RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 H3BQV1 296 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 RNF20Q5VTR2 975 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 CFAP70Q5T0N1 1121 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
SPTBN1-207ENST00000615901 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
SPTBN1-207ENST00000615901 G3BP1Q13283 466 aaKnown RBP eCLIP11.16□□□□□ -0.628e-13■■□□□ 13.2
SPTBN1-207ENST00000615901 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
SPTBN1-207ENST00000615901 G3V3G9 751 aa11.16□□□□□ -0.62
SPTBN1-207ENST00000615901 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
SPTBN1-207ENST00000615901 RAPGEF4Q8WZA2 1011 aa11.15□□□□□ -0.62
SPTBN1-207ENST00000615901 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
SPTBN1-207ENST00000615901 TMEM132EQ6IEE7 984 aa11.15□□□□□ -0.62
SPTBN1-207ENST00000615901 RASSF8Q8NHQ8 419 aa11.15□□□□□ -0.62
SPTBN1-207ENST00000615901 EIF2S2P20042 333 aaKnown RBP11.15□□□□□ -0.62
SPTBN1-207ENST00000615901 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.63
SPTBN1-207ENST00000615901 GGNBP2Q9H3C7 697 aa11.15□□□□□ -0.63
SPTBN1-207ENST00000615901 AMOTL1Q8IY63 956 aa11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 TOMM22Q9NS69 142 aa11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 KIAA0556O60303 1618 aa11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 MTHFSP49914 203 aa11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 CDC45O75419 566 aa11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 NOL10Q9BSC4 688 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-207ENST00000615901 TCP11L2Q8N4U5 519 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 HMOX1P09601 288 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 PDE3AQ14432 1141 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 NCOA1Q15788 1441 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 CD109Q6YHK3 1445 aa11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
SPTBN1-207ENST00000615901 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 ANO2Q9NQ90 1003 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 SF3A1Q15459 793 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 NBPF1Q3BBV0 1214 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 GNAI3P08754 354 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 UBTFL1P0CB47 393 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-207ENST00000615901 NLRP6P59044 892 aa11.11□□□□□ -0.63
SPTBN1-207ENST00000615901 PANK1Q8TE04 598 aa11.11□□□□□ -0.63
SPTBN1-207ENST00000615901 FANCAO15360 1455 aa11.11□□□□□ -0.63
SPTBN1-207ENST00000615901 TXNDC2Q86VQ3 553 aa11.11□□□□□ -0.63
SPTBN1-207ENST00000615901 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 CDK19Q9BWU1 502 aa11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 NLRP2Q9NX02 1062 aa11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 WDR62O43379 1518 aa11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 NUCB2P80303 420 aa11.1□□□□□ -0.63
SPTBN1-207ENST00000615901 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 NSD2O96028 1365 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 CHMP5Q9NZZ3 219 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 ABTB2Q8N961 1025 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 SCAF11Q99590 1463 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 TRIM29Q14134 588 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 ERC1Q8IUD2 1116 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 GSE1Q14687 1217 aa11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-207ENST00000615901 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 HOOK1Q9UJC3 728 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 HIP1O00291 1037 aa11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 CPLX1O14810 134 aa11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 TRDNQ13061 729 aa11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 VPS37DQ86XT2 251 aa11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
SPTBN1-207ENST00000615901 GPATCH8Q9UKJ3 1502 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 TPM3P06753 285 aa11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 CCT4P50991 539 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 CNTROBQ8N137 903 aa11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 TPM2P07951 284 aa11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 GOLGA6L19H0YKK7 550 aa11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 RIC3Q7Z5B4 369 aa11.07□□□□□ -0.64
SPTBN1-207ENST00000615901 ABCC11Q96J66 1382 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 TPM1P09493 284 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 PSMA5P28066 241 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 MCTP1Q6DN14 999 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 NUP160Q12769 1436 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 GON4LQ3T8J9 2241 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms