RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 NEK4P51957 841 aa12.72□□□□□ -0.37
TPT1-214ENST00000616577 G3BP1Q13283 466 aaKnown RBP eCLIP12.72□□□□□ -0.37
TPT1-214ENST00000616577 C9orf84Q5VXU9 1444 aa12.72□□□□□ -0.37
TPT1-214ENST00000616577 PES1O00541 588 aaKnown RBP12.72□□□□□ -0.37
TPT1-214ENST00000616577 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
TPT1-214ENST00000616577 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
TPT1-214ENST00000616577 R3HCC1Q9Y3T6 440 aaKnown RBP12.72□□□□□ -0.37
TPT1-214ENST00000616577 TPM3P06753 285 aa12.71□□□□□ -0.37
TPT1-214ENST00000616577 FOSBP53539 338 aa12.71□□□□□ -0.38
TPT1-214ENST00000616577 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.38
TPT1-214ENST00000616577 RNF20Q5VTR2 975 aa12.71□□□□□ -0.38
TPT1-214ENST00000616577 C20orf194Q5TEA3 1177 aa12.71□□□□□ -0.38
TPT1-214ENST00000616577 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
TPT1-214ENST00000616577 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
TPT1-214ENST00000616577 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
TPT1-214ENST00000616577 NUTM2GQ5VZR2 741 aa12.7□□□□□ -0.38
TPT1-214ENST00000616577 TTC5Q8N0Z6 440 aa12.7□□□□□ -0.38
TPT1-214ENST00000616577 NOC3LQ8WTT2 800 aaKnown RBP12.7□□□□□ -0.38
TPT1-214ENST00000616577 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
TPT1-214ENST00000616577 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
TPT1-214ENST00000616577 CPLX1O14810 134 aa12.69□□□□□ -0.38
TPT1-214ENST00000616577 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
TPT1-214ENST00000616577 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
TPT1-214ENST00000616577 CPLX2Q6PUV4 134 aaKnown RBP12.69□□□□□ -0.38
TPT1-214ENST00000616577 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
TPT1-214ENST00000616577 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
TPT1-214ENST00000616577 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
TPT1-214ENST00000616577 DAPK1P53355 1430 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 SURF6O75683 361 aaKnown RBP12.68□□□□□ -0.38
TPT1-214ENST00000616577 DDX58O95786 925 aaKnown RBP12.68□□□□□ -0.38
TPT1-214ENST00000616577 MVPQ14764 893 aaKnown RBP12.68□□□□□ -0.38
TPT1-214ENST00000616577 TPD52L1Q16890 204 aaPredicted RBP12.68□□□□□ -0.38
TPT1-214ENST00000616577 ARHGAP5Q13017 1502 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 ERC2O15083 957 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 AIMP1Q12904 312 aaKnown RBP12.68□□□□□ -0.38
TPT1-214ENST00000616577 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.68□□□□□ -0.38
TPT1-214ENST00000616577 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 SLFN5Q08AF3 891 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 RABEP1Q15276 862 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
TPT1-214ENST00000616577 APPP05067 770 aa12.67□□□□□ -0.38
TPT1-214ENST00000616577 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
TPT1-214ENST00000616577 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
TPT1-214ENST00000616577 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
TPT1-214ENST00000616577 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
TPT1-214ENST00000616577 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
TPT1-214ENST00000616577 IFT57Q9NWB7 429 aa12.67□□□□□ -0.38
TPT1-214ENST00000616577 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
TPT1-214ENST00000616577 NESP48681 1621 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 NLRP6P59044 892 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 PSME1Q06323 249 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 GNAI3P08754 354 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
TPT1-214ENST00000616577 MBD3O95983 291 aa12.65□□□□□ -0.38
TPT1-214ENST00000616577 MCM4P33991 863 aa12.65□□□□□ -0.38
TPT1-214ENST00000616577 PDE4CQ08493 712 aa12.65□□□□□ -0.38
TPT1-214ENST00000616577 LRRFIP1Q32MZ4 808 aaKnown RBP12.65□□□□□ -0.38
TPT1-214ENST00000616577 ZNF771Q7L3S4 317 aaPredicted RBP12.65□□□□□ -0.38
TPT1-214ENST00000616577 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
TPT1-214ENST00000616577 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
TPT1-214ENST00000616577 CABP1Q9NZU7 370 aa12.65□□□□□ -0.38
TPT1-214ENST00000616577 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.39
TPT1-214ENST00000616577 FIBPO43427 364 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 TRIM29Q14134 588 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 MPNDQ8N594 471 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 CCDC39Q9UFE4 941 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
TPT1-214ENST00000616577 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
TPT1-214ENST00000616577 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 CHD1LQ86WJ1 897 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 K7ELQ4 463 aaPredicted RBP12.63□□□□□ -0.39
TPT1-214ENST00000616577 TRDNQ13061 729 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.63□□□□□ -0.39
TPT1-214ENST00000616577 MARCH6O60337 910 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
TPT1-214ENST00000616577 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
TPT1-214ENST00000616577 FSD1Q9BTV5 496 aa12.62□□□□□ -0.39
TPT1-214ENST00000616577 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
TPT1-214ENST00000616577 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
TPT1-214ENST00000616577 TPM1P09493 284 aa12.62□□□□□ -0.39
TPT1-214ENST00000616577 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
TPT1-214ENST00000616577 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 GNAI2P04899 355 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
TPT1-214ENST00000616577 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 SDF4Q9BRK5 362 aa12.61□□□□□ -0.39
TPT1-214ENST00000616577 MCM2P49736 904 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms