RNA–Protein interactions for RNA: ENST00000614721.1

ACSM3-215, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best)

Gene ACSM3, Length 3,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-215ENST00000614721 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
ACSM3-215ENST00000614721 KCNA6P17658 529 aa11.63□□□□□ -0.55
ACSM3-215ENST00000614721 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
ACSM3-215ENST00000614721 SUPT16HQ9Y5B9 1047 aaKnown RBP11.62□□□□□ -0.55
ACSM3-215ENST00000614721 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
ACSM3-215ENST00000614721 IQGAP1P46940 1657 aa11.61□□□□□ -0.55
ACSM3-215ENST00000614721 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
ACSM3-215ENST00000614721 ADAMTS8Q9UP79 889 aa11.61□□□□□ -0.55
ACSM3-215ENST00000614721 ASXL1Q8IXJ9 1541 aa11.61□□□□□ -0.55
ACSM3-215ENST00000614721 PTPRMP28827 1452 aa11.61□□□□□ -0.55
ACSM3-215ENST00000614721 WDR43Q15061 677 aaKnown RBP eCLIP11.61□□□□□ -0.551e-6■□□□□ 11.1
ACSM3-215ENST00000614721 FKBP8Q14318 412 aa11.6□□□□□ -0.55
ACSM3-215ENST00000614721 NUTM2GQ5VZR2 741 aa11.6□□□□□ -0.55
ACSM3-215ENST00000614721 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
ACSM3-215ENST00000614721 ROBO2Q9HCK4 1378 aa11.6□□□□□ -0.55
ACSM3-215ENST00000614721 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
ACSM3-215ENST00000614721 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
ACSM3-215ENST00000614721 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
ACSM3-215ENST00000614721 FER1L4A9Z1Z3 1794 aa11.59□□□□□ -0.55
ACSM3-215ENST00000614721 RIMS1Q86UR5 1692 aaKnown RBP11.59□□□□□ -0.55
ACSM3-215ENST00000614721 MTHFSP49914 203 aa11.58□□□□□ -0.55
ACSM3-215ENST00000614721 PARD3Q8TEW0 1356 aa11.58□□□□□ -0.56
ACSM3-215ENST00000614721 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
ACSM3-215ENST00000614721 A0A1W2PP64 1363 aa11.58□□□□□ -0.56
ACSM3-215ENST00000614721 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
ACSM3-215ENST00000614721 TERF2IPQ9NYB0 399 aa11.58□□□□□ -0.56
ACSM3-215ENST00000614721 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
ACSM3-215ENST00000614721 C3P01024 1663 aa11.57□□□□□ -0.56
ACSM3-215ENST00000614721 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
ACSM3-215ENST00000614721 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
ACSM3-215ENST00000614721 LRPPRCP42704 1394 aaKnown RBP11.57□□□□□ -0.56
ACSM3-215ENST00000614721 XPCQ01831 940 aaPredicted RBP11.57□□□□□ -0.56
ACSM3-215ENST00000614721 NME9Q86XW9 330 aa11.57□□□□□ -0.56
ACSM3-215ENST00000614721 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
ACSM3-215ENST00000614721 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
ACSM3-215ENST00000614721 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
ACSM3-215ENST00000614721 POLR1AO95602 1720 aaPredicted RBP11.56□□□□□ -0.56
ACSM3-215ENST00000614721 ZBTB7CA1YPR0 619 aa11.56□□□□□ -0.56
ACSM3-215ENST00000614721 QRICH2Q9H0J4 1663 aa11.56□□□□□ -0.56
ACSM3-215ENST00000614721 ADAMTS13Q76LX8 1427 aa11.56□□□□□ -0.56
ACSM3-215ENST00000614721 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
ACSM3-215ENST00000614721 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
ACSM3-215ENST00000614721 LAMC1P11047 1609 aa11.55□□□□□ -0.56
ACSM3-215ENST00000614721 FYB1O15117 783 aa11.55□□□□□ -0.56
ACSM3-215ENST00000614721 PRR36Q9H6K5 1346 aa11.55□□□□□ -0.56
ACSM3-215ENST00000614721 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
ACSM3-215ENST00000614721 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
ACSM3-215ENST00000614721 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
ACSM3-215ENST00000614721 RRS1Q15050 365 aaKnown RBP11.54□□□□□ -0.56
ACSM3-215ENST00000614721 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
ACSM3-215ENST00000614721 NLRP1Q9C000 1473 aa11.54□□□□□ -0.56
ACSM3-215ENST00000614721 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
ACSM3-215ENST00000614721 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
ACSM3-215ENST00000614721 PTPRUQ92729 1446 aa11.53□□□□□ -0.56
ACSM3-215ENST00000614721 NEFLP07196 543 aa11.53□□□□□ -0.56
ACSM3-215ENST00000614721 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
ACSM3-215ENST00000614721 APAF1O14727 1248 aa11.53□□□□□ -0.56
ACSM3-215ENST00000614721 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
ACSM3-215ENST00000614721 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
ACSM3-215ENST00000614721 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
ACSM3-215ENST00000614721 TBX22Q9Y458 520 aa11.53□□□□□ -0.56
ACSM3-215ENST00000614721 PLEKHG1Q9ULL1 1385 aa11.52□□□□□ -0.56
ACSM3-215ENST00000614721 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
ACSM3-215ENST00000614721 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
ACSM3-215ENST00000614721 PPIP5K1Q6PFW1 1433 aa11.51□□□□□ -0.57
ACSM3-215ENST00000614721 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
ACSM3-215ENST00000614721 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
ACSM3-215ENST00000614721 ANKRD36BQ8N2N9 1353 aa11.51□□□□□ -0.57
ACSM3-215ENST00000614721 ACEP12821 1306 aa11.51□□□□□ -0.57
ACSM3-215ENST00000614721 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
ACSM3-215ENST00000614721 ESCO1Q5FWF5 840 aa11.5□□□□□ -0.57
ACSM3-215ENST00000614721 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
ACSM3-215ENST00000614721 ZBED9Q6R2W3 1325 aa11.5□□□□□ -0.57
ACSM3-215ENST00000614721 FOXO3O43524 673 aa11.48□□□□□ -0.57
ACSM3-215ENST00000614721 HMOX1P09601 288 aa11.48□□□□□ -0.57
ACSM3-215ENST00000614721 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
ACSM3-215ENST00000614721 NRXN3Q9Y4C0 1643 aa11.48□□□□□ -0.57
ACSM3-215ENST00000614721 MYOM1P52179 1685 aa11.48□□□□□ -0.57
ACSM3-215ENST00000614721 CEP170BQ9Y4F5 1589 aaPredicted RBP11.47□□□□□ -0.57
ACSM3-215ENST00000614721 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
ACSM3-215ENST00000614721 ORAI2Q96SN7 254 aa11.47□□□□□ -0.57
ACSM3-215ENST00000614721 COG3Q96JB2 828 aa11.47□□□□□ -0.57
ACSM3-215ENST00000614721 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
ACSM3-215ENST00000614721 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
ACSM3-215ENST00000614721 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
ACSM3-215ENST00000614721 NLRP6P59044 892 aa11.45□□□□□ -0.58
ACSM3-215ENST00000614721 PLIN1O60240 522 aa11.45□□□□□ -0.58
ACSM3-215ENST00000614721 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
ACSM3-215ENST00000614721 ABTB2Q8N961 1025 aa11.44□□□□□ -0.58
ACSM3-215ENST00000614721 PSME1Q06323 249 aa11.43□□□□□ -0.58
ACSM3-215ENST00000614721 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
ACSM3-215ENST00000614721 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
ACSM3-215ENST00000614721 CD163L1Q9NR16 1453 aa11.43□□□□□ -0.58
ACSM3-215ENST00000614721 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
ACSM3-215ENST00000614721 NUDCQ9Y266 331 aa11.42□□□□□ -0.58
ACSM3-215ENST00000614721 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
ACSM3-215ENST00000614721 NPHP4O75161 1426 aaPredicted RBP11.42□□□□□ -0.58
ACSM3-215ENST00000614721 TTC21BQ7Z4L5 1316 aa11.42□□□□□ -0.58
ACSM3-215ENST00000614721 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
ACSM3-215ENST00000614721 DIAPH1O60610 1272 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms