RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 RBM33Q96EV2 1170 aaKnown RBP28.37■■■□□ 2.13
SDHA-220ENST00000617470 PLEKHH1Q9ULM0 1364 aa28.37■■■□□ 2.13
SDHA-220ENST00000617470 PTCH1Q13635 1447 aa28.36■■■□□ 2.13
SDHA-220ENST00000617470 STRCP1A6NGW2 1772 aa28.35■■■□□ 2.13
SDHA-220ENST00000617470 SIRT1Q96EB6 747 aa28.35■■■□□ 2.13
SDHA-220ENST00000617470 FAM135BQ49AJ0 1406 aa28.34■■■□□ 2.13
SDHA-220ENST00000617470 NKTRP30414 1462 aaKnown RBP28.33■■■□□ 2.13
SDHA-220ENST00000617470 CCER2I3L3R5 266 aa28.32■■■□□ 2.12
SDHA-220ENST00000617470 MINK1Q8N4C8 1332 aaPredicted RBP28.31■■■□□ 2.12
SDHA-220ENST00000617470 C14orf37Q86TY3 774 aa28.31■■■□□ 2.12
SDHA-220ENST00000617470 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
SDHA-220ENST00000617470 TESK2Q96S53 571 aa28.26■■■□□ 2.11
SDHA-220ENST00000617470 TMEM94Q12767 1356 aa28.26■■■□□ 2.11
SDHA-220ENST00000617470 LRRC7Q96NW7 1537 aa28.22■■■□□ 2.11
SDHA-220ENST00000617470 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.21■■■□□ 2.11
SDHA-220ENST00000617470 TMF1P82094 1093 aa28.2■■■□□ 2.11
SDHA-220ENST00000617470 SBNO2Q9Y2G9 1366 aa28.2■■■□□ 2.1
SDHA-220ENST00000617470 POLR3GLQ9BT43 218 aa28.19■■■□□ 2.1
SDHA-220ENST00000617470 LTBP4Q8N2S1 1624 aa28.19■■■□□ 2.1
SDHA-220ENST00000617470 SLC24A1O60721 1099 aa28.18■■■□□ 2.1
SDHA-220ENST00000617470 EVC2Q86UK5 1308 aa28.18■■■□□ 2.1
SDHA-220ENST00000617470 ADGRL3Q9HAR2 1447 aa28.17■■■□□ 2.1
SDHA-220ENST00000617470 DISP3Q9P2K9 1392 aa28.17■■■□□ 2.1
SDHA-220ENST00000617470 NALCNQ8IZF0 1738 aa28.16■■■□□ 2.1
SDHA-220ENST00000617470 PRKRIP1Q9H875 184 aaPredicted RBP28.16■■■□□ 2.1
SDHA-220ENST00000617470 SRPK2P78362 688 aaKnown RBP28.15■■■□□ 2.1
SDHA-220ENST00000617470 SCAF1Q9H7N4 1312 aaKnown RBP28.15■■■□□ 2.1
SDHA-220ENST00000617470 WASLO00401 505 aaPredicted RBP28.15■■■□□ 2.1
SDHA-220ENST00000617470 CDK19Q9BWU1 502 aa28.15■■■□□ 2.1
SDHA-220ENST00000617470 C19orf44Q9H6X5 657 aa28.15■■■□□ 2.1
SDHA-220ENST00000617470 NCOA3Q9Y6Q9 1424 aa28.14■■■□□ 2.1
SDHA-220ENST00000617470 NUTM2FA1L443 756 aa28.13■■■□□ 2.09
SDHA-220ENST00000617470 TULP4Q9NRJ4 1543 aa28.13■■■□□ 2.09
SDHA-220ENST00000617470 MSH6P52701 1360 aa28.13■■■□□ 2.09
SDHA-220ENST00000617470 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
SDHA-220ENST00000617470 XIRP1Q702N8 1843 aaKnown RBP28.12■■■□□ 2.09
SDHA-220ENST00000617470 ADGRB2O60241 1585 aa28.11■■■□□ 2.09
SDHA-220ENST00000617470 ATF3P18847 181 aa28.1■■■□□ 2.09
SDHA-220ENST00000617470 CDCA8Q53HL2 280 aa28.1■■■□□ 2.09
SDHA-220ENST00000617470 CDC42BPGQ6DT37 1551 aa28.06■■■□□ 2.08
SDHA-220ENST00000617470 CCDC184Q52MB2 194 aa28.05■■■□□ 2.08
SDHA-220ENST00000617470 CADPS2Q86UW7 1296 aa28.04■■■□□ 2.08
SDHA-220ENST00000617470 NUDT16Q96DE0 195 aaKnown RBP28.02■■■□□ 2.08
SDHA-220ENST00000617470 DCCP43146 1447 aa28.02■■■□□ 2.08
SDHA-220ENST00000617470 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
SDHA-220ENST00000617470 FMN2Q9NZ56 1722 aa28■■■□□ 2.07
SDHA-220ENST00000617470 PRR36Q9H6K5 1346 aa28■■■□□ 2.07
SDHA-220ENST00000617470 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
SDHA-220ENST00000617470 CERKQ8TCT0 537 aa27.99■■■□□ 2.07
SDHA-220ENST00000617470 PUS7Q96PZ0 661 aaKnown RBP27.98■■■□□ 2.07
SDHA-220ENST00000617470 ATP7BP35670 1465 aa27.97■■■□□ 2.07
SDHA-220ENST00000617470 CCDC61Q9Y6R9 512 aa27.96■■■□□ 2.07
SDHA-220ENST00000617470 ESCO1Q5FWF5 840 aa27.95■■■□□ 2.07
SDHA-220ENST00000617470 ANKARQ7Z5J8 1434 aa27.95■■■□□ 2.07
SDHA-220ENST00000617470 CABP1Q9NZU7 370 aa27.95■■■□□ 2.06
SDHA-220ENST00000617470 GTF3C3Q9Y5Q9 886 aa27.95■■■□□ 2.06
SDHA-220ENST00000617470 USP32Q8NFA0 1604 aa27.94■■■□□ 2.06
SDHA-220ENST00000617470 MST1RQ04912 1400 aa27.94■■■□□ 2.06
SDHA-220ENST00000617470 SLC12A5Q9H2X9 1139 aa27.93■■■□□ 2.06
SDHA-220ENST00000617470 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
SDHA-220ENST00000617470 PPIP5K1Q6PFW1 1433 aa27.93■■■□□ 2.06
SDHA-220ENST00000617470 PER1O15534 1290 aaPredicted RBP27.93■■■□□ 2.06
SDHA-220ENST00000617470 C1orf167Q5SNV9 1468 aa27.92■■■□□ 2.06
SDHA-220ENST00000617470 RGPD8O14715 1765 aaPredicted RBP27.92■■■□□ 2.06
SDHA-220ENST00000617470 PMFBP1Q8TBY8 1022 aa27.91■■■□□ 2.06
SDHA-220ENST00000617470 ORAI2Q96SN7 254 aa27.91■■■□□ 2.06
SDHA-220ENST00000617470 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
SDHA-220ENST00000617470 MRS2Q9HD23 443 aa27.88■■■□□ 2.05
SDHA-220ENST00000617470 PHF8Q9UPP1 1060 aa27.88■■■□□ 2.05
SDHA-220ENST00000617470 UBAP1LF5GYI3 381 aa27.88■■■□□ 2.05
SDHA-220ENST00000617470 TOM1O60784 492 aa27.88■■■□□ 2.05
SDHA-220ENST00000617470 IQSEC2Q5JU85 1478 aa27.87■■■□□ 2.05
SDHA-220ENST00000617470 ITSN1Q15811 1721 aa27.87■■■□□ 2.05
SDHA-220ENST00000617470 NGDNQ8NEJ9 315 aaKnown RBP27.86■■■□□ 2.05
SDHA-220ENST00000617470 MYOM1P52179 1685 aa27.86■■■□□ 2.05
SDHA-220ENST00000617470 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
SDHA-220ENST00000617470 PANK3Q9H999 370 aa27.86■■■□□ 2.05
SDHA-220ENST00000617470 NINLQ9Y2I6 1382 aa27.85■■■□□ 2.05
SDHA-220ENST00000617470 PLEKHG3A1L390 1219 aa27.84■■■□□ 2.05
SDHA-220ENST00000617470 TERF2IPQ9NYB0 399 aa27.84■■■□□ 2.05
SDHA-220ENST00000617470 ACEP12821 1306 aa27.84■■■□□ 2.05
SDHA-220ENST00000617470 PIP4K2BP78356 416 aa27.83■■■□□ 2.05
SDHA-220ENST00000617470 HDGFL2Q7Z4V5 671 aaPredicted RBP27.82■■■□□ 2.04
SDHA-220ENST00000617470 KTN1Q86UP2 1357 aaKnown RBP27.82■■■□□ 2.04
SDHA-220ENST00000617470 BRINP3Q76B58 766 aa27.82■■■□□ 2.04
SDHA-220ENST00000617470 PARD3Q8TEW0 1356 aa27.8■■■□□ 2.04
SDHA-220ENST00000617470 FOXO3O43524 673 aa27.8■■■□□ 2.04
SDHA-220ENST00000617470 RALBP1Q15311 655 aa27.79■■■□□ 2.04
SDHA-220ENST00000617470 A0A1W2PP64 1363 aa27.79■■■□□ 2.04
SDHA-220ENST00000617470 ANKRD36BQ8N2N9 1353 aa27.79■■■□□ 2.04
SDHA-220ENST00000617470 CD163L1Q9NR16 1453 aa27.77■■■□□ 2.04
SDHA-220ENST00000617470 PSME1Q06323 249 aa27.77■■■□□ 2.04
SDHA-220ENST00000617470 DDX17Q92841 729 aaKnown RBP27.77■■■□□ 2.04
SDHA-220ENST00000617470 ZNF692Q9BU19 519 aaPredicted RBP27.76■■■□□ 2.03
SDHA-220ENST00000617470 POLR3AO14802 1390 aaPredicted RBP27.76■■■□□ 2.03
SDHA-220ENST00000617470 KIF1AQ12756 1690 aa27.75■■■□□ 2.03
SDHA-220ENST00000617470 XPCQ01831 940 aaPredicted RBP27.75■■■□□ 2.03
SDHA-220ENST00000617470 FAM9BQ8IZU0 186 aa27.75■■■□□ 2.03
SDHA-220ENST00000617470 MYBBP1AQ9BQG0 1328 aaKnown RBP27.75■■■□□ 2.03
SDHA-220ENST00000617470 CPSF1Q10570 1443 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms