RNA–Protein interactions for RNA: ENST00000617708.1

GTF2IRD2B-207, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-207ENST00000617708 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
GTF2IRD2B-207ENST00000617708 TTC24A2A3L6 582 aaPredicted RBP12.53□□□□□ -0.4
GTF2IRD2B-207ENST00000617708 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
GTF2IRD2B-207ENST00000617708 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 Q3C1V9 767 aa12.5□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 WNT7AO00755 349 aa12.49□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 WFS1O76024 890 aa12.49□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 TRIM32Q13049 653 aa12.47□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 GPIHBP1Q8IV16 184 aa12.47□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
GTF2IRD2B-207ENST00000617708 MMP16P51512 607 aa12.45□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 SMPD1P17405 629 aa12.44□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 CD46P15529 392 aa12.42□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 MRGPRX2Q96LB1 330 aa12.42□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 REPIN1Q9BWE0 567 aaKnown RBP12.42□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 ATP13A2Q9NQ11 1180 aa12.42□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 NFX1Q12986 1120 aaKnown RBP12.41□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 USB1Q9BQ65 265 aaKnown RBP12.41□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 DXOO77932 396 aaKnown RBP12.4□□□□□ -0.42
GTF2IRD2B-207ENST00000617708 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 KDM4AO75164 1064 aa12.39□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 STK17AQ9UEE5 414 aa12.39□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 J3QL48 77 aa12.37□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 WIPF1O43516 503 aa12.37□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 USP46P62068 366 aa12.36□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 MAP2K5Q13163 448 aa12.35□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 SNRPBP14678 240 aaKnown RBP12.34□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 NACADO15069 1562 aa12.34□□□□□ -0.43
GTF2IRD2B-207ENST00000617708 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 WNT7BP56706 349 aa12.32□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 HPS1Q92902 700 aa12.32□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 KIFC2Q96AC6 838 aa12.32□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 HOXA2O43364 376 aa12.3□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 HLA-CQ95604 372 aa12.3□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 SKOR1P84550 965 aa12.29□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 MDM2Q00987 491 aaPredicted RBP12.29□□□□□ -0.44
GTF2IRD2B-207ENST00000617708 IRF6O14896 467 aa12.27□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 JUNDP17535 347 aa12.27□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 TULP1O00294 542 aaPredicted RBP12.24□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 LCE2CQ5TA81 110 aa12.24□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.45
GTF2IRD2B-207ENST00000617708 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 CLCN1P35523 988 aa12.19□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 SIAH2O43255 324 aa12.15□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 NXF1Q9UBU9 619 aaKnown RBP12.15□□□□□ -0.46
GTF2IRD2B-207ENST00000617708 CAPN5O15484 640 aaPredicted RBP12.14□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 BMP1P13497 986 aa12.14□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 CCNYL3P0C7X3 344 aa12.13□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 FDX1P10109 184 aa12.12□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 MS4A1P11836 297 aa12.12□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 TRIM46Q7Z4K8 759 aa12.12□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 NPAS3Q8IXF0 933 aa12.11□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 SH3BP2P78314 561 aa12.1□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 IRF7Q92985 503 aa12.1□□□□□ -0.47
GTF2IRD2B-207ENST00000617708 PTPRNQ16849 979 aa12.08□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 PCDHGC3Q9UN70 934 aa12.08□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 KDM2AQ9Y2K7 1162 aa12.08□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 UNC93B1Q9H1C4 597 aa12.07□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 GMPRP36959 345 aa12.06□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 ZSCAN1Q8NBB4 408 aa12.04□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 EVA1BQ9NVM1 165 aa12.04□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 H3BM21 787 aa12.03□□□□□ -0.48
GTF2IRD2B-207ENST00000617708 VEGFBP49765 207 aa12.02□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 ZFP42Q96MM3 310 aa12.02□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 KCNH2Q12809 1159 aa12.01□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 ZNF511Q8NB15 262 aa12.01□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 BAP1Q92560 729 aa12.01□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 VARSP26640 1264 aaKnown RBP12□□□□□ -0.49
GTF2IRD2B-207ENST00000617708 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms