000618934 NEFMP07197 916 aa24.87■■□□□ 1.57
PCDHGB3-202ENST00000618934 DDRGK1Q96HY6 314 aa24.87■■□□□ 1.57
PCDHGB3-202ENST00000618934 CCDC27Q2M243 656 aa24.86■■□□□ 1.57
PCDHGB3-202ENST00000618934 PRAM1Q96QH2 718 aa24.86■■□□□ 1.57
PCDHGB3-202ENST00000618934 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
PCDHGB3-202ENST00000618934 TMEM131LA2VDJ0 1609 aa24.85■■□□□ 1.57
PCDHGB3-202ENST00000618934 NSD2O96028 1365 aa24.85■■□□□ 1.57
PCDHGB3-202ENST00000618934 PTPRMP28827 1452 aa24.85■■□□□ 1.57
PCDHGB3-202ENST00000618934 PCDHB15Q9Y5E8 787 aa24.84■■□□□ 1.57
PCDHGB3-202ENST00000618934 PREX1Q8TCU6 1659 aa24.84■■□□□ 1.57
PCDHGB3-202ENST00000618934 ABCC11Q96J66 1382 aa24.84■■□□□ 1.57
PCDHGB3-202ENST00000618934 NINLQ9Y2I6 1382 aa24.83■■□□□ 1.57
PCDHGB3-202ENST00000618934 FYB1O15117 783 aa24.82■■□□□ 1.56
PCDHGB3-202ENST00000618934 U2SURPO15042 1029 aaKnown RBP24.82■■□□□ 1.56
PCDHGB3-202ENST00000618934 TSR2Q969E8 191 aaKnown RBP24.82■■□□□ 1.56
PCDHGB3-202ENST00000618934 PLEKHF1Q96S99 279 aa24.81■■□□□ 1.56
PCDHGB3-202ENST00000618934 CD163L1Q9NR16 1453 aa24.81■■□□□ 1.56
PCDHGB3-202ENST00000618934 POGKQ9P215 609 aa24.8■■□□□ 1.56
PCDHGB3-202ENST00000618934 YTHDC2Q9H6S0 1430 aaKnown RBP24.8■■□□□ 1.56
PCDHGB3-202ENST00000618934 SEC24BO95487 1268 aa24.79■■□□□ 1.56
PCDHGB3-202ENST00000618934 ADGRB2O60241 1585 aa24.79■■□□□ 1.56
PCDHGB3-202ENST00000618934 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
PCDHGB3-202ENST00000618934 MYH16Q9H6N6 1097 aa24.77■■□□□ 1.56
PCDHGB3-202ENST00000618934 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
PCDHGB3-202ENST00000618934 PPM1GO15355 546 aaPredicted RBP24.77■■□□□ 1.56
PCDHGB3-202ENST00000618934 TRIM35Q9UPQ4 493 aa24.77■■□□□ 1.56
PCDHGB3-202ENST00000618934 USP19O94966 1318 aa24.77■■□□□ 1.56
PCDHGB3-202ENST00000618934 TMPOP42166 694 aaKnown RBP24.76■■□□□ 1.55
PCDHGB3-202ENST00000618934 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
PCDHGB3-202ENST00000618934 FBLN1P23142 703 aa24.75■■□□□ 1.55
PCDHGB3-202ENST00000618934 CDK19Q9BWU1 502 aa24.75■■□□□ 1.55
PCDHGB3-202ENST00000618934 CABP1Q9NZU7 370 aa24.74■■□□□ 1.55
PCDHGB3-202ENST00000618934 TERF2IPQ9NYB0 399 aa24.74■■□□□ 1.55
PCDHGB3-202ENST00000618934 ATAD2Q6PL18 1390 aa24.73■■□□□ 1.55
PCDHGB3-202ENST00000618934 EXOSC9Q06265 439 aaKnown RBP24.73■■□□□ 1.55
PCDHGB3-202ENST00000618934 ALKQ9UM73 1620 aa24.73■■□□□ 1.55
PCDHGB3-202ENST00000618934 VIRMAQ69YN4 1812 aaKnown RBP24.72■■□□□ 1.55
PCDHGB3-202ENST00000618934 NCBP3Q53F19 620 aaKnown RBP24.72■■□□□ 1.55
PCDHGB3-202ENST00000618934 USP35Q9P2H5 1018 aa24.72■■□□□ 1.55
PCDHGB3-202ENST00000618934 WAPLQ7Z5K2 1190 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms