RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 APAF1O14727 1248 aa18.42■□□□□ 0.54
CBWD1-226ENST00000618061 PRAM1Q96QH2 718 aa18.41■□□□□ 0.54
CBWD1-226ENST00000618061 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
CBWD1-226ENST00000618061 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
CBWD1-226ENST00000618061 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
CBWD1-226ENST00000618061 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
CBWD1-226ENST00000618061 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
CBWD1-226ENST00000618061 POGKQ9P215 609 aa18.38■□□□□ 0.53
CBWD1-226ENST00000618061 AGLP35573 1532 aa18.38■□□□□ 0.53
CBWD1-226ENST00000618061 PTPRMP28827 1452 aa18.38■□□□□ 0.53
CBWD1-226ENST00000618061 REREQ9P2R6 1566 aa18.37■□□□□ 0.53
CBWD1-226ENST00000618061 YTHDC2Q9H6S0 1430 aaKnown RBP18.37■□□□□ 0.53
CBWD1-226ENST00000618061 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
CBWD1-226ENST00000618061 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
CBWD1-226ENST00000618061 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
CBWD1-226ENST00000618061 MTHFSP49914 203 aa18.35■□□□□ 0.53
CBWD1-226ENST00000618061 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
CBWD1-226ENST00000618061 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
CBWD1-226ENST00000618061 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
CBWD1-226ENST00000618061 A2ML1A8K2U0 1454 aa18.34■□□□□ 0.53
CBWD1-226ENST00000618061 A0A1W2PP64 1363 aa18.34■□□□□ 0.53
CBWD1-226ENST00000618061 POLR3AO14802 1390 aaPredicted RBP18.34■□□□□ 0.53
CBWD1-226ENST00000618061 SHPRHQ149N8 1683 aa18.34■□□□□ 0.53
CBWD1-226ENST00000618061 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
CBWD1-226ENST00000618061 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
CBWD1-226ENST00000618061 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
CBWD1-226ENST00000618061 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.52
CBWD1-226ENST00000618061 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
CBWD1-226ENST00000618061 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
CBWD1-226ENST00000618061 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
CBWD1-226ENST00000618061 GGNBP2Q9H3C7 697 aa18.32■□□□□ 0.52
CBWD1-226ENST00000618061 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
CBWD1-226ENST00000618061 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
CBWD1-226ENST00000618061 RIMS2Q9UQ26 1411 aa18.31■□□□□ 0.52
CBWD1-226ENST00000618061 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
CBWD1-226ENST00000618061 CDK19Q9BWU1 502 aa18.3■□□□□ 0.52
CBWD1-226ENST00000618061 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
CBWD1-226ENST00000618061 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
CBWD1-226ENST00000618061 CABP1Q9NZU7 370 aa18.27■□□□□ 0.51
CBWD1-226ENST00000618061 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
CBWD1-226ENST00000618061 MSH5O43196 834 aa18.26■□□□□ 0.51
CBWD1-226ENST00000618061 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
CBWD1-226ENST00000618061 WWC1Q8IX03 1113 aa18.25■□□□□ 0.51
CBWD1-226ENST00000618061 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
CBWD1-226ENST00000618061 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
CBWD1-226ENST00000618061 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
CBWD1-226ENST00000618061 TCP11L2Q8N4U5 519 aa18.24■□□□□ 0.51
CBWD1-226ENST00000618061 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
CBWD1-226ENST00000618061 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
CBWD1-226ENST00000618061 FYB1O15117 783 aa18.24■□□□□ 0.51
CBWD1-226ENST00000618061 BCAR3O75815 825 aa18.24■□□□□ 0.51
CBWD1-226ENST00000618061 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
CBWD1-226ENST00000618061 METP08581 1390 aa18.23■□□□□ 0.51
CBWD1-226ENST00000618061 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
CBWD1-226ENST00000618061 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
CBWD1-226ENST00000618061 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
CBWD1-226ENST00000618061 FBLN1P23142 703 aa18.23■□□□□ 0.51
CBWD1-226ENST00000618061 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.51
CBWD1-226ENST00000618061 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
CBWD1-226ENST00000618061 NSD2O96028 1365 aa18.22■□□□□ 0.51
CBWD1-226ENST00000618061 E9PSI1 815 aa18.22■□□□□ 0.51
CBWD1-226ENST00000618061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.22■□□□□ 0.51
CBWD1-226ENST00000618061 NRXN3Q9Y4C0 1643 aa18.22■□□□□ 0.51
CBWD1-226ENST00000618061 NKTRP30414 1462 aaKnown RBP18.22■□□□□ 0.51
CBWD1-226ENST00000618061 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.51
CBWD1-226ENST00000618061 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
CBWD1-226ENST00000618061 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
CBWD1-226ENST00000618061 HDGFL2Q7Z4V5 671 aaPredicted RBP18.2■□□□□ 0.5
CBWD1-226ENST00000618061 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
CBWD1-226ENST00000618061 NCKAP5LQ9HCH0 1330 aa18.19■□□□□ 0.5
CBWD1-226ENST00000618061 IQSEC2Q5JU85 1478 aa18.19■□□□□ 0.5
CBWD1-226ENST00000618061 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
CBWD1-226ENST00000618061 TNRQ92752 1358 aa18.18■□□□□ 0.5
CBWD1-226ENST00000618061 NLRP1Q9C000 1473 aa18.18■□□□□ 0.5
CBWD1-226ENST00000618061 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
CBWD1-226ENST00000618061 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
CBWD1-226ENST00000618061 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
CBWD1-226ENST00000618061 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
CBWD1-226ENST00000618061 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.14■□□□□ 0.49
CBWD1-226ENST00000618061 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CBWD1-226ENST00000618061 UBR1Q8IWV7 1749 aa18.13■□□□□ 0.49
CBWD1-226ENST00000618061 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
CBWD1-226ENST00000618061 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
CBWD1-226ENST00000618061 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
CBWD1-226ENST00000618061 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
CBWD1-226ENST00000618061 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
CBWD1-226ENST00000618061 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
CBWD1-226ENST00000618061 LTKP29376 864 aa18.11■□□□□ 0.49
CBWD1-226ENST00000618061 BCL2L13Q9BXK5 485 aa18.11■□□□□ 0.49
CBWD1-226ENST00000618061 TMEM2Q9UHN6 1383 aa18.11■□□□□ 0.49
CBWD1-226ENST00000618061 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
CBWD1-226ENST00000618061 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
CBWD1-226ENST00000618061 PLEKHF1Q96S99 279 aa18.1■□□□□ 0.49
CBWD1-226ENST00000618061 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
CBWD1-226ENST00000618061 NME9Q86XW9 330 aa18.09■□□□□ 0.49
CBWD1-226ENST00000618061 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
CBWD1-226ENST00000618061 PANK1Q8TE04 598 aa18.08■□□□□ 0.49
CBWD1-226ENST00000618061 MED14O60244 1454 aa18.08■□□□□ 0.48
CBWD1-226ENST00000618061 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
CBWD1-226ENST00000618061 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms