RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 NAIPQ13075 1403 aa16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 TNNT1P13805 278 aa16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 ZSCAN20P17040 1043 aaPredicted RBP16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 SLFN5Q08AF3 891 aa16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
PPP4R3B-205ENST00000616288 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 GTF2A1P52655 376 aaPredicted RBP16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
PPP4R3B-205ENST00000616288 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
PPP4R3B-205ENST00000616288 GOLGA6L19H0YKK7 550 aa16.4■□□□□ 0.22
PPP4R3B-205ENST00000616288 ZBTB9Q96C00 473 aa16.4■□□□□ 0.22
PPP4R3B-205ENST00000616288 ARGLU1Q9NWB6 273 aaPredicted RBP16.4■□□□□ 0.22
PPP4R3B-205ENST00000616288 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 ADCY5O95622 1261 aa16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 DEF6Q9H4E7 631 aa16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 NUP155O75694 1391 aa16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 TPM3P06753 285 aa16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
PPP4R3B-205ENST00000616288 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 RABEP1Q15276 862 aa16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 LRSAM1Q6UWE0 723 aa16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 OGFRQ9NZT2 677 aa16.38■□□□□ 0.21
PPP4R3B-205ENST00000616288 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 NEK4P51957 841 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 BECN2A8MW95 431 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 FIBPO43427 364 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 CDC45O75419 566 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
PPP4R3B-205ENST00000616288 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3B-205ENST00000616288 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
PPP4R3B-205ENST00000616288 TMEM51Q9NW97 253 aa16.36■□□□□ 0.21
PPP4R3B-205ENST00000616288 SETQ01105 290 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3B-205ENST00000616288 FEZ1Q99689 392 aa16.35■□□□□ 0.21
PPP4R3B-205ENST00000616288 C10orf67Q8IYJ2 551 aa16.35■□□□□ 0.21
PPP4R3B-205ENST00000616288 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 RIOK3O14730 519 aaKnown RBP16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 REC8O95072 547 aa16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 GAS2L2Q8NHY3 880 aa16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 PTPRKQ15262 1439 aa16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
PPP4R3B-205ENST00000616288 LEKR1Q6ZMV7 388 aa16.33■□□□□ 0.21
PPP4R3B-205ENST00000616288 FBXW7Q969H0 707 aa16.33■□□□□ 0.2
PPP4R3B-205ENST00000616288 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
PPP4R3B-205ENST00000616288 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
PPP4R3B-205ENST00000616288 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
PPP4R3B-205ENST00000616288 MVPQ14764 893 aaKnown RBP16.32■□□□□ 0.2
PPP4R3B-205ENST00000616288 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
PPP4R3B-205ENST00000616288 SMC5Q8IY18 1101 aa16.32■□□□□ 0.2
PPP4R3B-205ENST00000616288 TPM4P67936 248 aa16.31■□□□□ 0.2
PPP4R3B-205ENST00000616288 VPS37CA5D8V6 355 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3B-205ENST00000616288 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
PPP4R3B-205ENST00000616288 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
PPP4R3B-205ENST00000616288 AK7Q96M32 723 aa16.31■□□□□ 0.2
PPP4R3B-205ENST00000616288 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
PPP4R3B-205ENST00000616288 HAP1P54257 671 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3B-205ENST00000616288 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
PPP4R3B-205ENST00000616288 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3B-205ENST00000616288 CHD1LQ86WJ1 897 aa16.28■□□□□ 0.2
PPP4R3B-205ENST00000616288 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
PPP4R3B-205ENST00000616288 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
PPP4R3B-205ENST00000616288 FBLN2P98095 1184 aa16.28■□□□□ 0.2
PPP4R3B-205ENST00000616288 ANKRD30AQ9BXX3 1397 aa16.27■□□□□ 0.2
PPP4R3B-205ENST00000616288 PIBF1Q8WXW3 757 aa16.27■□□□□ 0.2
PPP4R3B-205ENST00000616288 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
PPP4R3B-205ENST00000616288 RASSF4Q9H2L5 321 aa16.27■□□□□ 0.2
PPP4R3B-205ENST00000616288 ZNF445P59923 1031 aa16.27■□□□□ 0.19
PPP4R3B-205ENST00000616288 FILIP1Q7Z7B0 1213 aa16.27■□□□□ 0.19
PPP4R3B-205ENST00000616288 TRMT1Q9NXH9 659 aaKnown RBP16.26■□□□□ 0.19
PPP4R3B-205ENST00000616288 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
PPP4R3B-205ENST00000616288 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
PPP4R3B-205ENST00000616288 SNX21Q969T3 373 aa16.26■□□□□ 0.19
PPP4R3B-205ENST00000616288 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
PPP4R3B-205ENST00000616288 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
PPP4R3B-205ENST00000616288 CCDC192P0DO97 292 aa16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 GTF3C6Q969F1 213 aa16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 PTPN23Q9H3S7 1636 aa16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 IRX5P78411 483 aaPredicted RBP16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
PPP4R3B-205ENST00000616288 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms