RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 LMTK2Q8IWU2 1503 aa18.12■□□□□ 0.49
CACNA1C-231ENST00000616390 PPLO60437 1756 aa18.12■□□□□ 0.49
CACNA1C-231ENST00000616390 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
CACNA1C-231ENST00000616390 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.11■□□□□ 0.49
CACNA1C-231ENST00000616390 NRXN1Q9ULB1 1477 aa18.11■□□□□ 0.49
CACNA1C-231ENST00000616390 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
CACNA1C-231ENST00000616390 ABCC3O15438 1527 aa18.1■□□□□ 0.49
CACNA1C-231ENST00000616390 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
CACNA1C-231ENST00000616390 MTHFSP49914 203 aa18.1■□□□□ 0.49
CACNA1C-231ENST00000616390 CFAP74Q9C0B2 1584 aa18.1■□□□□ 0.49
CACNA1C-231ENST00000616390 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
CACNA1C-231ENST00000616390 SRPK2P78362 688 aaKnown RBP18.08■□□□□ 0.49
CACNA1C-231ENST00000616390 BACH2Q9BYV9 841 aa18.08■□□□□ 0.48
CACNA1C-231ENST00000616390 YEATS2Q9ULM3 1422 aa18.08■□□□□ 0.48
CACNA1C-231ENST00000616390 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
CACNA1C-231ENST00000616390 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
CACNA1C-231ENST00000616390 RPGRIP1LQ68CZ1 1315 aa18.07■□□□□ 0.48
CACNA1C-231ENST00000616390 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
CACNA1C-231ENST00000616390 E9PSI1 815 aa18.07■□□□□ 0.48
CACNA1C-231ENST00000616390 RGS3P49796 1198 aa18.07■□□□□ 0.48
CACNA1C-231ENST00000616390 WWC1Q8IX03 1113 aa18.07■□□□□ 0.48
CACNA1C-231ENST00000616390 CAMSAP1Q5T5Y3 1602 aa18.06■□□□□ 0.48
CACNA1C-231ENST00000616390 MINK1Q8N4C8 1332 aaPredicted RBP18.06■□□□□ 0.48
CACNA1C-231ENST00000616390 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
CACNA1C-231ENST00000616390 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
CACNA1C-231ENST00000616390 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
CACNA1C-231ENST00000616390 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
CACNA1C-231ENST00000616390 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
CACNA1C-231ENST00000616390 TCP11L2Q8N4U5 519 aa18.05■□□□□ 0.48
CACNA1C-231ENST00000616390 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
CACNA1C-231ENST00000616390 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
CACNA1C-231ENST00000616390 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
CACNA1C-231ENST00000616390 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
CACNA1C-231ENST00000616390 MLECQ14165 292 aa18.04■□□□□ 0.48
CACNA1C-231ENST00000616390 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
CACNA1C-231ENST00000616390 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.48
CACNA1C-231ENST00000616390 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
CACNA1C-231ENST00000616390 GGNBP2Q9H3C7 697 aa18.03■□□□□ 0.48
CACNA1C-231ENST00000616390 POGKQ9P215 609 aa18.03■□□□□ 0.48
CACNA1C-231ENST00000616390 POLR3AO14802 1390 aaPredicted RBP18.03■□□□□ 0.48
CACNA1C-231ENST00000616390 MS4A1P11836 297 aa18.02■□□□□ 0.48
CACNA1C-231ENST00000616390 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.48
CACNA1C-231ENST00000616390 GLI2P10070 1586 aa18.02■□□□□ 0.48
CACNA1C-231ENST00000616390 PANK1Q8TE04 598 aa18.02■□□□□ 0.47
CACNA1C-231ENST00000616390 RUNDC1Q96C34 613 aa18.02■□□□□ 0.47
CACNA1C-231ENST00000616390 CFAP53Q96M91 514 aa18.02■□□□□ 0.47
CACNA1C-231ENST00000616390 DIP2CQ9Y2E4 1556 aa18.02■□□□□ 0.47
CACNA1C-231ENST00000616390 MYO5BQ9ULV0 1848 aa18.01■□□□□ 0.47
CACNA1C-231ENST00000616390 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
CACNA1C-231ENST00000616390 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
CACNA1C-231ENST00000616390 NEO1Q92859 1461 aa18■□□□□ 0.47
CACNA1C-231ENST00000616390 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
CACNA1C-231ENST00000616390 PRAM1Q96QH2 718 aa18■□□□□ 0.47
CACNA1C-231ENST00000616390 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
CACNA1C-231ENST00000616390 ZC3H13Q5T200 1668 aaKnown RBP18■□□□□ 0.47
CACNA1C-231ENST00000616390 LAS1LQ9Y4W2 734 aaKnown RBP17.99■□□□□ 0.47
CACNA1C-231ENST00000616390 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
CACNA1C-231ENST00000616390 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
CACNA1C-231ENST00000616390 TSPOAP1O95153 1857 aa17.97■□□□□ 0.47
CACNA1C-231ENST00000616390 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
CACNA1C-231ENST00000616390 CLUAP1Q96AJ1 413 aa17.96■□□□□ 0.47
CACNA1C-231ENST00000616390 TNNQ9UQP3 1299 aa17.96■□□□□ 0.47
CACNA1C-231ENST00000616390 ARHGEF28Q8N1W1 1705 aaKnown RBP17.96■□□□□ 0.47
CACNA1C-231ENST00000616390 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
CACNA1C-231ENST00000616390 ANKRD36BQ8N2N9 1353 aa17.95■□□□□ 0.46
CACNA1C-231ENST00000616390 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
CACNA1C-231ENST00000616390 IGHDP01880 384 aa17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 PPM1GO15355 546 aaPredicted RBP17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 FBLN1P23142 703 aa17.94■□□□□ 0.46
CACNA1C-231ENST00000616390 FGD1P98174 961 aa17.93■□□□□ 0.46
CACNA1C-231ENST00000616390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.92■□□□□ 0.46
CACNA1C-231ENST00000616390 DEKP35659 375 aaKnown RBP17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 WAPLQ7Z5K2 1190 aa17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 HOMEZQ8IX15 550 aa17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 CABP1Q9NZU7 370 aa17.91■□□□□ 0.46
CACNA1C-231ENST00000616390 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
CACNA1C-231ENST00000616390 CDK19Q9BWU1 502 aa17.9■□□□□ 0.46
CACNA1C-231ENST00000616390 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
CACNA1C-231ENST00000616390 FYB1O15117 783 aa17.89■□□□□ 0.45
CACNA1C-231ENST00000616390 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.45
CACNA1C-231ENST00000616390 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
CACNA1C-231ENST00000616390 RLBP1P12271 317 aa17.88■□□□□ 0.45
CACNA1C-231ENST00000616390 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
CACNA1C-231ENST00000616390 ARHGAP31Q2M1Z3 1444 aa17.88■□□□□ 0.45
CACNA1C-231ENST00000616390 PDE3AQ14432 1141 aa17.87■□□□□ 0.45
CACNA1C-231ENST00000616390 YTHDC2Q9H6S0 1430 aaKnown RBP17.87■□□□□ 0.45
CACNA1C-231ENST00000616390 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
CACNA1C-231ENST00000616390 C8orf34Q49A92 452 aa17.86■□□□□ 0.45
CACNA1C-231ENST00000616390 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
CACNA1C-231ENST00000616390 TMEM131LA2VDJ0 1609 aa17.85■□□□□ 0.45
CACNA1C-231ENST00000616390 MAPK8IP3Q9UPT6 1336 aa17.85■□□□□ 0.45
CACNA1C-231ENST00000616390 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
CACNA1C-231ENST00000616390 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms