RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 NEUROD2Q15784 382 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 MFRPQ9BY79 579 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 ABCC3O15438 1527 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 PPARGC1BQ86YN6 1023 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 DNMT1P26358 1616 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 RGPD3A6NKT7 1758 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 RGPD4Q7Z3J3 1758 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 IQGAP1P46940 1657 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 TNIKQ9UKE5 1360 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 ZNF316A6NFI3 1004 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 OS9Q13438 667 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 SPTY2D1Q68D10 685 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 PRDM4Q9UKN5 801 aa5.47□□□□□ -1.53
UBE2D3-233ENST00000618836 ROBO1Q9Y6N7 1651 aa5.46□□□□□ -1.53
UBE2D3-233ENST00000618836 ZC3H4Q9UPT8 1303 aaKnown RBP5.46□□□□□ -1.54
UBE2D3-233ENST00000618836 PHLPP1O60346 1717 aa5.46□□□□□ -1.54
UBE2D3-233ENST00000618836 DISP1Q96F81 1524 aa5.45□□□□□ -1.54
UBE2D3-233ENST00000618836 CNTLNQ9NXG0 1405 aa5.45□□□□□ -1.54
UBE2D3-233ENST00000618836 PITPNM1O00562 1244 aa5.45□□□□□ -1.54
UBE2D3-233ENST00000618836 PRELPP51888 382 aa5.45□□□□□ -1.54
UBE2D3-233ENST00000618836 NME8Q8N427 588 aa5.45□□□□□ -1.54
UBE2D3-233ENST00000618836 BRD1O95696 1058 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 TSHZ1Q6ZSZ6 1077 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 TSPYL2Q9H2G4 693 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 RGS12O14924 1447 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 C9orf84Q5VXU9 1444 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 SHANK3Q9BYB0 1731 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 POTEHQ6S545 545 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 CCDC82Q8N4S0 544 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 GZF1Q9H116 711 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 AXDND1Q5T1B0 1012 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 HECW1Q76N89 1606 aa5.44□□□□□ -1.54
UBE2D3-233ENST00000618836 KDM5AP29375 1690 aaKnown RBP5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 LMOD2Q6P5Q4 547 aa5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 AEBP1Q8IUX7 1158 aa5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 FAM50AQ14320 339 aaKnown RBP5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 SPATA32Q96LK8 384 aa5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 AMOTL2Q9Y2J4 779 aa5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 SCAF11Q99590 1463 aaKnown RBP5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 MARF1Q9Y4F3 1742 aaKnown RBP5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 CNGB1Q14028 1251 aaPredicted RBP5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 NBPF11Q86T75 865 aa5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 REM2Q8IYK8 340 aaPredicted RBP5.43□□□□□ -1.54
UBE2D3-233ENST00000618836 HSPA2P54652 639 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 TRPC6Q9Y210 931 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 RGPD1P0DJD0 1748 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 LRP6O75581 1613 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 NCKAP5LQ9HCH0 1330 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 ANKRD13AQ8IZ07 590 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 GPBP1L1Q9HC44 474 aaPredicted RBP5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 NBPF20Q3BBV1 942 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 JPH4Q96JJ6 628 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 SLC24A3Q9HC58 644 aa5.42□□□□□ -1.54
UBE2D3-233ENST00000618836 CAMSAP2Q08AD1 1489 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 RALGAPBQ86X10 1494 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 PSEN1P49768 467 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 CEP120Q8N960 986 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 RTEL1-TNFRSF6BF6WH68 1400 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 TTC36A6NLP5 189 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 UBAP1LF5GYI3 381 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 COL22A1Q8NFW1 1626 aaPredicted RBP5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 DIP2CQ9Y2E4 1556 aa5.41□□□□□ -1.54
UBE2D3-233ENST00000618836 TOM1O60784 492 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 MYBPC2Q14324 1141 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 NBPF1Q3BBV0 1214 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 BARGINQ6ZT62 677 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 CCER1Q8TC90 406 aaPredicted RBP5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 TERF2IPQ9NYB0 399 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 ATP10AO60312 1499 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 USP32Q8NFA0 1604 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 CASZ1Q86V15 1759 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 CALD1Q05682 793 aaKnown RBP5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 RINLQ6ZS11 566 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 SDR16C5Q8N3Y7 309 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 SH3BP1Q9Y3L3 701 aa5.4□□□□□ -1.54
UBE2D3-233ENST00000618836 SUGT1Q9Y2Z0 365 aa5.4□□□□□ -1.55
UBE2D3-233ENST00000618836 TNS1Q9HBL0 1735 aaKnown RBP5.4□□□□□ -1.55
UBE2D3-233ENST00000618836 CENPJQ9HC77 1338 aaPredicted RBP5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 ERCC3P19447 782 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 YTHDC1Q96MU7 727 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 MYH16Q9H6N6 1097 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 SLC52A1Q9NWF4 448 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 PATL2C9JE40 543 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 CCDC96Q2M329 555 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 MKL1Q969V6 931 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 RPS6KL1Q9Y6S9 549 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 MAP3K1Q13233 1512 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 DISP2A7MBM2 1401 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 RRP9O43818 475 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 MCCD1P59942 119 aaPredicted RBP5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 NOL8Q76FK4 1167 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 FAM212AQ96EL1 285 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 PPME1Q9Y570 386 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 IGF1RP08069 1367 aa5.39□□□□□ -1.55
UBE2D3-233ENST00000618836 IQGAP2Q13576 1575 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 ATP7AQ04656 1500 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 TESPA1A2RU30 521 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 TPD52L2O43399 206 aaKnown RBP5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 SMARCA5O60264 1052 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms