RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
SCAMP1-205ENST00000614488 PCDHGC3Q9UN70 934 aa11.47□□□□□ -0.57
SCAMP1-205ENST00000614488 MSS51Q4VC12 460 aa11.46□□□□□ -0.57
SCAMP1-205ENST00000614488 GGCXP38435 758 aa11.45□□□□□ -0.58
SCAMP1-205ENST00000614488 CLK2P49760 499 aaKnown RBP11.45□□□□□ -0.58
SCAMP1-205ENST00000614488 SLC6A16Q9GZN6 736 aa11.45□□□□□ -0.58
SCAMP1-205ENST00000614488 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
SCAMP1-205ENST00000614488 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
SCAMP1-205ENST00000614488 PRPF38BQ5VTL8 546 aaKnown RBP11.43□□□□□ -0.58
SCAMP1-205ENST00000614488 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
SCAMP1-205ENST00000614488 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
SCAMP1-205ENST00000614488 GOPCQ9HD26 462 aa11.43□□□□□ -0.58
SCAMP1-205ENST00000614488 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
SCAMP1-205ENST00000614488 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
SCAMP1-205ENST00000614488 FAM160A2Q8N612 972 aaPredicted RBP11.42□□□□□ -0.58
SCAMP1-205ENST00000614488 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
SCAMP1-205ENST00000614488 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
SCAMP1-205ENST00000614488 C6orf229H3BNL8 230 aa11.41□□□□□ -0.58
SCAMP1-205ENST00000614488 S1PR4O95977 384 aa11.41□□□□□ -0.58
SCAMP1-205ENST00000614488 MTMR2Q13614 643 aa11.41□□□□□ -0.58
SCAMP1-205ENST00000614488 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
SCAMP1-205ENST00000614488 PCDHB15Q9Y5E8 787 aa11.41□□□□□ -0.58
SCAMP1-205ENST00000614488 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
SCAMP1-205ENST00000614488 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
SCAMP1-205ENST00000614488 MMP16P51512 607 aa11.38□□□□□ -0.59
SCAMP1-205ENST00000614488 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
SCAMP1-205ENST00000614488 LILRB3O75022 631 aa11.37□□□□□ -0.59
SCAMP1-205ENST00000614488 RGS20O76081 388 aa11.37□□□□□ -0.59
SCAMP1-205ENST00000614488 HRCP23327 699 aa11.37□□□□□ -0.59
SCAMP1-205ENST00000614488 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
SCAMP1-205ENST00000614488 PRDM9Q9NQV7 894 aa11.37□□□□□ -0.59
SCAMP1-205ENST00000614488 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
SCAMP1-205ENST00000614488 CSPP1Q1MSJ5 1256 aa11.36□□□□□ -0.59
SCAMP1-205ENST00000614488 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
SCAMP1-205ENST00000614488 JUNDP17535 347 aa11.35□□□□□ -0.59
SCAMP1-205ENST00000614488 PRR7Q8TB68 274 aa11.35□□□□□ -0.59
SCAMP1-205ENST00000614488 QPCTQ16769 361 aa11.34□□□□□ -0.59
SCAMP1-205ENST00000614488 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
SCAMP1-205ENST00000614488 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
SCAMP1-205ENST00000614488 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
SCAMP1-205ENST00000614488 NUTM2BA6NNL0 878 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-205ENST00000614488 NUTM2EB1AL46 878 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-205ENST00000614488 NUTM2DQ5VT03 806 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-205ENST00000614488 NUTM2AQ8IVF1 878 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-205ENST00000614488 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-205ENST00000614488 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
SCAMP1-205ENST00000614488 PPP2R2DQ66LE6 453 aa11.31□□□□□ -0.6
SCAMP1-205ENST00000614488 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
SCAMP1-205ENST00000614488 FCF1Q9Y324 198 aaKnown RBP11.3□□□□□ -0.6
SCAMP1-205ENST00000614488 PTPRNQ16849 979 aa11.28□□□□□ -0.6
SCAMP1-205ENST00000614488 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
SCAMP1-205ENST00000614488 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
SCAMP1-205ENST00000614488 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
SCAMP1-205ENST00000614488 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
SCAMP1-205ENST00000614488 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
SCAMP1-205ENST00000614488 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
SCAMP1-205ENST00000614488 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
SCAMP1-205ENST00000614488 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
SCAMP1-205ENST00000614488 LYPD8Q6UX82 237 aa11.24□□□□□ -0.61
SCAMP1-205ENST00000614488 PRKD2Q9BZL6 878 aa11.24□□□□□ -0.61
SCAMP1-205ENST00000614488 RPIAP49247 311 aa11.23□□□□□ -0.61
SCAMP1-205ENST00000614488 EMID1Q96A84 441 aaPredicted RBP11.23□□□□□ -0.61
SCAMP1-205ENST00000614488 RFC5P40937 340 aa11.22□□□□□ -0.61
SCAMP1-205ENST00000614488 SLC19A1P41440 591 aa11.22□□□□□ -0.61
SCAMP1-205ENST00000614488 TSC1Q92574 1164 aa11.22□□□□□ -0.61
SCAMP1-205ENST00000614488 LIAT1Q6ZQX7 453 aa11.21□□□□□ -0.61
SCAMP1-205ENST00000614488 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
SCAMP1-205ENST00000614488 EVA1BQ9NVM1 165 aa11.2□□□□□ -0.62
SCAMP1-205ENST00000614488 ZBTB24O43167 697 aaPredicted RBP11.19□□□□□ -0.62
SCAMP1-205ENST00000614488 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
SCAMP1-205ENST00000614488 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
SCAMP1-205ENST00000614488 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
SCAMP1-205ENST00000614488 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
SCAMP1-205ENST00000614488 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
SCAMP1-205ENST00000614488 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
SCAMP1-205ENST00000614488 AP1G2O75843 785 aa11.16□□□□□ -0.62
SCAMP1-205ENST00000614488 CTDSPL2Q05D32 466 aa11.16□□□□□ -0.62
SCAMP1-205ENST00000614488 TRIM32Q13049 653 aa11.15□□□□□ -0.62
SCAMP1-205ENST00000614488 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
SCAMP1-205ENST00000614488 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
SCAMP1-205ENST00000614488 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
SCAMP1-205ENST00000614488 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
SCAMP1-205ENST00000614488 CTHP32929 405 aa11.13□□□□□ -0.63
SCAMP1-205ENST00000614488 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
SCAMP1-205ENST00000614488 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
SCAMP1-205ENST00000614488 BANK1Q8NDB2 785 aa11.12□□□□□ -0.63
SCAMP1-205ENST00000614488 MAP10Q9P2G4 905 aa11.12□□□□□ -0.63
SCAMP1-205ENST00000614488 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
SCAMP1-205ENST00000614488 WNT7BP56706 349 aa11.1□□□□□ -0.63
SCAMP1-205ENST00000614488 SOCS7O14512 581 aa11.09□□□□□ -0.63
SCAMP1-205ENST00000614488 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
SCAMP1-205ENST00000614488 SKOR1P84550 965 aa11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 PRR20EP86478 221 aa11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 PRR20CP86479 221 aa11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 PRR20DP86480 221 aa11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 PRR20BP86481 221 aa11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 PRR20AP86496 221 aa11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 HMX1Q9NP08 348 aaPredicted RBP11.05□□□□□ -0.64
SCAMP1-205ENST00000614488 WNT7AO00755 349 aa11.04□□□□□ -0.64
SCAMP1-205ENST00000614488 GDF9O60383 454 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms