RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 FTSJ3Q8IY81 847 aaKnown RBP20.43■□□□□ 0.86
NOP56-220ENST00000616692 PLEKHG1Q9ULL1 1385 aa20.43■□□□□ 0.86
NOP56-220ENST00000616692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.869e-11■■■□□ 18.7
NOP56-220ENST00000616692 ZFYVE9O95405 1425 aa20.41■□□□□ 0.86
NOP56-220ENST00000616692 ANP32AP39687 249 aaKnown RBP20.41■□□□□ 0.86
NOP56-220ENST00000616692 GCC2Q8IWJ2 1684 aa20.4■□□□□ 0.86
NOP56-220ENST00000616692 CHRM1P11229 460 aaPredicted RBP20.4■□□□□ 0.86
NOP56-220ENST00000616692 DIP2AQ14689 1571 aa20.4■□□□□ 0.86
NOP56-220ENST00000616692 UNC13BO14795 1591 aa20.39■□□□□ 0.85
NOP56-220ENST00000616692 ROBO1Q9Y6N7 1651 aa20.39■□□□□ 0.85
NOP56-220ENST00000616692 PROSER2Q86WR7 435 aaPredicted RBP20.39■□□□□ 0.85
NOP56-220ENST00000616692 ANKRD50Q9ULJ7 1429 aa20.38■□□□□ 0.85
NOP56-220ENST00000616692 MSH6P52701 1360 aa20.38■□□□□ 0.85
NOP56-220ENST00000616692 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
NOP56-220ENST00000616692 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
NOP56-220ENST00000616692 SECISBP2LQ93073 1101 aaKnown RBP20.38■□□□□ 0.85
NOP56-220ENST00000616692 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
NOP56-220ENST00000616692 TMEM131LA2VDJ0 1609 aa20.36■□□□□ 0.85
NOP56-220ENST00000616692 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
NOP56-220ENST00000616692 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
NOP56-220ENST00000616692 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
NOP56-220ENST00000616692 ROCK1Q13464 1354 aa20.35■□□□□ 0.85
NOP56-220ENST00000616692 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
NOP56-220ENST00000616692 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
NOP56-220ENST00000616692 JCADQ9P266 1359 aa20.31■□□□□ 0.84
NOP56-220ENST00000616692 CHIC2Q9UKJ5 165 aa20.31■□□□□ 0.84
NOP56-220ENST00000616692 SLC26A8Q96RN1 970 aa20.3■□□□□ 0.84
NOP56-220ENST00000616692 FOXD1Q16676 465 aa20.3■□□□□ 0.84
NOP56-220ENST00000616692 IQGAP3Q86VI3 1631 aa20.3■□□□□ 0.84
NOP56-220ENST00000616692 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
NOP56-220ENST00000616692 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
NOP56-220ENST00000616692 PHLPP1O60346 1717 aa20.29■□□□□ 0.84
NOP56-220ENST00000616692 PDCL3Q9H2J4 239 aa20.28■□□□□ 0.84
NOP56-220ENST00000616692 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
NOP56-220ENST00000616692 RRAGDQ9NQL2 400 aaPredicted RBP20.26■□□□□ 0.83
NOP56-220ENST00000616692 COL16A1Q07092 1604 aaPredicted RBP20.25■□□□□ 0.83
NOP56-220ENST00000616692 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
NOP56-220ENST00000616692 TRPM2O94759 1503 aa20.25■□□□□ 0.83
NOP56-220ENST00000616692 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
NOP56-220ENST00000616692 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
NOP56-220ENST00000616692 DCCP43146 1447 aa20.24■□□□□ 0.83
NOP56-220ENST00000616692 ADAMTS13Q76LX8 1427 aa20.24■□□□□ 0.83
NOP56-220ENST00000616692 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
NOP56-220ENST00000616692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
NOP56-220ENST00000616692 E9PCH4 1651 aa20.24■□□□□ 0.83
NOP56-220ENST00000616692 AMER1Q5JTC6 1135 aaPredicted RBP20.23■□□□□ 0.83
NOP56-220ENST00000616692 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
NOP56-220ENST00000616692 SHPRHQ149N8 1683 aa20.22■□□□□ 0.83
NOP56-220ENST00000616692 POTEAQ6S8J7 498 aa20.21■□□□□ 0.83
NOP56-220ENST00000616692 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
NOP56-220ENST00000616692 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
NOP56-220ENST00000616692 FBXO3Q9UK99 471 aa20.21■□□□□ 0.83
NOP56-220ENST00000616692 CDK11BP21127 795 aaKnown RBP20.2■□□□□ 0.82
NOP56-220ENST00000616692 C19orf44Q9H6X5 657 aa20.2■□□□□ 0.82
NOP56-220ENST00000616692 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
NOP56-220ENST00000616692 PNNQ9H307 717 aaKnown RBP20.2■□□□□ 0.82
NOP56-220ENST00000616692 LAS1LQ9Y4W2 734 aaKnown RBP20.2■□□□□ 0.82
NOP56-220ENST00000616692 ZNF830Q96NB3 372 aaPredicted RBP20.19■□□□□ 0.82
NOP56-220ENST00000616692 SETBP1Q9Y6X0 1596 aa20.18■□□□□ 0.82
NOP56-220ENST00000616692 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.18■□□□□ 0.82
NOP56-220ENST00000616692 PLCD3Q8N3E9 789 aa20.18■□□□□ 0.82
NOP56-220ENST00000616692 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
NOP56-220ENST00000616692 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
NOP56-220ENST00000616692 PPP4R2Q9NY27 417 aa20.16■□□□□ 0.82
NOP56-220ENST00000616692 DCAF11Q8TEB1 546 aa20.16■□□□□ 0.82
NOP56-220ENST00000616692 ZNF772Q68DY9 489 aaPredicted RBP20.15■□□□□ 0.82
NOP56-220ENST00000616692 XRN1Q8IZH2 1706 aaKnown RBP20.15■□□□□ 0.82
NOP56-220ENST00000616692 ATF3P18847 181 aa20.15■□□□□ 0.82
NOP56-220ENST00000616692 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.82
NOP56-220ENST00000616692 CNPY4Q8N129 248 aa20.13■□□□□ 0.81
NOP56-220ENST00000616692 TMEM51Q9NW97 253 aa20.13■□□□□ 0.81
NOP56-220ENST00000616692 NUP155O75694 1391 aa20.11■□□□□ 0.81
NOP56-220ENST00000616692 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
NOP56-220ENST00000616692 KCNA4P22459 653 aa20.1■□□□□ 0.81
NOP56-220ENST00000616692 SPHKAPQ2M3C7 1700 aa20.1■□□□□ 0.81
NOP56-220ENST00000616692 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
NOP56-220ENST00000616692 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
NOP56-220ENST00000616692 LRP6O75581 1613 aa20.09■□□□□ 0.81
NOP56-220ENST00000616692 PTPRUQ92729 1446 aa20.09■□□□□ 0.81
NOP56-220ENST00000616692 AMOTL2Q9Y2J4 779 aa20.08■□□□□ 0.81
NOP56-220ENST00000616692 NHSL1Q5SYE7 1610 aa20.08■□□□□ 0.8
NOP56-220ENST00000616692 CHGAP10645 457 aaKnown RBP20.07■□□□□ 0.8
NOP56-220ENST00000616692 SMAP1Q8IYB5 467 aaPredicted RBP20.07■□□□□ 0.8
NOP56-220ENST00000616692 PRAG1Q86YV5 1406 aa20.07■□□□□ 0.8
NOP56-220ENST00000616692 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
NOP56-220ENST00000616692 CLCN1P35523 988 aa20.05■□□□□ 0.8
NOP56-220ENST00000616692 LAMC1P11047 1609 aa20.05■□□□□ 0.8
NOP56-220ENST00000616692 MST1RQ04912 1400 aa20.04■□□□□ 0.8
NOP56-220ENST00000616692 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
NOP56-220ENST00000616692 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
NOP56-220ENST00000616692 MEX3CQ5U5Q3 659 aaKnown RBP20.04■□□□□ 0.8
NOP56-220ENST00000616692 ADGRL3Q9HAR2 1447 aa20.04■□□□□ 0.8
NOP56-220ENST00000616692 KCNG1Q9UIX4 513 aa20.03■□□□□ 0.8
NOP56-220ENST00000616692 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.8
NOP56-220ENST00000616692 ZHX1Q9UKY1 873 aaPredicted RBP20.01■□□□□ 0.79
NOP56-220ENST00000616692 NEXMIFQ5QGS0 1516 aa20■□□□□ 0.79
NOP56-220ENST00000616692 VGLL3A8MV65 326 aa20■□□□□ 0.79
NOP56-220ENST00000616692 VGFO15240 615 aaPredicted RBP20■□□□□ 0.79
NOP56-220ENST00000616692 TPM2P07951 284 aa20■□□□□ 0.79
NOP56-220ENST00000616692 LRRC59Q96AG4 307 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms