RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 MPHOSPH10O00566 681 aaKnown RBP11.18□□□□□ -0.62
COL12A1-211ENST00000615798 SARNPP82979 210 aaKnown RBP11.18□□□□□ -0.62
COL12A1-211ENST00000615798 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
COL12A1-211ENST00000615798 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
COL12A1-211ENST00000615798 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
COL12A1-211ENST00000615798 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-211ENST00000615798 NINLQ9Y2I6 1382 aa11.17□□□□□ -0.62
COL12A1-211ENST00000615798 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
COL12A1-211ENST00000615798 CCDC146Q8IYE0 955 aa11.17□□□□□ -0.62
COL12A1-211ENST00000615798 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-211ENST00000615798 STK31Q9BXU1 1019 aa11.17□□□□□ -0.62
COL12A1-211ENST00000615798 SEPT7Q16181 437 aaKnown RBP11.17□□□□□ -0.62
COL12A1-211ENST00000615798 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
COL12A1-211ENST00000615798 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 CTR9Q6PD62 1173 aa11.16□□□□□ -0.62
COL12A1-211ENST00000615798 POGKQ9P215 609 aa11.16□□□□□ -0.62
COL12A1-211ENST00000615798 E9PSI1 815 aa11.16□□□□□ -0.62
COL12A1-211ENST00000615798 DZIP1Q86YF9 867 aaKnown RBP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 RBM10P98175 930 aaKnown RBP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 ISY1Q9ULR0 285 aaKnown RBP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 MRVI1Q9Y6F6 885 aa11.16□□□□□ -0.62
COL12A1-211ENST00000615798 GBP2P32456 591 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL12A1-211ENST00000615798 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
COL12A1-211ENST00000615798 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-211ENST00000615798 ANKRD50Q9ULJ7 1429 aa11.15□□□□□ -0.62
COL12A1-211ENST00000615798 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-211ENST00000615798 IFT140Q96RY7 1462 aa11.15□□□□□ -0.62
COL12A1-211ENST00000615798 TCHPQ9BT92 498 aa11.15□□□□□ -0.62
COL12A1-211ENST00000615798 TIGD1Q96MW7 591 aa11.15□□□□□ -0.62
COL12A1-211ENST00000615798 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.63
COL12A1-211ENST00000615798 TOPBP1Q92547 1522 aa11.15□□□□□ -0.63
COL12A1-211ENST00000615798 LUZP1Q86V48 1076 aa11.14□□□□□ -0.63
COL12A1-211ENST00000615798 UQCRHLA0A096LP55 91 aa11.14□□□□□ -0.63
COL12A1-211ENST00000615798 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
COL12A1-211ENST00000615798 UQCRHP07919 91 aa11.14□□□□□ -0.63
COL12A1-211ENST00000615798 MRE11P49959 708 aa11.14□□□□□ -0.63
COL12A1-211ENST00000615798 NAP1L1P55209 391 aaKnown RBP11.14□□□□□ -0.63
COL12A1-211ENST00000615798 DHX8Q14562 1220 aaKnown RBP11.14□□□□□ -0.63
COL12A1-211ENST00000615798 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-211ENST00000615798 ERLIN1O75477 346 aa11.14□□□□□ -0.63
COL12A1-211ENST00000615798 BICRAQ9NZM4 1560 aa11.13□□□□□ -0.63
COL12A1-211ENST00000615798 PPM1EQ8WY54 764 aa11.13□□□□□ -0.63
COL12A1-211ENST00000615798 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
COL12A1-211ENST00000615798 CGNQ9P2M7 1197 aaKnown RBP11.13□□□□□ -0.63
COL12A1-211ENST00000615798 SYNJ2O15056 1496 aa11.13□□□□□ -0.63
COL12A1-211ENST00000615798 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-211ENST00000615798 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-211ENST00000615798 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
COL12A1-211ENST00000615798 ZMYND15Q9H091 742 aa11.12□□□□□ -0.63
COL12A1-211ENST00000615798 H3BQV1 296 aa11.12□□□□□ -0.63
COL12A1-211ENST00000615798 RRP1P56182 461 aaKnown RBP11.12□□□□□ -0.63
COL12A1-211ENST00000615798 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
COL12A1-211ENST00000615798 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
COL12A1-211ENST00000615798 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
COL12A1-211ENST00000615798 MIPOL1Q8TD10 442 aa11.11□□□□□ -0.63
COL12A1-211ENST00000615798 PTPRGP23470 1445 aa11.11□□□□□ -0.63
COL12A1-211ENST00000615798 CCDC91Q7Z6B0 441 aa11.11□□□□□ -0.63
COL12A1-211ENST00000615798 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
COL12A1-211ENST00000615798 KIF3CO14782 793 aa11.11□□□□□ -0.63
COL12A1-211ENST00000615798 LIG1P18858 919 aa11.11□□□□□ -0.63
COL12A1-211ENST00000615798 MFAP1P55081 439 aaKnown RBP11.11□□□□□ -0.63
COL12A1-211ENST00000615798 ODF2Q5BJF6 829 aa11.1□□□□□ -0.63
COL12A1-211ENST00000615798 KIAA1107Q9UPP5 1409 aa11.1□□□□□ -0.63
COL12A1-211ENST00000615798 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
COL12A1-211ENST00000615798 RNF168Q8IYW5 571 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-211ENST00000615798 FEZ1Q99689 392 aa11.1□□□□□ -0.63
COL12A1-211ENST00000615798 MRC2Q9UBG0 1479 aa11.1□□□□□ -0.63
COL12A1-211ENST00000615798 NAT10Q9H0A0 1025 aaKnown RBP11.1□□□□□ -0.63
COL12A1-211ENST00000615798 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-211ENST00000615798 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
COL12A1-211ENST00000615798 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
COL12A1-211ENST00000615798 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
COL12A1-211ENST00000615798 LRRCC1Q9C099 1032 aa11.09□□□□□ -0.63
COL12A1-211ENST00000615798 KIF21AQ7Z4S6 1674 aa11.09□□□□□ -0.63
COL12A1-211ENST00000615798 ZMAT2Q96NC0 199 aaKnown RBP11.09□□□□□ -0.63
COL12A1-211ENST00000615798 A0A0G2JS52 829 aa11.09□□□□□ -0.63
COL12A1-211ENST00000615798 MNAT1P51948 309 aa11.09□□□□□ -0.63
COL12A1-211ENST00000615798 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.63
COL12A1-211ENST00000615798 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
COL12A1-211ENST00000615798 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL12A1-211ENST00000615798 V9GYY5 206 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-211ENST00000615798 STAMBPO95630 424 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 SMC1AQ14683 1233 aaKnown RBP11.07□□□□□ -0.64
COL12A1-211ENST00000615798 RAD54L2Q9Y4B4 1467 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 SKIDA1Q1XH10 827 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 PDCL3Q9H2J4 239 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 ZNHIT6Q9NWK9 470 aaKnown RBP11.07□□□□□ -0.64
COL12A1-211ENST00000615798 GON4LQ3T8J9 2241 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 ST20-MTHFSA0A0A6YYL1 179 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 SASS6Q6UVJ0 657 aa11.07□□□□□ -0.64
COL12A1-211ENST00000615798 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 KIF7Q2M1P5 1343 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
COL12A1-211ENST00000615798 SMG6Q86US8 1419 aaKnown RBP11.06□□□□□ -0.64
COL12A1-211ENST00000615798 FAM193AP78312 1265 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms