RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 HFM1A2PYH4 1435 aa7.31□□□□□ -1.24
SNCA-213ENST00000618500 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
SNCA-213ENST00000618500 ADGRB2O60241 1585 aa7.3□□□□□ -1.24
SNCA-213ENST00000618500 TRPC5Q9UL62 973 aaPredicted RBP7.3□□□□□ -1.24
SNCA-213ENST00000618500 THSD7AQ9UPZ6 1657 aa7.3□□□□□ -1.24
SNCA-213ENST00000618500 TECPR2O15040 1411 aa7.29□□□□□ -1.24
SNCA-213ENST00000618500 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
SNCA-213ENST00000618500 MAPK8IP2Q13387 824 aaPredicted RBP7.29□□□□□ -1.24
SNCA-213ENST00000618500 QTRT2Q9H974 415 aaKnown RBP7.29□□□□□ -1.24
SNCA-213ENST00000618500 RALGAPBQ86X10 1494 aa7.28□□□□□ -1.24
SNCA-213ENST00000618500 COL14A1Q05707 1796 aaKnown RBP7.27□□□□□ -1.25
SNCA-213ENST00000618500 RRP7BPQ9NSQ0 103 aa7.27□□□□□ -1.25
SNCA-213ENST00000618500 AMOTL2Q9Y2J4 779 aa7.27□□□□□ -1.25
SNCA-213ENST00000618500 TRPM3Q9HCF6 1732 aaPredicted RBP7.26□□□□□ -1.25
SNCA-213ENST00000618500 NUP188Q5SRE5 1749 aa7.26□□□□□ -1.25
SNCA-213ENST00000618500 LRPPRCP42704 1394 aaKnown RBP7.25□□□□□ -1.25
SNCA-213ENST00000618500 ALS2Q96Q42 1657 aa7.25□□□□□ -1.25
SNCA-213ENST00000618500 METP08581 1390 aa7.25□□□□□ -1.25
SNCA-213ENST00000618500 RNF39Q9H2S5 420 aa7.25□□□□□ -1.25
SNCA-213ENST00000618500 KANK4Q5T7N3 995 aaPredicted RBP7.24□□□□□ -1.25
SNCA-213ENST00000618500 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
SNCA-213ENST00000618500 USP21Q9UK80 565 aa7.24□□□□□ -1.25
SNCA-213ENST00000618500 C8orf37Q96NL8 207 aa7.23□□□□□ -1.25
SNCA-213ENST00000618500 PARD3Q8TEW0 1356 aa7.23□□□□□ -1.25
SNCA-213ENST00000618500 CCDC144AA2RUR9 1427 aa7.23□□□□□ -1.25
SNCA-213ENST00000618500 RRBP1Q9P2E9 1410 aaKnown RBP7.23□□□□□ -1.25
SNCA-213ENST00000618500 NUTM2BA6NNL0 878 aaPredicted RBP7.22□□□□□ -1.25
SNCA-213ENST00000618500 NUTM2EB1AL46 878 aaPredicted RBP7.22□□□□□ -1.25
SNCA-213ENST00000618500 NUTM2DQ5VT03 806 aaPredicted RBP7.22□□□□□ -1.25
SNCA-213ENST00000618500 NUTM2AQ8IVF1 878 aaPredicted RBP7.22□□□□□ -1.25
SNCA-213ENST00000618500 RBM33Q96EV2 1170 aaKnown RBP7.22□□□□□ -1.25
SNCA-213ENST00000618500 C14orf37Q86TY3 774 aa7.22□□□□□ -1.25
SNCA-213ENST00000618500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.22□□□□□ -1.25
SNCA-213ENST00000618500 RPGRIP1LQ68CZ1 1315 aa7.22□□□□□ -1.25
SNCA-213ENST00000618500 NPHP3Q7Z494 1330 aa7.22□□□□□ -1.25
SNCA-213ENST00000618500 CASZ1Q86V15 1759 aa7.21□□□□□ -1.25
SNCA-213ENST00000618500 GJD4Q96KN9 370 aaPredicted RBP7.21□□□□□ -1.25
SNCA-213ENST00000618500 SBNO1A3KN83 1393 aa7.21□□□□□ -1.26
SNCA-213ENST00000618500 DLC1Q96QB1 1528 aa7.21□□□□□ -1.26
SNCA-213ENST00000618500 EHMT2Q96KQ7 1210 aa7.21□□□□□ -1.26
SNCA-213ENST00000618500 BCANQ96GW7 911 aa7.2□□□□□ -1.26
SNCA-213ENST00000618500 WNK3Q9BYP7 1800 aa7.2□□□□□ -1.26
SNCA-213ENST00000618500 ITSN1Q15811 1721 aa7.2□□□□□ -1.26
SNCA-213ENST00000618500 NRXN1Q9ULB1 1477 aa7.2□□□□□ -1.26
SNCA-213ENST00000618500 TNS3Q68CZ2 1445 aa7.2□□□□□ -1.26
SNCA-213ENST00000618500 ROBO2Q9HCK4 1378 aa7.2□□□□□ -1.26
SNCA-213ENST00000618500 PHRF1Q9P1Y6 1649 aaKnown RBP7.2□□□□□ -1.26
SNCA-213ENST00000618500 KCNA4P22459 653 aa7.19□□□□□ -1.26
SNCA-213ENST00000618500 VPS72Q15906 364 aa7.19□□□□□ -1.26
SNCA-213ENST00000618500 PARP4Q9UKK3 1724 aaKnown RBP7.19□□□□□ -1.26
SNCA-213ENST00000618500 ANKARQ7Z5J8 1434 aa7.19□□□□□ -1.26
SNCA-213ENST00000618500 COL24A1Q17RW2 1714 aa7.19□□□□□ -1.26
SNCA-213ENST00000618500 UNC5CLQ8IV45 518 aa7.19□□□□□ -1.26
SNCA-213ENST00000618500 NAIPQ13075 1403 aa7.18□□□□□ -1.26
SNCA-213ENST00000618500 SIRT1Q96EB6 747 aa7.18□□□□□ -1.26
SNCA-213ENST00000618500 RGPD8O14715 1765 aaPredicted RBP7.18□□□□□ -1.26
SNCA-213ENST00000618500 PEAK1Q9H792 1746 aa7.17□□□□□ -1.26
SNCA-213ENST00000618500 ARHGEF10O15013 1369 aa7.17□□□□□ -1.26
SNCA-213ENST00000618500 SPATA31A3Q5VYP0 1347 aa7.17□□□□□ -1.26
SNCA-213ENST00000618500 QSER1Q2KHR3 1735 aa7.17□□□□□ -1.26
SNCA-213ENST00000618500 NINLQ9Y2I6 1382 aa7.16□□□□□ -1.26
SNCA-213ENST00000618500 TOPAZ1Q8N9V7 1692 aa7.16□□□□□ -1.26
SNCA-213ENST00000618500 ABCC11Q96J66 1382 aa7.16□□□□□ -1.26
SNCA-213ENST00000618500 C1QBPQ07021 282 aaKnown RBP7.16□□□□□ -1.26
SNCA-213ENST00000618500 HRCP23327 699 aa7.15□□□□□ -1.27
SNCA-213ENST00000618500 NUP155O75694 1391 aa7.15□□□□□ -1.27
SNCA-213ENST00000618500 LMO7Q8WWI1 1683 aa7.15□□□□□ -1.27
SNCA-213ENST00000618500 PIK3C2GO75747 1445 aa7.15□□□□□ -1.27
SNCA-213ENST00000618500 VGFO15240 615 aaPredicted RBP7.14□□□□□ -1.27
SNCA-213ENST00000618500 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
SNCA-213ENST00000618500 ADAMTS2O95450 1211 aa7.14□□□□□ -1.27
SNCA-213ENST00000618500 SBF2Q86WG5 1849 aa7.13□□□□□ -1.27
SNCA-213ENST00000618500 ATP7BP35670 1465 aa7.13□□□□□ -1.27
SNCA-213ENST00000618500 BAG6P46379 1132 aa7.13□□□□□ -1.27
SNCA-213ENST00000618500 EIF3AQ14152 1382 aaKnown RBP7.12□□□□□ -1.27
SNCA-213ENST00000618500 SPATA31E1Q6ZUB1 1445 aa7.12□□□□□ -1.27
SNCA-213ENST00000618500 ORAI2Q96SN7 254 aa7.12□□□□□ -1.27
SNCA-213ENST00000618500 ANKRD30BQ9BXX2 1392 aa7.12□□□□□ -1.27
SNCA-213ENST00000618500 POTEHQ6S545 545 aa7.12□□□□□ -1.27
SNCA-213ENST00000618500 CHD4Q14839 1912 aa7.12□□□□□ -1.27
SNCA-213ENST00000618500 TULP4Q9NRJ4 1543 aa7.11□□□□□ -1.27
SNCA-213ENST00000618500 C11orf95C9JLR9 678 aaPredicted RBP7.11□□□□□ -1.27
SNCA-213ENST00000618500 KRT27Q7Z3Y8 459 aa7.11□□□□□ -1.27
SNCA-213ENST00000618500 DDX17Q92841 729 aaKnown RBP7.11□□□□□ -1.27
SNCA-213ENST00000618500 CHIC2Q9UKJ5 165 aa7.11□□□□□ -1.27
SNCA-213ENST00000618500 NRKQ7Z2Y5 1582 aa7.11□□□□□ -1.27
SNCA-213ENST00000618500 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
SNCA-213ENST00000618500 TRPM1Q7Z4N2 1603 aa7.11□□□□□ -1.27
SNCA-213ENST00000618500 BCL9O00512 1426 aa7.1□□□□□ -1.27
SNCA-213ENST00000618500 CHGAP10645 457 aaKnown RBP7.1□□□□□ -1.27
SNCA-213ENST00000618500 PSME1Q06323 249 aa7.1□□□□□ -1.27
SNCA-213ENST00000618500 ABCC6O95255 1503 aa7.1□□□□□ -1.27
SNCA-213ENST00000618500 LRRC37A3O60309 1634 aa7.1□□□□□ -1.27
SNCA-213ENST00000618500 MYOM1P52179 1685 aa7.09□□□□□ -1.27
SNCA-213ENST00000618500 AKAP12Q02952 1782 aa7.09□□□□□ -1.27
SNCA-213ENST00000618500 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
SNCA-213ENST00000618500 APLP2Q06481 763 aa7.09□□□□□ -1.27
SNCA-213ENST00000618500 PAPPAQ13219 1627 aa7.09□□□□□ -1.27
SNCA-213ENST00000618500 ADGRB1O14514 1584 aa7.09□□□□□ -1.27
SNCA-213ENST00000618500 SPATA31A5Q5VU36 1347 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms