RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 TULP4Q9NRJ4 1543 aa28.84■■■□□ 2.21
CLN5-203ENST00000616833 DMRT2Q9Y5R5 561 aa28.84■■■□□ 2.21
CLN5-203ENST00000616833 DUSP27Q5VZP5 1158 aa28.83■■■□□ 2.21
CLN5-203ENST00000616833 CRBNQ96SW2 442 aa28.82■■■□□ 2.2
CLN5-203ENST00000616833 GOLGA2Q08379 1002 aa28.82■■■□□ 2.2
CLN5-203ENST00000616833 RRP7AQ9Y3A4 280 aaKnown RBP28.82■■■□□ 2.2
CLN5-203ENST00000616833 TMEM131LA2VDJ0 1609 aa28.82■■■□□ 2.2
CLN5-203ENST00000616833 POGKQ9P215 609 aa28.81■■■□□ 2.2
CLN5-203ENST00000616833 MSH5O43196 834 aa28.8■■■□□ 2.2
CLN5-203ENST00000616833 INSRP06213 1382 aa28.8■■■□□ 2.2
CLN5-203ENST00000616833 SKAP1Q86WV1 359 aa28.79■■■□□ 2.2
CLN5-203ENST00000616833 MTHFSP49914 203 aa28.78■■■□□ 2.2
CLN5-203ENST00000616833 ZNF521Q96K83 1311 aa28.78■■■□□ 2.2
CLN5-203ENST00000616833 CLTCQ00610 1675 aaKnown RBP28.77■■■□□ 2.2
CLN5-203ENST00000616833 CGNL1Q0VF96 1302 aa28.75■■■□□ 2.19
CLN5-203ENST00000616833 GGNBP2Q9H3C7 697 aa28.74■■■□□ 2.19
CLN5-203ENST00000616833 SLFN5Q08AF3 891 aa28.73■■■□□ 2.19
CLN5-203ENST00000616833 WAPLQ7Z5K2 1190 aa28.73■■■□□ 2.19
CLN5-203ENST00000616833 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.19
CLN5-203ENST00000616833 PLPPR3Q6T4P5 718 aa28.7■■■□□ 2.18
CLN5-203ENST00000616833 A0A1W2PP64 1363 aa28.69■■■□□ 2.18
CLN5-203ENST00000616833 ANKRD36BQ8N2N9 1353 aa28.68■■■□□ 2.18
CLN5-203ENST00000616833 PTPRMP28827 1452 aa28.68■■■□□ 2.18
CLN5-203ENST00000616833 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
CLN5-203ENST00000616833 ZFYVE9O95405 1425 aa28.67■■■□□ 2.18
CLN5-203ENST00000616833 BCAR3O75815 825 aa28.66■■■□□ 2.18
CLN5-203ENST00000616833 CDK19Q9BWU1 502 aa28.65■■■□□ 2.18
CLN5-203ENST00000616833 ESF1Q9H501 851 aaKnown RBP28.65■■■□□ 2.18
CLN5-203ENST00000616833 ALKQ9UM73 1620 aa28.64■■■□□ 2.18
CLN5-203ENST00000616833 FBLN1P23142 703 aa28.63■■■□□ 2.17
CLN5-203ENST00000616833 CABP1Q9NZU7 370 aa28.63■■■□□ 2.17
CLN5-203ENST00000616833 SHPRHQ149N8 1683 aa28.62■■■□□ 2.17
CLN5-203ENST00000616833 WWC1Q8IX03 1113 aa28.62■■■□□ 2.17
CLN5-203ENST00000616833 TCP11L2Q8N4U5 519 aa28.62■■■□□ 2.17
CLN5-203ENST00000616833 ANP32EQ9BTT0 268 aa28.62■■■□□ 2.17
CLN5-203ENST00000616833 U2AF1L5P0DN76 240 aaPredicted RBP28.61■■■□□ 2.17
CLN5-203ENST00000616833 U2AF1Q01081 240 aaKnown RBP eCLIP28.61■■■□□ 2.17
CLN5-203ENST00000616833 KIF13AQ9H1H9 1805 aa28.61■■■□□ 2.17
CLN5-203ENST00000616833 A2ML1A8K2U0 1454 aa28.6■■■□□ 2.17
CLN5-203ENST00000616833 FANCIQ9NVI1 1328 aa28.6■■■□□ 2.17
CLN5-203ENST00000616833 RIMS2Q9UQ26 1411 aa28.59■■■□□ 2.17
CLN5-203ENST00000616833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.59■■■□□ 2.17
CLN5-203ENST00000616833 U2SURPO15042 1029 aaKnown RBP28.58■■■□□ 2.17
CLN5-203ENST00000616833 TRMT2AQ8IZ69 625 aaKnown RBP28.58■■■□□ 2.17
CLN5-203ENST00000616833 CFAP53Q96M91 514 aa28.58■■■□□ 2.17
CLN5-203ENST00000616833 RUNDC1Q96C34 613 aa28.57■■■□□ 2.16
CLN5-203ENST00000616833 E9PSI1 815 aa28.56■■■□□ 2.16
CLN5-203ENST00000616833 FYB1O15117 783 aa28.56■■■□□ 2.16
CLN5-203ENST00000616833 AGLP35573 1532 aa28.56■■■□□ 2.16
CLN5-203ENST00000616833 TXNDC2Q86VQ3 553 aa28.56■■■□□ 2.16
CLN5-203ENST00000616833 ZMYM3Q14202 1370 aa28.55■■■□□ 2.16
CLN5-203ENST00000616833 NCKAP5LQ9HCH0 1330 aa28.54■■■□□ 2.16
CLN5-203ENST00000616833 NKTRP30414 1462 aaKnown RBP28.53■■■□□ 2.16
CLN5-203ENST00000616833 TERF2IPQ9NYB0 399 aa28.53■■■□□ 2.16
CLN5-203ENST00000616833 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
CLN5-203ENST00000616833 PUS7Q96PZ0 661 aaKnown RBP28.52■■■□□ 2.16
CLN5-203ENST00000616833 CD163L1Q9NR16 1453 aa28.52■■■□□ 2.16
CLN5-203ENST00000616833 ABCC11Q96J66 1382 aa28.51■■■□□ 2.15
CLN5-203ENST00000616833 USP32Q8NFA0 1604 aa28.51■■■□□ 2.15
CLN5-203ENST00000616833 CEBPAP49715 358 aaPredicted RBP28.5■■■□□ 2.15
CLN5-203ENST00000616833 SPATA31D1Q6ZQQ2 1576 aa28.5■■■□□ 2.15
CLN5-203ENST00000616833 BCL2L13Q9BXK5 485 aa28.5■■■□□ 2.15
CLN5-203ENST00000616833 REREQ9P2R6 1566 aa28.5■■■□□ 2.15
CLN5-203ENST00000616833 METP08581 1390 aa28.5■■■□□ 2.15
CLN5-203ENST00000616833 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
CLN5-203ENST00000616833 NPM2Q86SE8 214 aaKnown RBP28.49■■■□□ 2.15
CLN5-203ENST00000616833 PPP6R1Q9UPN7 881 aa28.49■■■□□ 2.15
CLN5-203ENST00000616833 ARHGEF40Q8TER5 1519 aa28.49■■■□□ 2.15
CLN5-203ENST00000616833 HDGFL2Q7Z4V5 671 aaPredicted RBP28.48■■■□□ 2.15
CLN5-203ENST00000616833 FRAT1Q92837 279 aaPredicted RBP28.48■■■□□ 2.15
CLN5-203ENST00000616833 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.46■■■□□ 2.15
CLN5-203ENST00000616833 ERICH6Q7L0X2 663 aa28.45■■■□□ 2.14
CLN5-203ENST00000616833 NSD2O96028 1365 aa28.44■■■□□ 2.14
CLN5-203ENST00000616833 NUTM2FA1L443 756 aa28.44■■■□□ 2.14
CLN5-203ENST00000616833 CANXP27824 592 aaKnown RBP28.44■■■□□ 2.14
CLN5-203ENST00000616833 ZRANB1Q9UGI0 708 aa28.44■■■□□ 2.14
CLN5-203ENST00000616833 PANK1Q8TE04 598 aa28.43■■■□□ 2.14
CLN5-203ENST00000616833 TNNQ9UQP3 1299 aa28.43■■■□□ 2.14
CLN5-203ENST00000616833 IQSEC2Q5JU85 1478 aa28.42■■■□□ 2.14
CLN5-203ENST00000616833 TSR2Q969E8 191 aaKnown RBP28.4■■■□□ 2.14
CLN5-203ENST00000616833 NINLQ9Y2I6 1382 aa28.39■■■□□ 2.14
CLN5-203ENST00000616833 COG6Q9Y2V7 657 aa28.39■■■□□ 2.14
CLN5-203ENST00000616833 PDE4AP27815 886 aa28.38■■■□□ 2.13
CLN5-203ENST00000616833 NLRP1Q9C000 1473 aa28.38■■■□□ 2.13
CLN5-203ENST00000616833 TCERG1O14776 1098 aaKnown RBP28.37■■■□□ 2.13
CLN5-203ENST00000616833 TNRQ92752 1358 aa28.37■■■□□ 2.13
CLN5-203ENST00000616833 SETD1AO15047 1707 aaKnown RBP28.37■■■□□ 2.13
CLN5-203ENST00000616833 NRXN3Q9Y4C0 1643 aa28.37■■■□□ 2.13
CLN5-203ENST00000616833 NME9Q86XW9 330 aa28.36■■■□□ 2.13
CLN5-203ENST00000616833 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
CLN5-203ENST00000616833 WASLO00401 505 aaPredicted RBP28.35■■■□□ 2.13
CLN5-203ENST00000616833 CLUAP1Q96AJ1 413 aa28.34■■■□□ 2.13
CLN5-203ENST00000616833 KDM2BQ8NHM5 1336 aa28.34■■■□□ 2.13
CLN5-203ENST00000616833 PHF23Q9BUL5 403 aaPredicted RBP28.34■■■□□ 2.13
CLN5-203ENST00000616833 NGEFQ8N5V2 710 aa28.33■■■□□ 2.13
CLN5-203ENST00000616833 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.33■■■□□ 2.13
CLN5-203ENST00000616833 SLC26A8Q96RN1 970 aa28.33■■■□□ 2.13
CLN5-203ENST00000616833 DIAPH1O60610 1272 aaKnown RBP28.32■■■□□ 2.12
CLN5-203ENST00000616833 RARSP54136 660 aaKnown RBP28.32■■■□□ 2.12
CLN5-203ENST00000616833 PLEKHF1Q96S99 279 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms