RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
PCDH9-205ENST00000614931 PTCH1Q13635 1447 aa11.41□□□□□ -0.58
PCDH9-205ENST00000614931 ADGRL3Q9HAR2 1447 aa11.41□□□□□ -0.58
PCDH9-205ENST00000614931 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
PCDH9-205ENST00000614931 AHDC1Q5TGY3 1603 aaPredicted RBP11.4□□□□□ -0.58
PCDH9-205ENST00000614931 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
PCDH9-205ENST00000614931 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
PCDH9-205ENST00000614931 MST1RQ04912 1400 aa11.4□□□□□ -0.58
PCDH9-205ENST00000614931 USP47Q96K76 1375 aa11.4□□□□□ -0.59
PCDH9-205ENST00000614931 ROBO2Q9HCK4 1378 aa11.4□□□□□ -0.59
PCDH9-205ENST00000614931 QRICH2Q9H0J4 1663 aa11.4□□□□□ -0.59
PCDH9-205ENST00000614931 BRINP3Q76B58 766 aa11.39□□□□□ -0.59
PCDH9-205ENST00000614931 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
PCDH9-205ENST00000614931 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
PCDH9-205ENST00000614931 TMEM132EQ6IEE7 984 aa11.38□□□□□ -0.59
PCDH9-205ENST00000614931 JCADQ9P266 1359 aa11.38□□□□□ -0.59
PCDH9-205ENST00000614931 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
PCDH9-205ENST00000614931 YTHDC2Q9H6S0 1430 aaKnown RBP11.36□□□□□ -0.59
PCDH9-205ENST00000614931 EIF4G2P78344 907 aaKnown RBP eCLIP11.36□□□□□ -0.599e-10■■■■■ 41.2
PCDH9-205ENST00000614931 TECPR2O15040 1411 aa11.35□□□□□ -0.59
PCDH9-205ENST00000614931 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
PCDH9-205ENST00000614931 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
PCDH9-205ENST00000614931 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
PCDH9-205ENST00000614931 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
PCDH9-205ENST00000614931 SHPRHQ149N8 1683 aa11.34□□□□□ -0.59
PCDH9-205ENST00000614931 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
PCDH9-205ENST00000614931 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
PCDH9-205ENST00000614931 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
PCDH9-205ENST00000614931 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
PCDH9-205ENST00000614931 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
PCDH9-205ENST00000614931 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
PCDH9-205ENST00000614931 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
PCDH9-205ENST00000614931 STK26Q9P289 416 aa11.32□□□□□ -0.6
PCDH9-205ENST00000614931 CDC42BPGQ6DT37 1551 aa11.32□□□□□ -0.6
PCDH9-205ENST00000614931 LRP6O75581 1613 aa11.31□□□□□ -0.6
PCDH9-205ENST00000614931 PLEKHH1Q9ULM0 1364 aa11.31□□□□□ -0.6
PCDH9-205ENST00000614931 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
PCDH9-205ENST00000614931 TESK2Q96S53 571 aa11.31□□□□□ -0.6
PCDH9-205ENST00000614931 MYOM1P52179 1685 aa11.3□□□□□ -0.6
PCDH9-205ENST00000614931 TULP4Q9NRJ4 1543 aa11.3□□□□□ -0.6
PCDH9-205ENST00000614931 DDX17Q92841 729 aaKnown RBP11.3□□□□□ -0.6
PCDH9-205ENST00000614931 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
PCDH9-205ENST00000614931 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
PCDH9-205ENST00000614931 EIF3AQ14152 1382 aaKnown RBP11.29□□□□□ -0.6
PCDH9-205ENST00000614931 POTEAQ6S8J7 498 aa11.29□□□□□ -0.6
PCDH9-205ENST00000614931 CENPJQ9HC77 1338 aaPredicted RBP11.29□□□□□ -0.6
PCDH9-205ENST00000614931 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-205ENST00000614931 WASHC2AQ641Q2 1341 aa11.28□□□□□ -0.6
PCDH9-205ENST00000614931 CCDC7Q96M83 1385 aa11.28□□□□□ -0.6
PCDH9-205ENST00000614931 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
PCDH9-205ENST00000614931 ADGRB2O60241 1585 aa11.27□□□□□ -0.61
PCDH9-205ENST00000614931 KIF7Q2M1P5 1343 aa11.27□□□□□ -0.61
PCDH9-205ENST00000614931 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.61
PCDH9-205ENST00000614931 FMN2Q9NZ56 1722 aa11.26□□□□□ -0.61
PCDH9-205ENST00000614931 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCDH9-205ENST00000614931 PRAM1Q96QH2 718 aa11.26□□□□□ -0.61
PCDH9-205ENST00000614931 NUTM2BA6NNL0 878 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-205ENST00000614931 NUTM2EB1AL46 878 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-205ENST00000614931 ESCO1Q5FWF5 840 aa11.25□□□□□ -0.61
PCDH9-205ENST00000614931 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
PCDH9-205ENST00000614931 NUTM2AQ8IVF1 878 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-205ENST00000614931 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
PCDH9-205ENST00000614931 NPHP3Q7Z494 1330 aa11.24□□□□□ -0.61
PCDH9-205ENST00000614931 PXDNQ92626 1479 aa11.24□□□□□ -0.61
PCDH9-205ENST00000614931 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
PCDH9-205ENST00000614931 ZNF772Q68DY9 489 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-205ENST00000614931 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-205ENST00000614931 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
PCDH9-205ENST00000614931 COL22A1Q8NFW1 1626 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-205ENST00000614931 FOXO3O43524 673 aa11.22□□□□□ -0.61
PCDH9-205ENST00000614931 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
PCDH9-205ENST00000614931 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
PCDH9-205ENST00000614931 POGKQ9P215 609 aa11.22□□□□□ -0.61
PCDH9-205ENST00000614931 TMF1P82094 1093 aa11.21□□□□□ -0.61
PCDH9-205ENST00000614931 AFF2P51816 1311 aa11.2□□□□□ -0.62
PCDH9-205ENST00000614931 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
PCDH9-205ENST00000614931 POLR3GLQ9BT43 218 aa11.19□□□□□ -0.62
PCDH9-205ENST00000614931 ATP7BP35670 1465 aa11.19□□□□□ -0.62
PCDH9-205ENST00000614931 ANKARQ7Z5J8 1434 aa11.18□□□□□ -0.62
PCDH9-205ENST00000614931 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
PCDH9-205ENST00000614931 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
PCDH9-205ENST00000614931 C8orf37Q96NL8 207 aa11.18□□□□□ -0.62
PCDH9-205ENST00000614931 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
PCDH9-205ENST00000614931 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
PCDH9-205ENST00000614931 SPATA31A3Q5VYP0 1347 aa11.17□□□□□ -0.62
PCDH9-205ENST00000614931 EVC2Q86UK5 1308 aa11.17□□□□□ -0.62
PCDH9-205ENST00000614931 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
PCDH9-205ENST00000614931 RXRBP28702 533 aa11.17□□□□□ -0.62
PCDH9-205ENST00000614931 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
PCDH9-205ENST00000614931 PRR36Q9H6K5 1346 aa11.16□□□□□ -0.62
PCDH9-205ENST00000614931 NGLY1Q96IV0 654 aa11.16□□□□□ -0.62
PCDH9-205ENST00000614931 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
PCDH9-205ENST00000614931 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
PCDH9-205ENST00000614931 CDK12Q9NYV4 1490 aaPredicted RBP11.16□□□□□ -0.62
PCDH9-205ENST00000614931 MARF1Q9Y4F3 1742 aaKnown RBP11.15□□□□□ -0.62
PCDH9-205ENST00000614931 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
PCDH9-205ENST00000614931 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
PCDH9-205ENST00000614931 PSME1Q06323 249 aa11.15□□□□□ -0.62
PCDH9-205ENST00000614931 FNBP4Q8N3X1 1017 aaPredicted RBP11.15□□□□□ -0.62
PCDH9-205ENST00000614931 QTRT2Q9H974 415 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms