RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 IPO7O95373 1038 aaKnown RBP11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 RUFY1Q96T51 708 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 ROCK1Q13464 1354 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 KIF21BO75037 1637 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 FIBPO43427 364 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 RNF20Q5VTR2 975 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 ZNF644Q9H582 1327 aaPredicted RBP11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 NAP1L1P55209 391 aaKnown RBP11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
SH3GLB1-205ENST00000616170 SMC2O95347 1197 aa11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 PODXL2Q9NZ53 605 aa11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 NFXL1Q6ZNB6 911 aa11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 CEBPZQ03701 1054 aaKnown RBP11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 HSP90B2PQ58FF3 399 aa11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 FMNL2Q96PY5 1086 aa11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 C1orf141Q5JVX7 400 aa11.23□□□□□ -0.61
SH3GLB1-205ENST00000616170 AK7Q96M32 723 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 ANKRD20A12PQ8NF67 263 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 TEFQ10587 303 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
SH3GLB1-205ENST00000616170 CCDC66A2RUB6 948 aa11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 G3BP1Q13283 466 aaKnown RBP eCLIP11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 CPLX2Q6PUV4 134 aaKnown RBP11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 HOOK1Q9UJC3 728 aaKnown RBP11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 ESPNB1AK53 854 aa11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 TSR2Q969E8 191 aaKnown RBP11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
SH3GLB1-205ENST00000616170 PPP2R1AP30153 589 aa11.21□□□□□ -0.62
SH3GLB1-205ENST00000616170 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.62
SH3GLB1-205ENST00000616170 RAD21O60216 631 aa11.21□□□□□ -0.62
SH3GLB1-205ENST00000616170 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.62
SH3GLB1-205ENST00000616170 WDR97A6NE52 1622 aa11.21□□□□□ -0.62
SH3GLB1-205ENST00000616170 CHMP4CQ96CF2 233 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 MBD3O95983 291 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 RRP9O43818 475 aaKnown RBP11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 NAT10Q9H0A0 1025 aaKnown RBP11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 MCM4P33991 863 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 GNAI1P63096 354 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 ACBD3Q9H3P7 528 aa11.2□□□□□ -0.62
SH3GLB1-205ENST00000616170 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 RSPH4AQ5TD94 716 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 OLFM4Q6UX06 510 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 CWC15Q9P013 229 aaKnown RBP11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 H0YHG0 523 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 MTHFSP49914 203 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 TRDNQ13061 729 aa11.19□□□□□ -0.62
SH3GLB1-205ENST00000616170 RABEP1Q15276 862 aa11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 ERC2O15083 957 aa11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 G3V3G9 751 aa11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 AIMP1Q12904 312 aaKnown RBP11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
SH3GLB1-205ENST00000616170 STK3Q13188 491 aa11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 NEUROD6Q96NK8 337 aa11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 FAM177A1Q8N128 213 aaPredicted RBP11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 AAMPQ13685 434 aa11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 NINLQ9Y2I6 1382 aa11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
SH3GLB1-205ENST00000616170 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 MYOM3Q5VTT5 1437 aa11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 CBX1P83916 185 aa11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 NBPF8Q3BBV2 869 aa11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 LEKR1Q6ZMV7 388 aa11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 CCDC47Q96A33 483 aaKnown RBP11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 KINO60870 393 aaKnown RBP11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 FSD1Q9BTV5 496 aa11.16□□□□□ -0.62
SH3GLB1-205ENST00000616170 DHX16O60231 1041 aaKnown RBP11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 LRRFIP1Q32MZ4 808 aaKnown RBP11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 TTC5Q8N0Z6 440 aa11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 TMEM132EQ6IEE7 984 aa11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 SYCE3A1L190 88 aa11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 CALRP27797 417 aaKnown RBP11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 CCDC112Q8NEF3 446 aa11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
SH3GLB1-205ENST00000616170 ATP2B1P20020 1258 aa11.15□□□□□ -0.63
SH3GLB1-205ENST00000616170 PSMA5P28066 241 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms