RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
PCDHGC3-204ENST00000617222 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
PCDHGC3-204ENST00000617222 NCOA3Q9Y6Q9 1424 aa21.98■■□□□ 1.11
PCDHGC3-204ENST00000617222 ARHGEF28Q8N1W1 1705 aaKnown RBP21.96■■□□□ 1.11
PCDHGC3-204ENST00000617222 MSH6P52701 1360 aa21.95■■□□□ 1.1
PCDHGC3-204ENST00000617222 ADGRL3Q9HAR2 1447 aa21.95■■□□□ 1.1
PCDHGC3-204ENST00000617222 ATF3P18847 181 aa21.93■■□□□ 1.1
PCDHGC3-204ENST00000617222 TESK2Q96S53 571 aa21.93■■□□□ 1.1
PCDHGC3-204ENST00000617222 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
PCDHGC3-204ENST00000617222 WASLO00401 505 aaPredicted RBP21.91■■□□□ 1.1
PCDHGC3-204ENST00000617222 CADPS2Q86UW7 1296 aa21.9■■□□□ 1.1
PCDHGC3-204ENST00000617222 CDK19Q9BWU1 502 aa21.9■■□□□ 1.1
PCDHGC3-204ENST00000617222 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
PCDHGC3-204ENST00000617222 XIRP1Q702N8 1843 aaKnown RBP21.88■■□□□ 1.09
PCDHGC3-204ENST00000617222 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
PCDHGC3-204ENST00000617222 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
PCDHGC3-204ENST00000617222 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
PCDHGC3-204ENST00000617222 QRICH2Q9H0J4 1663 aa21.86■■□□□ 1.09
PCDHGC3-204ENST00000617222 SRPK2P78362 688 aaKnown RBP21.86■■□□□ 1.09
PCDHGC3-204ENST00000617222 TMF1P82094 1093 aa21.86■■□□□ 1.09
PCDHGC3-204ENST00000617222 CABP2Q9NPB3 220 aa21.86■■□□□ 1.09
PCDHGC3-204ENST00000617222 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
PCDHGC3-204ENST00000617222 DCCP43146 1447 aa21.85■■□□□ 1.09
PCDHGC3-204ENST00000617222 IQSEC2Q5JU85 1478 aa21.84■■□□□ 1.09
PCDHGC3-204ENST00000617222 UBAP1LF5GYI3 381 aa21.84■■□□□ 1.09
PCDHGC3-204ENST00000617222 TOM1O60784 492 aa21.83■■□□□ 1.09
PCDHGC3-204ENST00000617222 SLAIN2Q9P270 581 aa21.83■■□□□ 1.09
PCDHGC3-204ENST00000617222 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
PCDHGC3-204ENST00000617222 ADGRB2O60241 1585 aa21.82■■□□□ 1.08
PCDHGC3-204ENST00000617222 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
PCDHGC3-204ENST00000617222 CDC42BPGQ6DT37 1551 aa21.81■■□□□ 1.08
PCDHGC3-204ENST00000617222 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
PCDHGC3-204ENST00000617222 TULP4Q9NRJ4 1543 aa21.8■■□□□ 1.08
PCDHGC3-204ENST00000617222 C11orf95C9JLR9 678 aaPredicted RBP21.79■■□□□ 1.08
PCDHGC3-204ENST00000617222 MST1RQ04912 1400 aa21.79■■□□□ 1.08
PCDHGC3-204ENST00000617222 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
PCDHGC3-204ENST00000617222 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
PCDHGC3-204ENST00000617222 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
PCDHGC3-204ENST00000617222 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
PCDHGC3-204ENST00000617222 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.08
PCDHGC3-204ENST00000617222 PIP4K2BP78356 416 aa21.77■■□□□ 1.08
PCDHGC3-204ENST00000617222 PUS7Q96PZ0 661 aaKnown RBP21.77■■□□□ 1.08
PCDHGC3-204ENST00000617222 CCDC61Q9Y6R9 512 aa21.76■■□□□ 1.07
PCDHGC3-204ENST00000617222 ANKARQ7Z5J8 1434 aa21.75■■□□□ 1.07
PCDHGC3-204ENST00000617222 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
PCDHGC3-204ENST00000617222 FMN2Q9NZ56 1722 aa21.74■■□□□ 1.07
PCDHGC3-204ENST00000617222 BRINP3Q76B58 766 aa21.73■■□□□ 1.07
PCDHGC3-204ENST00000617222 PMFBP1Q8TBY8 1022 aa21.73■■□□□ 1.07
PCDHGC3-204ENST00000617222 TMC1Q8TDI8 760 aa21.73■■□□□ 1.07
PCDHGC3-204ENST00000617222 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
PCDHGC3-204ENST00000617222 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
PCDHGC3-204ENST00000617222 ATAD2Q6PL18 1390 aa21.73■■□□□ 1.07
PCDHGC3-204ENST00000617222 ATP7BP35670 1465 aa21.71■■□□□ 1.07
PCDHGC3-204ENST00000617222 KIF7Q2M1P5 1343 aa21.71■■□□□ 1.07
PCDHGC3-204ENST00000617222 SLC12A5Q9H2X9 1139 aa21.7■■□□□ 1.06
PCDHGC3-204ENST00000617222 PLEKHG3A1L390 1219 aa21.69■■□□□ 1.06
PCDHGC3-204ENST00000617222 NGDNQ8NEJ9 315 aaKnown RBP21.69■■□□□ 1.06
PCDHGC3-204ENST00000617222 PPIP5K1Q6PFW1 1433 aa21.69■■□□□ 1.06
PCDHGC3-204ENST00000617222 USP32Q8NFA0 1604 aa21.69■■□□□ 1.06
PCDHGC3-204ENST00000617222 FOXO3O43524 673 aa21.68■■□□□ 1.06
PCDHGC3-204ENST00000617222 CCDC7Q96M83 1385 aa21.67■■□□□ 1.06
PCDHGC3-204ENST00000617222 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
PCDHGC3-204ENST00000617222 DDX17Q92841 729 aaKnown RBP21.67■■□□□ 1.06
PCDHGC3-204ENST00000617222 ACEP12821 1306 aa21.66■■□□□ 1.06
PCDHGC3-204ENST00000617222 ZNF316A6NFI3 1004 aaPredicted RBP21.64■■□□□ 1.05
PCDHGC3-204ENST00000617222 RGPD8O14715 1765 aaPredicted RBP21.64■■□□□ 1.05
PCDHGC3-204ENST00000617222 PSME1Q06323 249 aa21.63■■□□□ 1.05
PCDHGC3-204ENST00000617222 XPCQ01831 940 aaPredicted RBP21.62■■□□□ 1.05
PCDHGC3-204ENST00000617222 FBXO41Q8TF61 875 aa21.62■■□□□ 1.05
PCDHGC3-204ENST00000617222 NINLQ9Y2I6 1382 aa21.61■■□□□ 1.05
PCDHGC3-204ENST00000617222 NPHP3Q7Z494 1330 aa21.61■■□□□ 1.05
PCDHGC3-204ENST00000617222 KRT28Q7Z3Y7 464 aa21.61■■□□□ 1.05
PCDHGC3-204ENST00000617222 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
PCDHGC3-204ENST00000617222 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
PCDHGC3-204ENST00000617222 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
PCDHGC3-204ENST00000617222 ZNF692Q9BU19 519 aaPredicted RBP21.6■■□□□ 1.05
PCDHGC3-204ENST00000617222 ROBO1Q9Y6N7 1651 aa21.6■■□□□ 1.05
PCDHGC3-204ENST00000617222 TOPAZ1Q8N9V7 1692 aa21.58■■□□□ 1.05
PCDHGC3-204ENST00000617222 PANK3Q9H999 370 aa21.57■■□□□ 1.04
PCDHGC3-204ENST00000617222 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
PCDHGC3-204ENST00000617222 CPSF1Q10570 1443 aaKnown RBP21.56■■□□□ 1.04
PCDHGC3-204ENST00000617222 KIF1AQ12756 1690 aa21.56■■□□□ 1.04
PCDHGC3-204ENST00000617222 SOS2Q07890 1332 aaPredicted RBP21.55■■□□□ 1.04
PCDHGC3-204ENST00000617222 A0A1W2PP64 1363 aa21.55■■□□□ 1.04
PCDHGC3-204ENST00000617222 KTN1Q86UP2 1357 aaKnown RBP21.55■■□□□ 1.04
PCDHGC3-204ENST00000617222 ANKRD36BQ8N2N9 1353 aa21.55■■□□□ 1.04
PCDHGC3-204ENST00000617222 CD163L1Q9NR16 1453 aa21.55■■□□□ 1.04
PCDHGC3-204ENST00000617222 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
PCDHGC3-204ENST00000617222 HSPA1LP34931 641 aa21.54■■□□□ 1.04
PCDHGC3-204ENST00000617222 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
PCDHGC3-204ENST00000617222 USP6P35125 1406 aa21.52■■□□□ 1.04
PCDHGC3-204ENST00000617222 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
PCDHGC3-204ENST00000617222 LMOD2Q6P5Q4 547 aa21.51■■□□□ 1.03
PCDHGC3-204ENST00000617222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.03
PCDHGC3-204ENST00000617222 TTC21BQ7Z4L5 1316 aa21.51■■□□□ 1.03
PCDHGC3-204ENST00000617222 PXDNQ92626 1479 aa21.51■■□□□ 1.03
PCDHGC3-204ENST00000617222 AHDC1Q5TGY3 1603 aaPredicted RBP21.51■■□□□ 1.03
PCDHGC3-204ENST00000617222 LRRC59Q96AG4 307 aaKnown RBP21.5■■□□□ 1.03
PCDHGC3-204ENST00000617222 MYOM1P52179 1685 aa21.5■■□□□ 1.03
PCDHGC3-204ENST00000617222 SBNO1A3KN83 1393 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms