RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 DISP3Q9P2K9 1392 aa5.88□□□□□ -1.47
SEC22B-202ENST00000618538 ERICH6BQ5W0A0 696 aa5.88□□□□□ -1.47
SEC22B-202ENST00000618538 CCDC144AA2RUR9 1427 aa5.88□□□□□ -1.47
SEC22B-202ENST00000618538 COL17A1Q9UMD9 1497 aaPredicted RBP5.87□□□□□ -1.47
SEC22B-202ENST00000618538 NUDCQ9Y266 331 aa5.87□□□□□ -1.47
SEC22B-202ENST00000618538 FANCIQ9NVI1 1328 aa5.87□□□□□ -1.47
SEC22B-202ENST00000618538 LAMC1P11047 1609 aa5.87□□□□□ -1.47
SEC22B-202ENST00000618538 LSM11P83369 360 aaKnown RBP eCLIP5.87□□□□□ -1.47
SEC22B-202ENST00000618538 FBXO3Q9UK99 471 aa5.87□□□□□ -1.47
SEC22B-202ENST00000618538 RNF17Q9BXT8 1623 aaKnown RBP5.87□□□□□ -1.47
SEC22B-202ENST00000618538 PARD3Q8TEW0 1356 aa5.87□□□□□ -1.47
SEC22B-202ENST00000618538 ZCCHC11Q5TAX3 1644 aaKnown RBP5.86□□□□□ -1.47
SEC22B-202ENST00000618538 PER1O15534 1290 aaPredicted RBP5.86□□□□□ -1.47
SEC22B-202ENST00000618538 TESK2Q96S53 571 aa5.86□□□□□ -1.47
SEC22B-202ENST00000618538 ATP10AO60312 1499 aa5.86□□□□□ -1.47
SEC22B-202ENST00000618538 ABCC1P33527 1531 aa5.86□□□□□ -1.47
SEC22B-202ENST00000618538 RGL3Q3MIN7 710 aa5.86□□□□□ -1.47
SEC22B-202ENST00000618538 GPR153Q6NV75 609 aa5.86□□□□□ -1.47
SEC22B-202ENST00000618538 MYBBP1AQ9BQG0 1328 aaKnown RBP5.86□□□□□ -1.47
SEC22B-202ENST00000618538 BRD4O60885 1362 aaPredicted RBP5.86□□□□□ -1.47
SEC22B-202ENST00000618538 TRAPPC8Q9Y2L5 1435 aa5.86□□□□□ -1.47
SEC22B-202ENST00000618538 CLASP1Q7Z460 1538 aa5.85□□□□□ -1.47
SEC22B-202ENST00000618538 DUOX2Q9NRD8 1548 aa5.85□□□□□ -1.47
SEC22B-202ENST00000618538 ANKRD13DQ6ZTN6 518 aa5.84□□□□□ -1.47
SEC22B-202ENST00000618538 TMC1Q8TDI8 760 aa5.84□□□□□ -1.47
SEC22B-202ENST00000618538 MADDQ8WXG6 1647 aa5.84□□□□□ -1.47
SEC22B-202ENST00000618538 PLCH2O75038 1416 aa5.84□□□□□ -1.47
SEC22B-202ENST00000618538 ERBINQ96RT1 1412 aa5.84□□□□□ -1.47
SEC22B-202ENST00000618538 ZFYVE16Q7Z3T8 1539 aa5.84□□□□□ -1.48
SEC22B-202ENST00000618538 DPY19L2Q6NUT2 758 aa5.83□□□□□ -1.48
SEC22B-202ENST00000618538 IQGAP1P46940 1657 aa5.83□□□□□ -1.48
SEC22B-202ENST00000618538 EIF2AK4Q9P2K8 1649 aaKnown RBP5.83□□□□□ -1.48
SEC22B-202ENST00000618538 KTN1Q86UP2 1357 aaKnown RBP5.83□□□□□ -1.48
SEC22B-202ENST00000618538 RALBP1Q15311 655 aa5.83□□□□□ -1.48
SEC22B-202ENST00000618538 RSPH4AQ5TD94 716 aa5.83□□□□□ -1.48
SEC22B-202ENST00000618538 CLTCL1P53675 1640 aa5.83□□□□□ -1.48
SEC22B-202ENST00000618538 WDR7Q9Y4E6 1490 aa5.83□□□□□ -1.48
SEC22B-202ENST00000618538 IFFO2Q5TF58 517 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 UHRF1BP1LA0JNW5 1464 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 BLMP54132 1417 aaPredicted RBP5.82□□□□□ -1.48
SEC22B-202ENST00000618538 DEPDC5O75140 1603 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 NLRP13Q86W25 1043 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 CDCA7LQ96GN5 454 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 TRPM2O94759 1503 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 SPHKAPQ2M3C7 1700 aa5.82□□□□□ -1.48
SEC22B-202ENST00000618538 MYOM1P52179 1685 aa5.81□□□□□ -1.48
SEC22B-202ENST00000618538 CC2D1BQ5T0F9 858 aaKnown RBP5.81□□□□□ -1.48
SEC22B-202ENST00000618538 SALL2Q9Y467 1007 aaPredicted RBP5.81□□□□□ -1.48
SEC22B-202ENST00000618538 MROH1Q8NDA8 1641 aa5.81□□□□□ -1.48
SEC22B-202ENST00000618538 INO80Q9ULG1 1556 aaPredicted RBP5.81□□□□□ -1.48
SEC22B-202ENST00000618538 CEP152O94986 1710 aa5.81□□□□□ -1.48
SEC22B-202ENST00000618538 RRP1P56182 461 aaKnown RBP5.8□□□□□ -1.48
SEC22B-202ENST00000618538 EXOC6Q8TAG9 804 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 PANK3Q9H999 370 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 CABP2Q9NPB3 220 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 PTPRTO14522 1441 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 VWDEQ8N2E2 1590 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 UGGT1Q9NYU2 1555 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 AFAP1Q8N556 730 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 ABCA9Q8IUA7 1624 aa5.8□□□□□ -1.48
SEC22B-202ENST00000618538 CCDC136Q96JN2 1154 aa5.79□□□□□ -1.48
SEC22B-202ENST00000618538 ZMYM4Q5VZL5 1548 aa5.79□□□□□ -1.48
SEC22B-202ENST00000618538 ARAP3Q8WWN8 1544 aa5.79□□□□□ -1.48
SEC22B-202ENST00000618538 TET3O43151 1660 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 EFCAB2Q5VUJ9 269 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 SKAP1Q86WV1 359 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 RCAN3Q9UKA8 241 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 PLEKHH1Q9ULM0 1364 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 RTEL1-TNFRSF6BF6WH68 1400 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 ATP7AQ04656 1500 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 PSDA5PKW4 1024 aaPredicted RBP5.78□□□□□ -1.48
SEC22B-202ENST00000618538 SYNMO15061 1565 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 MROH2AA6NES4 1674 aa5.78□□□□□ -1.48
SEC22B-202ENST00000618538 ABCA6Q8N139 1617 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 SCAF11Q99590 1463 aaKnown RBP5.77□□□□□ -1.49
SEC22B-202ENST00000618538 INSRP06213 1382 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 PLIN1O60240 522 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 TMF1P82094 1093 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 MICALL2Q8IY33 904 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 SCAPERQ9BY12 1400 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 SPAG9O60271 1321 aaKnown RBP5.77□□□□□ -1.49
SEC22B-202ENST00000618538 WASHC2CQ9Y4E1 1318 aa5.77□□□□□ -1.49
SEC22B-202ENST00000618538 TK2O00142 265 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 SOX12O15370 315 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 IRX2Q9BZI1 471 aaPredicted RBP5.76□□□□□ -1.49
SEC22B-202ENST00000618538 ADAMTS8Q9UP79 889 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 FANCAO15360 1455 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 IFT172Q9UG01 1749 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 PPP2R1AP30153 589 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 C20orf194Q5TEA3 1177 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 PPRC1Q5VV67 1664 aaKnown RBP5.76□□□□□ -1.49
SEC22B-202ENST00000618538 ZNF521Q96K83 1311 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 ERVK-7P63135 1459 aa5.76□□□□□ -1.49
SEC22B-202ENST00000618538 KIAA1210Q9ULL0 1709 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 MAP3K4Q9Y6R4 1608 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 KIDINS220Q9ULH0 1771 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 EFCAB6Q5THR3 1501 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 ASXL1Q8IXJ9 1541 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 PDE3BQ13370 1112 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 KLHL34Q8N239 644 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms