RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	KDM2A	Q9Y2K7	1162 aa		13.6	□□□□□ -0.23
CPEB1-215	ENST00000617958	CCDC173	Q0VFZ6	552 aa		13.6	□□□□□ -0.23
CPEB1-215	ENST00000617958	PPP1R9B	Q96SB3	815 aa		13.6	□□□□□ -0.23
CPEB1-215	ENST00000617958	CGNL1	Q0VF96	1302 aa		13.59	□□□□□ -0.23
CPEB1-215	ENST00000617958	HECW2	Q9P2P5	1572 aa		13.59	□□□□□ -0.23
CPEB1-215	ENST00000617958	SIGLEC1	Q9BZZ2	1709 aa		13.59	□□□□□ -0.23
CPEB1-215	ENST00000617958	UTP14C	Q5TAP6	766 aa	Known RBP	13.59	□□□□□ -0.23
CPEB1-215	ENST00000617958	ZSCAN30	Q86W11	494 aa		13.59	□□□□□ -0.23
CPEB1-215	ENST00000617958	SEC24B	O95487	1268 aa		13.58	□□□□□ -0.24
CPEB1-215	ENST00000617958	TRMT2A	Q8IZ69	625 aa	Known RBP	13.58	□□□□□ -0.24
CPEB1-215	ENST00000617958	LAMC1	P11047	1609 aa		13.58	□□□□□ -0.24
CPEB1-215	ENST00000617958	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.58	□□□□□ -0.24
CPEB1-215	ENST00000617958	HS1BP3	Q53T59	392 aa		13.58	□□□□□ -0.24
CPEB1-215	ENST00000617958	MLH3	Q9UHC1	1453 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	RIPK4	P57078	832 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	PLA2R1	Q13018	1463 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	ERBIN	Q96RT1	1412 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	NCOA3	Q9Y6Q9	1424 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	DIP2C	Q9Y2E4	1556 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	ST20-MTHFS	A0A0A6YYL1	179 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	GOLGA2	Q08379	1002 aa		13.57	□□□□□ -0.24
CPEB1-215	ENST00000617958	PDE3A	Q14432	1141 aa		13.56	□□□□□ -0.24
CPEB1-215	ENST00000617958	GZF1	Q9H116	711 aa	Predicted RBP	13.56	□□□□□ -0.24
CPEB1-215	ENST00000617958	CFAP74	Q9C0B2	1584 aa		13.56	□□□□□ -0.24
CPEB1-215	ENST00000617958	NCL	P19338	710 aa	Known RBP	13.56	□□□□□ -0.24
CPEB1-215	ENST00000617958	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.56	□□□□□ -0.24
CPEB1-215	ENST00000617958	NKTR	P30414	1462 aa	Known RBP	13.56	□□□□□ -0.24
CPEB1-215	ENST00000617958	PLEKHH1	Q9ULM0	1364 aa		13.55	□□□□□ -0.24
CPEB1-215	ENST00000617958	UGGT1	Q9NYU2	1555 aa		13.55	□□□□□ -0.24
CPEB1-215	ENST00000617958	SLFN5	Q08AF3	891 aa		13.54	□□□□□ -0.24
CPEB1-215	ENST00000617958	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.54	□□□□□ -0.24
CPEB1-215	ENST00000617958	MROH1	Q8NDA8	1641 aa		13.54	□□□□□ -0.24
CPEB1-215	ENST00000617958	ARX	Q96QS3	562 aa		13.54	□□□□□ -0.24
CPEB1-215	ENST00000617958	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.54	□□□□□ -0.24
CPEB1-215	ENST00000617958	IGHD	P01880	384 aa		13.53	□□□□□ -0.24
CPEB1-215	ENST00000617958	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.53	□□□□□ -0.24
CPEB1-215	ENST00000617958	DDIT3	P35638	169 aa		13.53	□□□□□ -0.24
CPEB1-215	ENST00000617958	UNC13B	O14795	1591 aa		13.52	□□□□□ -0.24
CPEB1-215	ENST00000617958		A0A0U1RQG5	324 aa	Predicted RBP	13.52	□□□□□ -0.24
CPEB1-215	ENST00000617958	NGEF	Q8N5V2	710 aa		13.52	□□□□□ -0.24
CPEB1-215	ENST00000617958	ZNF692	Q9BU19	519 aa	Predicted RBP	13.52	□□□□□ -0.24
CPEB1-215	ENST00000617958	KDM5D	Q9BY66	1539 aa		13.52	□□□□□ -0.24
CPEB1-215	ENST00000617958	TRPM1	Q7Z4N2	1603 aa		13.52	□□□□□ -0.25
CPEB1-215	ENST00000617958	DYNC1I1	O14576	645 aa		13.52	□□□□□ -0.25
CPEB1-215	ENST00000617958	CHGA	P10645	457 aa	Known RBP	13.52	□□□□□ -0.25
CPEB1-215	ENST00000617958	CLUAP1	Q96AJ1	413 aa		13.51	□□□□□ -0.25
CPEB1-215	ENST00000617958	GPRASP1	Q5JY77	1395 aa		13.51	□□□□□ -0.25
CPEB1-215	ENST00000617958	ZNF500	O60304	480 aa	Predicted RBP	13.51	□□□□□ -0.25
CPEB1-215	ENST00000617958	PMFBP1	Q8TBY8	1022 aa		13.51	□□□□□ -0.25
CPEB1-215	ENST00000617958	MSN	P26038	577 aa	Known RBP	13.5	□□□□□ -0.25
CPEB1-215	ENST00000617958	CEP152	O94986	1710 aa		13.5	□□□□□ -0.25
CPEB1-215	ENST00000617958	MAGI2	Q86UL8	1455 aa		13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	CEBPA	P49715	358 aa	Predicted RBP	13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	DMTN	Q08495	405 aa		13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	ANP32B	Q92688	251 aa	Known RBP	13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	GBP4	Q96PP9	640 aa		13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	ADAMTS8	Q9UP79	889 aa		13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	ARHGAP31	Q2M1Z3	1444 aa		13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	IQGAP3	Q86VI3	1631 aa		13.49	□□□□□ -0.25
CPEB1-215	ENST00000617958	GAS2L3	Q86XJ1	694 aa		13.48	□□□□□ -0.25
CPEB1-215	ENST00000617958	PDE4C	Q08493	712 aa		13.48	□□□□□ -0.25
CPEB1-215	ENST00000617958	CSPP1	Q1MSJ5	1256 aa		13.48	□□□□□ -0.25
CPEB1-215	ENST00000617958	ATP10A	O60312	1499 aa		13.48	□□□□□ -0.25
CPEB1-215	ENST00000617958	PRDM15	P57071	1507 aa	Predicted RBP	13.47	□□□□□ -0.25
CPEB1-215	ENST00000617958	MCM5	P33992	734 aa		13.47	□□□□□ -0.25
CPEB1-215	ENST00000617958	NPAT	Q14207	1427 aa		13.47	□□□□□ -0.25
CPEB1-215	ENST00000617958	PIK3C2G	O75747	1445 aa		13.46	□□□□□ -0.25
CPEB1-215	ENST00000617958	KANK1	Q14678	1352 aa		13.46	□□□□□ -0.25
CPEB1-215	ENST00000617958	SNX21	Q969T3	373 aa		13.46	□□□□□ -0.25
CPEB1-215	ENST00000617958		E9PSI1	815 aa		13.46	□□□□□ -0.26
CPEB1-215	ENST00000617958	SMC5	Q8IY18	1101 aa		13.46	□□□□□ -0.26
CPEB1-215	ENST00000617958	NOL7	Q9UMY1	257 aa	Known RBP	13.46	□□□□□ -0.26
CPEB1-215	ENST00000617958	DEPDC5	O75140	1603 aa		13.45	□□□□□ -0.26
CPEB1-215	ENST00000617958	NASP	P49321	788 aa	Predicted RBP	13.45	□□□□□ -0.26
CPEB1-215	ENST00000617958	HSCB	Q8IWL3	235 aa		13.45	□□□□□ -0.26
CPEB1-215	ENST00000617958	FAM13B	Q9NYF5	915 aa		13.45	□□□□□ -0.26
CPEB1-215	ENST00000617958	WDR43	Q15061	677 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CPEB1-215	ENST00000617958	PRAG1	Q86YV5	1406 aa		13.45	□□□□□ -0.26
CPEB1-215	ENST00000617958	CLEC17A	Q6ZS10	378 aa		13.44	□□□□□ -0.26
CPEB1-215	ENST00000617958	C22orf23	Q9BZE7	217 aa		13.44	□□□□□ -0.26
CPEB1-215	ENST00000617958	KIF20A	O95235	890 aa		13.44	□□□□□ -0.26
CPEB1-215	ENST00000617958	CCDC94	Q9BW85	323 aa	Predicted RBP	13.44	□□□□□ -0.26
CPEB1-215	ENST00000617958	RAB3GAP1	Q15042	981 aa		13.43	□□□□□ -0.26
CPEB1-215	ENST00000617958	NBPF1	Q3BBV0	1214 aa		13.43	□□□□□ -0.26
CPEB1-215	ENST00000617958	GTPBP4	Q9BZE4	634 aa	Known RBP	13.43	□□□□□ -0.26
CPEB1-215	ENST00000617958	UQCRHL	A0A096LP55	91 aa		13.43	□□□□□ -0.26
CPEB1-215	ENST00000617958	UQCRH	P07919	91 aa		13.43	□□□□□ -0.26
CPEB1-215	ENST00000617958	ABCC3	O15438	1527 aa		13.43	□□□□□ -0.26
CPEB1-215	ENST00000617958	VWDE	Q8N2E2	1590 aa		13.42	□□□□□ -0.26
CPEB1-215	ENST00000617958	CC2D1B	Q5T0F9	858 aa	Known RBP	13.42	□□□□□ -0.26
CPEB1-215	ENST00000617958	PDLIM2	Q96JY6	352 aa		13.42	□□□□□ -0.26
CPEB1-215	ENST00000617958	TNPO1	Q92973	898 aa	Known RBP	13.42	□□□□□ -0.26
CPEB1-215	ENST00000617958	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.42	□□□□□ -0.26
CPEB1-215	ENST00000617958	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.41	□□□□□ -0.26
CPEB1-215	ENST00000617958	TNNT2	P45379	298 aa	Predicted RBP	13.41	□□□□□ -0.26
CPEB1-215	ENST00000617958	NPC1L1	Q9UHC9	1359 aa		13.41	□□□□□ -0.26
CPEB1-215	ENST00000617958	SASS6	Q6UVJ0	657 aa		13.41	□□□□□ -0.26
CPEB1-215	ENST00000617958	BCAR3	O75815	825 aa		13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	ZSCAN20	P17040	1043 aa	Predicted RBP	13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	ZNF445	P59923	1031 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms