RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-223ENST00000615442 CADPS2Q86UW7 1296 aa14.85□□□□□ -0.03
PVT1-223ENST00000615442 CENPJQ9HC77 1338 aaPredicted RBP14.85□□□□□ -0.03
PVT1-223ENST00000615442 SAFB2Q14151 953 aaKnown RBP eCLIP14.84□□□□□ -0.03
PVT1-223ENST00000615442 DCCP43146 1447 aa14.83□□□□□ -0.03
PVT1-223ENST00000615442 UBAP1LF5GYI3 381 aa14.82□□□□□ -0.04
PVT1-223ENST00000615442 XIRP1Q702N8 1843 aaKnown RBP14.81□□□□□ -0.04
PVT1-223ENST00000615442 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
PVT1-223ENST00000615442 SLAIN2Q9P270 581 aa14.81□□□□□ -0.04
PVT1-223ENST00000615442 MINK1Q8N4C8 1332 aaPredicted RBP14.81□□□□□ -0.04
PVT1-223ENST00000615442 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
PVT1-223ENST00000615442 USP47Q96K76 1375 aa14.8□□□□□ -0.04
PVT1-223ENST00000615442 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.8□□□□□ -0.04
PVT1-223ENST00000615442 ST20-MTHFSA0A0A6YYL1 179 aa14.79□□□□□ -0.04
PVT1-223ENST00000615442 WASLO00401 505 aaPredicted RBP14.79□□□□□ -0.04
PVT1-223ENST00000615442 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.04
PVT1-223ENST00000615442 HIRIP3Q9BW71 556 aaPredicted RBP14.79□□□□□ -0.04
PVT1-223ENST00000615442 SBNO2Q9Y2G9 1366 aa14.79□□□□□ -0.04
PVT1-223ENST00000615442 NALCNQ8IZF0 1738 aa14.78□□□□□ -0.04
PVT1-223ENST00000615442 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.04
PVT1-223ENST00000615442 CDK19Q9BWU1 502 aa14.77□□□□□ -0.05
PVT1-223ENST00000615442 ADGRB2O60241 1585 aa14.77□□□□□ -0.05
PVT1-223ENST00000615442 EVC2Q86UK5 1308 aa14.76□□□□□ -0.05
PVT1-223ENST00000615442 FBXO41Q8TF61 875 aa14.76□□□□□ -0.05
PVT1-223ENST00000615442 TESK2Q96S53 571 aa14.76□□□□□ -0.05
PVT1-223ENST00000615442 MST1RQ04912 1400 aa14.75□□□□□ -0.05
PVT1-223ENST00000615442 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
PVT1-223ENST00000615442 C1orf167Q5SNV9 1468 aa14.74□□□□□ -0.05
PVT1-223ENST00000615442 PIP4K2BP78356 416 aa14.73□□□□□ -0.05
PVT1-223ENST00000615442 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
PVT1-223ENST00000615442 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
PVT1-223ENST00000615442 ANKARQ7Z5J8 1434 aa14.73□□□□□ -0.05
PVT1-223ENST00000615442 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
PVT1-223ENST00000615442 NUTM2FA1L443 756 aa14.72□□□□□ -0.05
PVT1-223ENST00000615442 TMF1P82094 1093 aa14.72□□□□□ -0.05
PVT1-223ENST00000615442 NUDT16Q96DE0 195 aaKnown RBP14.72□□□□□ -0.05
PVT1-223ENST00000615442 ESCO1Q5FWF5 840 aa14.71□□□□□ -0.05
PVT1-223ENST00000615442 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
PVT1-223ENST00000615442 ORAI2Q96SN7 254 aa14.71□□□□□ -0.05
PVT1-223ENST00000615442 CABP2Q9NPB3 220 aa14.71□□□□□ -0.05
PVT1-223ENST00000615442 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.05
PVT1-223ENST00000615442 TULP4Q9NRJ4 1543 aa14.71□□□□□ -0.06
PVT1-223ENST00000615442 PRR36Q9H6K5 1346 aa14.7□□□□□ -0.06
PVT1-223ENST00000615442 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
PVT1-223ENST00000615442 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
PVT1-223ENST00000615442 FMN2Q9NZ56 1722 aa14.69□□□□□ -0.06
PVT1-223ENST00000615442 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
PVT1-223ENST00000615442 PLEKHG3A1L390 1219 aa14.67□□□□□ -0.06
PVT1-223ENST00000615442 ATAD2Q6PL18 1390 aa14.67□□□□□ -0.06
PVT1-223ENST00000615442 ATP7BP35670 1465 aa14.66□□□□□ -0.06
PVT1-223ENST00000615442 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
PVT1-223ENST00000615442 USP32Q8NFA0 1604 aa14.64□□□□□ -0.07
PVT1-223ENST00000615442 FOXO3O43524 673 aa14.64□□□□□ -0.07
PVT1-223ENST00000615442 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
PVT1-223ENST00000615442 CABP1Q9NZU7 370 aa14.64□□□□□ -0.07
PVT1-223ENST00000615442 ROBO1Q9Y6N7 1651 aa14.64□□□□□ -0.07
PVT1-223ENST00000615442 NPHP3Q7Z494 1330 aa14.64□□□□□ -0.07
PVT1-223ENST00000615442 NGDNQ8NEJ9 315 aaKnown RBP14.63□□□□□ -0.07
PVT1-223ENST00000615442 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
PVT1-223ENST00000615442 PSME1Q06323 249 aa14.62□□□□□ -0.07
PVT1-223ENST00000615442 SOS2Q07890 1332 aaPredicted RBP14.62□□□□□ -0.07
PVT1-223ENST00000615442 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
PVT1-223ENST00000615442 NINLQ9Y2I6 1382 aa14.61□□□□□ -0.07
PVT1-223ENST00000615442 HSPA1LP34931 641 aa14.61□□□□□ -0.07
PVT1-223ENST00000615442 KRT28Q7Z3Y7 464 aa14.61□□□□□ -0.07
PVT1-223ENST00000615442 TMC1Q8TDI8 760 aa14.61□□□□□ -0.07
PVT1-223ENST00000615442 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
PVT1-223ENST00000615442 ACEP12821 1306 aa14.61□□□□□ -0.07
PVT1-223ENST00000615442 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
PVT1-223ENST00000615442 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
PVT1-223ENST00000615442 DDX17Q92841 729 aaKnown RBP14.6□□□□□ -0.07
PVT1-223ENST00000615442 LRRC59Q96AG4 307 aaKnown RBP14.6□□□□□ -0.07
PVT1-223ENST00000615442 SLC12A5Q9H2X9 1139 aa14.6□□□□□ -0.07
PVT1-223ENST00000615442 KIF1AQ12756 1690 aa14.6□□□□□ -0.07
PVT1-223ENST00000615442 ILDR1Q86SU0 546 aaPredicted RBP14.59□□□□□ -0.07
PVT1-223ENST00000615442 TOPAZ1Q8N9V7 1692 aa14.58□□□□□ -0.07
PVT1-223ENST00000615442 TERF2IPQ9NYB0 399 aa14.58□□□□□ -0.08
PVT1-223ENST00000615442 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
PVT1-223ENST00000615442 RGPD8O14715 1765 aaPredicted RBP14.57□□□□□ -0.08
PVT1-223ENST00000615442 HDGFL2Q7Z4V5 671 aaPredicted RBP14.57□□□□□ -0.08
PVT1-223ENST00000615442 KIF7Q2M1P5 1343 aa14.57□□□□□ -0.08
PVT1-223ENST00000615442 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
PVT1-223ENST00000615442 BRD4O60885 1362 aaPredicted RBP14.57□□□□□ -0.08
PVT1-223ENST00000615442 CPSF1Q10570 1443 aaKnown RBP14.57□□□□□ -0.08
PVT1-223ENST00000615442 PXDNQ92626 1479 aa14.57□□□□□ -0.08
PVT1-223ENST00000615442 NHSL1Q5SYE7 1610 aa14.56□□□□□ -0.08
PVT1-223ENST00000615442 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
PVT1-223ENST00000615442 POLR3GLQ9BT43 218 aa14.56□□□□□ -0.08
PVT1-223ENST00000615442 SPATA31A3Q5VYP0 1347 aa14.54□□□□□ -0.08
PVT1-223ENST00000615442 PHLPP1O60346 1717 aa14.54□□□□□ -0.08
PVT1-223ENST00000615442 COL16A1Q07092 1604 aaPredicted RBP14.53□□□□□ -0.08
PVT1-223ENST00000615442 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
PVT1-223ENST00000615442 USP6P35125 1406 aa14.53□□□□□ -0.08
PVT1-223ENST00000615442 KTN1Q86UP2 1357 aaKnown RBP14.53□□□□□ -0.08
PVT1-223ENST00000615442 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
PVT1-223ENST00000615442 CCDC7Q96M83 1385 aa14.53□□□□□ -0.08
PVT1-223ENST00000615442 JCADQ9P266 1359 aa14.53□□□□□ -0.08
PVT1-223ENST00000615442 WASHC2AQ641Q2 1341 aa14.53□□□□□ -0.08
PVT1-223ENST00000615442 SSH2Q76I76 1423 aa14.52□□□□□ -0.08
PVT1-223ENST00000615442 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
PVT1-223ENST00000615442 A0A1W2PP64 1363 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms